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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK943619
Clone id YMU02A01NGRL0003_G14
Library
Length 491
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_G14. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence 
ACTGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGGCGTCTGGATGGGGCATACATGGC
GTCAAAGGCCGTTGCTTCGACCTGTGGATGGACTTCAGCGATTGTATGTCCAACTGCACT
ACTCCCTCTGAATGCTTTCCCCTTCGCGAGGACTACTTTGAATGCCTCCACCATCGAAAA
GAGATATGCTGTAACTGCGGACGATTACTTTCTTTTAAGAAGACGTGATGTCACAAACTG
CTGACGTGTCAAGCCACTGAAGAACGGAGCAGAAGAAGTTTACCAACTCGCAAAGCCTTG
CCGAGAGGCTTATTTCTAAAGAGGAATTCTTGCCGACTTATGGGACCACGTTCGATGGGG
CCCAAGTGACACTCATGACAAATTCGGAGCAATTACAGCTTCAGAATGAACCCAATCACG
ATTATGAATCTTGAATGATGATGATGAATGATTGAATGAATCAAAAAAAAAAAAAAAAAA
AAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id A4YD78
Definition sp|A4YD78|RL40_METS5 50S ribosomal protein L40e OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348)
Align length 41
Score (bit) 32.3
E-value 1.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943619|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_G14, 5'
         (462 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A4YD78|RL40_METS5 50S ribosomal protein L40e OS=Metallosphaer...    32   1.0  
sp|O07509|PROJ_BACSU Glutamate 5-kinase 2 OS=Bacillus subtilis G...    32   1.3  
sp|Q9V9S7|SYDE_DROME Rho GTPase-activating protein 100F OS=Droso...    30   6.7  
sp|O61460|VAB1_CAEEL Ephrin receptor 1 OS=Caenorhabditis elegans...    29   8.5  
sp|A6NEL2|ANR56_HUMAN Ankyrin repeat domain-containing protein 5...    29   8.7  

>sp|A4YD78|RL40_METS5 50S ribosomal protein L40e OS=Metallosphaera
           sedula (strain ATCC 51363 / DSM 5348) GN=rpl40e PE=3
           SV=1
          Length = 56

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +1

Query: 178 KEICCNCGRLLSFKKT*CHKLLTCQATEER-SRRSLPTRKA 297
           K++C NCG L S + T C +   C +T  R  ++ LPT++A
Sbjct: 19  KKVCRNCGALNSIRATKCRR---CHSTNLRPKKKELPTKRA 56


>sp|O07509|PROJ_BACSU Glutamate 5-kinase 2 OS=Bacillus subtilis
           GN=proJ PE=3 SV=1
          Length = 371

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = -1

Query: 192 TAYLFSMVEAFKVVLAKG-KAFRGSSAVGHTIAE-VHPQVEATAFDA 58
           T  + S ++AFK+V+A G K F G +  G  +   VH Q E T F+A
Sbjct: 214 TGGMRSKLDAFKIVMASGIKGFLGQADAGDILYHAVHEQAEGTYFEA 260


>sp|Q9V9S7|SYDE_DROME Rho GTPase-activating protein 100F OS=Drosophila
            melanogaster GN=RhoGAP100F PE=1 SV=1
          Length = 1844

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = -1

Query: 153  VLAKGKAFRGSSAVGHTIAEVHPQVEATAFDAMY 52
            ++A G   R S++V + +++ HPQ+ ATA + +Y
Sbjct: 1193 LMAAGNLLRSSTSVTNILSQGHPQLSATANNHLY 1226


>sp|O61460|VAB1_CAEEL Ephrin receptor 1 OS=Caenorhabditis elegans
           GN=vab-1 PE=1 SV=1
          Length = 1122

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = +3

Query: 33  DGVWMGHTWRQRPLLRPVDGLQRLYVQLHYSL*MLSPSRGL 155
           D VWM  TWR           QR YV  +Y   M++PS  L
Sbjct: 56  DDVWMEETWRNPAATDEKHANQRAYVTCNYD--MINPSNWL 94


>sp|A6NEL2|ANR56_HUMAN Ankyrin repeat domain-containing protein 56
           OS=Homo sapiens GN=ANKRD56 PE=2 SV=1
          Length = 793

