DK943623 |
Clone id |
YMU02A01NGRL0003_G20 |
Library |
YMU02 |
Length |
548 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_G20. 5' end sequence. |
Accession |
DK943623 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL234Contig1 |
Sequence |
GGCGTGCCTTCTGCTTGGTCTTCCTCTGGTCTTCTTTCTCTGCAGAGCCAATCCTTGGAG ACCACCTTGAGGCAGCCCTCGATCGGCAGTAACAGGACCTCTCTCCGCATCCATTGCGCC ACGCAAGCCGCTGGTCTCCAGCCCGGCGGTACTCGTATAATTGGCGGCAAACGTGTCAAA GTCTTACAAATTGGGGACAAATCTGGTAAAATGCGTGATAAAATCATTGGTGAGCCTGCT GCAGTAAAGCTGTTGTCAAGGGTCCAACAACTAAGACTGCTGAGCAAAGCAGAGAAGGCG GGTCTCTTGTCAGCAGCCGAGAAAGCAGGATTATCCTTGTCTACCATAGAAAGGCTTGGC CTTCTTTCTAAGGCTGAAGGTCTTGGAGTCTTATCTGCAGCAACGAACCCAAGTACCCCT GGGACTTTGTTGACGCTTGCCTTGGTTTTGCTCGCAGGGGGTCCGGCTTTTGTTTACTTT GTCCCAGAAGATGCAATCTGGCAGATAGTTGTGCAGTTTGCAGTTGCTTTCATTTCTGTC CTGGGGGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q08BW0 |
Definition |
sp|Q08BW0|OTUD5_DANRE OTU domain-containing protein 5 OS=Danio rerio |
Align length |
87 |
Score (bit) |
35.4 |
E-value |
0.17 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NMI1 |
Definition |
tr|A9NMI1|A9NMI1_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
126 |
Score (bit) |
92.8 |
E-value |
1.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943623|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0003_G20, 5' (530 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NMI1|A9NMI1_PICSI Putative uncharacterized protein OS=Picea... 93 1e-17 tr|Q9SD79|Q9SD79_ARATH Putative uncharacterized protein F13G24.2... 85 2e-15 tr|Q8VYV1|Q8VYV1_ARATH AT5g08050/F13G24_250 OS=Arabidopsis thali... 85 2e-15 tr|A9PGF4|A9PGF4_POPTR Putative uncharacterized protein OS=Popul... 82 2e-14 tr|A7QI04|A7QI04_VITVI Chromosome chr17 scaffold_101, whole geno... 82 2e-14 tr|Q2QN86|Q2QN86_ORYSJ Os12g0575000 protein OS=Oryza sativa subs... 80 8e-14 tr|B8BMN2|B8BMN2_ORYSI Putative uncharacterized protein OS=Oryza... 80 8e-14 tr|A3CIP9|A3CIP9_ORYSJ Putative uncharacterized protein OS=Oryza... 80 8e-14 tr|B4FV96|B4FV96_MAIZE Putative uncharacterized protein OS=Zea m... 77 5e-13 tr|A9S2G0|A9S2G0_PHYPA Predicted protein (Fragment) OS=Physcomit... 73 8e-12 tr|A2ZE10|A2ZE10_ORYSI Putative uncharacterized protein OS=Oryza... 61 4e-08 tr|B4FRC0|B4FRC0_MAIZE Putative uncharacterized protein OS=Zea m... 56 1e-06 tr|B6TFL9|B6TFL9_MAIZE Putative uncharacterized protein OS=Zea m... 55 3e-06 tr|Q2R4U2|Q2R4U2_ORYSJ Putative uncharacterized protein OS=Oryza... 54 6e-06 tr|A9TJ04|A9TJ04_PHYPA Predicted protein OS=Physcomitrella paten... 54 6e-06 tr|B7FFF0|B7FFF0_MEDTR Putative uncharacterized protein OS=Medic... 