DK943591
Clone id YMU02A01NGRL0003_F03
Library
Length 229
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_F03. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
GCTAAAAAGCCAGAGACATTTCGATAAATACAGCTCAAGTAGGGTTCAGTTGAGTGAAGA
GCATAATCATGTTAGCCATGGAATTCTGACATTAATAAACATAGTGCCCATGATACTCTT
ATTTTCTACATAAATATGGTTGAACTTGTATGGACTTTTGTGTATTTTGCTGCTTGTTCT
AATGATGTGCAAATTGTTTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9B6D8
Definition sp|Q9B6D8|COX3_YARLI Cytochrome c oxidase subunit 3 OS=Yarrowia lipolytica
Align length 24
Score (bit) 29.3
E-value 6.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943591|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_F03, 5'
(201 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9B6D8|COX3_YARLI Cytochrome c oxidase subunit 3 OS=Yarrowia ... 29 6.4

>sp|Q9B6D8|COX3_YARLI Cytochrome c oxidase subunit 3 OS=Yarrowia
lipolytica GN=COX3 PE=3 SV=1
Length = 268

Score = 29.3 bits (64), Expect = 6.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1

Query: 94 NKHSAHDTLIFYINMVELVWTFVY 165
N H ++T I Y + V++VW F+Y
Sbjct: 237 NHHVGYETSILYYHFVDVVWLFLY 260


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943591|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_F03, 5'
(201 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******