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -1

Query: 429 IHNRDWVHSEAVIAPNLS*VSLGPHRTWSHKSARIPL 319
           +  R W HS  V +   S  +L PHRT  HKS+ +PL
Sbjct: 558 VAERGWRHSLWVPSGEGS-AALAPHRTSEHKSSLVPL 593
tr_hit_id A9NTG6
Definition tr|A9NTG6|A9NTG6_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 50
Score (bit) 92.0
E-value 1.0e-17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943619|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_G14, 5'
         (462 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NTG6|A9NTG6_PICSI Putative uncharacterized protein OS=Picea...    92   1e-17
tr|A9RII1|A9RII1_PHYPA Predicted protein (Fragment) OS=Physcomit...    91   3e-17
tr|A9RD10|A9RD10_PHYPA Predicted protein OS=Physcomitrella paten...    91   3e-17
tr|B3H4P7|B3H4P7_ARATH Uncharacterized protein At2g47690.2 OS=Ar...    90   6e-17
tr|Q9LZI6|Q9LZI6_ARATH Putative uncharacterized protein F26K9_22...    89   1e-16
tr|Q8L9F7|Q8L9F7_ARATH Putative uncharacterized protein OS=Arabi...    89   1e-16
tr|Q0WRL8|Q0WRL8_ARATH Putative uncharacterized protein At2g4769...    89   1e-16
tr|O82238|O82238_ARATH Putative uncharacterized protein At2g4769...    89   1e-16
tr|Q6ZJ19|Q6ZJ19_ORYSJ Os08g0556600 protein OS=Oryza sativa subs...    88   2e-16
tr|A2YY10|A2YY10_ORYSI Putative uncharacterized protein OS=Oryza...    88   2e-16
tr|B6SPR5|B6SPR5_MAIZE Fb14 OS=Zea mays PE=4 SV=1                      88   2e-16
tr|B0LUW2|B0LUW2_CAMSI NADH-ubiquinone oxidoreductase-like prote...    88   2e-16
tr|A9P8Y5|A9P8Y5_POPTR Putative uncharacterized protein OS=Popul...    88   2e-16
tr|Q7X9S6|Q7X9S6_GOSBA Fiber protein Fb14 OS=Gossypium barbadens...    87   3e-16
tr|Q4TZT1|Q4TZT1_GOSHI Fb14 OS=Gossypium hirsutum PE=4 SV=1            87   3e-16
tr|A8QBL8|A8QBL8_MALGO Putative uncharacterized protein OS=Malas...    68   2e-10
tr|A4S5C5|A4S5C5_OSTLU Predicted protein OS=Ostreococcus lucimar...    65   1e-09
tr|Q4P1G2|Q4P1G2_USTMA Putative uncharacterized protein OS=Ustil...    65   2e-09
tr|Q5KD82|Q5KD82_CRYNE Putative uncharacterized protein OS=Crypt...    64   3e-09
tr|Q00YA2|Q00YA2_OSTTA NADH-ubiquinone oxidoreductase-related (I...    60   5e-08
tr|B0DBK0|B0DBK0_LACBS Predicted protein OS=Laccaria bicolor (st...    60   7e-08
tr|A8NCB7|A8NCB7_COPC7 Predicted protein OS=Coprinopsis cinerea ...    59   1e-07
tr|Q2HBE3|Q2HBE3_CHAGB Putative uncharacterized protein OS=Chaet...    57   5e-07
tr|A6RZ64|A6RZ64_BOTFB Putative uncharacterized protein OS=Botry...    56   1e-06
tr|B8NRY0|B8NRY0_ASPFL Putative uncharacterized protein OS=Asper...    55   1e-06
tr|B2VX24|B2VX24_PYRTR NADH:ubiquinone oxidoreductase 11.5kD sub...    55   1e-06
tr|Q0U8N1|Q0U8N1_PHANO Putative uncharacterized protein OS=Phaeo...    54   3e-06
tr|B2B6S4|B2B6S4_PODAN Predicted CDS Pa_2_8690 OS=Podospora anse...    54   4e-06
tr|Q9P6T9|Q9P6T9_NEUCR Putative uncharacterized protein 15E6.140...    53   7e-06
tr|A6QS29|A6QS29_AJECN Predicted protein OS=Ajellomyces capsulat...    53   7e-06

>tr|A9NTG6|A9NTG6_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=4 SV=1
          Length = 82

 Score = 92.0 bits (227), Expect = 1e-17
 Identities = 37/50 (74%), Positives = 40/50 (80%)
 Frame = +1

Query: 34  MASGWGIHGVKGRCFDLWMDFSDCMSNCTTPSECFPLREDYFECLHHRKE 183
           MASGWGI G KGRC+D WMDFS+C S C  P +C PLREDYFECLHH KE
Sbjct: 1   MASGWGITGSKGRCYDFWMDFSECFSRCKEPRDCAPLREDYFECLHHGKE 50


>tr|A9RII1|A9RII1_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_54488 PE=4 SV=1
          Length = 64

 Score = 90.9 bits (224), Expect = 3e-17
 Identities = 36/50 (72%), Positives = 44/50 (88%)
 Frame = +1

Query: 34  MASGWGIHGVKGRCFDLWMDFSDCMSNCTTPSECFPLREDYFECLHHRKE 183
           MASG+G+ G KGRC+D+WMDFSDCMS+C+ P+EC   R+DYFECLHHRKE
Sbjct: 1   MASGFGVTGKKGRCYDVWMDFSDCMSHCSMPAECTSRRDDYFECLHHRKE 50


>tr|A9RD10|A9RD10_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_111553 PE=4 SV=1
          Length = 80

 Score = 90.9 bits (224), Expect = 3e-17
 Identities = 36/50 (72%), Positives = 44/50 (88%)
 Frame = +1

Query: 34  MASGWGIHGVKGRCFDLWMDFSDCMSNCTTPSECFPLREDYFECLHHRKE 183
           MASG+G+ G KGRC+D+WMDFSDCMS+C+ P+EC   R+DYFECLHHRKE
Sbjct: 1   MASGFGVTGKKGRCYDVWMDFSDCMSHCSMPAECTSRRDDYFECLHHRKE 50


>tr|B3H4P7|B3H4P7_ARATH Uncharacterized protein At2g47690.2
           OS=Arabidopsis thaliana GN=At2g47690 PE=4 SV=1
          Length = 99

 Score = 89.7 bits (221), Expect = 6e-17
 Identities = 36/51 (70%), Positives = 41/51 (80%)
 Frame = +1

Query: 34  MASGWGIHGVKGRCFDLWMDFSDCMSNCTTPSECFPLREDYFECLHHRKEI 186
           MASGWGI G KGRC+D WMDFS+CMS+C  P +C  LREDY ECLHH KE+
Sbjct: 36  MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEV 86


>tr|Q9LZI6|Q9LZI6_ARATH Putative uncharacterized protein F26K9_220
           OS=Arabidopsis thaliana GN=F26K9_220 PE=2 SV=1
          Length = 83

 Score = 88.6 bits (218), Expect = 1e-16
 Identities = 36/50 (72%), Positives = 40/50 (80%)
 Frame = +1

Query: 34  MASGWGIHGVKGRCFDLWMDFSDCMSNCTTPSECFPLREDYFECLHHRKE 183
           MASGWGI G KGRC+D WMDFS+CMS+C  P +C  LREDY ECLHH KE
Sbjct: 1   MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKE 50


>tr|Q8L9F7|Q8L9F7_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana PE=4 SV=1
          Length = 83

 Score = 88.6 bits (218), Expect = 1e-16
 Identities = 36/50 (72%), Positives = 40/50 (80%)
 Frame = +1

Query: 34  MASGWGIHGVKGRCFDLWMDFSDCMSNCTTPSECFPLREDYFECLHHRKE 183
           MASGWGI G KGRC+D WMDFS+CMS+C  P +C  LREDY ECLHH KE
Sbjct: 1   MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKE 50


>tr|Q0WRL8|Q0WRL8_ARATH Putative uncharacterized protein At2g47690
           (Fragment) OS=Arabidopsis thaliana GN=At2g47690 PE=2
           SV=1
          Length = 91

 Score = 88.6 bits (218), Expect = 1e-16
 Identities = 36/50 (72%), Positives = 40/50 (80%)
 Frame = +1

Query: 34  MASGWGIHGVKGRCFDLWMDFSDCMSNCTTPSECFPLREDYFECLHHRKE 183
           MASGWGI G KGRC+D WMDFS+CMS+C  P +C  LREDY ECLHH KE
Sbjct: 9   MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKE 58


>tr|O82238|O82238_ARATH Putative uncharacterized protein At2g47690
           OS=Arabidopsis thaliana GN=At2g47690 PE=2 SV=1
          Length = 118

 Score = 88.6 bits (218), Expect = 1e-16
 Identities = 36/50 (72%), Positives = 40/50 (80%)
 Frame = +1

Query: 34  MASGWGIHGVKGRCFDLWMDFSDCMSNCTTPSECFPLREDYFECLHHRKE 183
           MASGWGI G KGRC+D WMDFS+CMS+C  P +C  LREDY ECLHH KE
Sbjct: 36  MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKE 85


>tr|Q6ZJ19|Q6ZJ19_ORYSJ Os08g0556600 protein OS=Oryza sativa subsp.
           japonica GN=OJ1150_A11.14 PE=4 SV=1
          Length = 90

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 35/50 (70%), Positives = 41/50 (82%)
 Frame = +1

Query: 34  MASGWGIHGVKGRCFDLWMDFSDCMSNCTTPSECFPLREDYFECLHHRKE 183
           MASGWGI+G KGRC+D W+DFS+CMS C  P++C  LREDY ECLHH KE
Sbjct: 1   MASGWGINGNKGRCYDFWLDFSECMSRCRQPTDCGLLREDYLECLHHSKE 50


>tr|A2YY10|A2YY10_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_30228 PE=4 SV=1
          Length = 90

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 35/50 (70%), Positives = 41/50 (82%)
 Frame = +1

Query: 34  MASGWGIHGVKGRCFDLWMDFSDCMSNCTTPSECFPLREDYFECLHHRKE 183
           MASGWGI+G KGRC+D W+DFS+CMS C  P++C  LREDY ECLHH KE
Sbjct: 1   MASGWGINGNKGRCYDFWLDFSECMSRCRQPTDCGLLREDYLECLHHSKE 50