53 8e-06 tr|A9NZ32|A9NZ32_PICSI Putative uncharacterized protein OS=Picea... 53 8e-06 tr|A9TMU4|A9TMU4_PHYPA Predicted protein OS=Physcomitrella paten... 53 1e-05 tr|A9S8Z7|A9S8Z7_PHYPA Predicted protein (Fragment) OS=Physcomit... 52 2e-05 tr|Q2QN87|Q2QN87_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 51 3e-05 tr|Q0JLN9|Q0JLN9_ORYSJ cDNA clone:J023103B06, full insert sequen... 50 7e-05 tr|A2WRV9|A2WRV9_ORYSI Putative uncharacterized protein OS=Oryza... 50 7e-05 tr|A9PJV1|A9PJV1_POPJC Putative uncharacterized protein OS=Popul... 49 2e-04 tr|A5C347|A5C347_VITVI Putative uncharacterized protein (Chromos... 48 4e-04 tr|B7FKD0|B7FKD0_MEDTR Putative uncharacterized protein OS=Medic... 47 6e-04 tr|Q9SSF7|Q9SSF7_ARATH F25A4.30 protein OS=Arabidopsis thaliana ... 45 0.002 tr|Q94F10|Q94F10_ARATH Putative uncharacterized protein (Putativ... 45 0.002 tr|Q4TH71|Q4TH71_TETNG Chromosome undetermined SCAF3173, whole g... 35 1.8 tr|A0JMQ4|A0JMQ4_DANRE Retinoblastoma 1 OS=Danio rerio GN=rb1 PE... 35 1.8 tr|B8PAE3|B8PAE3_9APHY Predicted protein OS=Postia placenta Mad-... 35 1.8
>tr|A9NMI1|A9NMI1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 183
Score = 92.8 bits (229), Expect = 1e-17 Identities = 55/126 (43%), Positives = 72/126 (57%), Gaps = 1/126 (0%) Frame = +1
Query: 154 RIIGGKR-VKVLQIGDKSGKMRDKIIGEPAAXXXXXXXXXXXXXXXAEKAGLLSAAEKAG 330 + +GG R VKV +GDKS +R K ++ AEKAGLLSAAEK+G Sbjct: 34 KAVGGTRQVKVFPLGDKSAVLRPKNEFNGSSIKLLSRVEQLKLLSKAEKAGLLSAAEKSG 93
Query: 331 LSLSTIERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXXFVYFVPEDAIWQIV 510 LSLS IE LGLLSKAE LG+LS+AT+P+ VYFVP+D+ W++ Sbjct: 94 LSLSKIESLGLLSKAEELGILSSATDPNTPGALLNLAIALLIAGPLCVYFVPDDSSWEVA 153
Query: 511 VQFAVA 528 +Q +A Sbjct: 154 LQVVIA 159
>tr|Q9SD79|Q9SD79_ARATH Putative uncharacterized protein F13G24.250 OS=Arabidopsis thaliana GN=F13G24.250 PE=4 SV=1 Length = 158
Score = 85.1 bits (209), Expect = 2e-15 Identities = 46/80 (57%), Positives = 51/80 (63%) Frame = +1
Query: 289 AEKAGLLSAAEKAGLSLSTIERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXX 468 AEKAGLLS AEK+G SLSTIERLGLL+KAE GVLSAATNP Sbjct: 55 AEKAGLLSLAEKSGFSLSTIERLGLLTKAEEFGVLSAATNPETPGTLFTLSLGLLLLGPV 114
Query: 469 FVYFVPEDAIWQIVVQFAVA 528 F Y VPED W++V+Q VA Sbjct: 115 FAYVVPEDYTWEVVIQVLVA 134
>tr|Q8VYV1|Q8VYV1_ARATH AT5g08050/F13G24_250 OS=Arabidopsis thaliana PE=2 SV=1 Length = 158
Score = 85.1 bits (209), Expect = 2e-15 Identities = 46/80 (57%), Positives = 51/80 (63%) Frame = +1
Query: 289 AEKAGLLSAAEKAGLSLSTIERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXX 468 AEKAGLLS AEK+G SLSTIERLGLL+KAE GVLSAATNP Sbjct: 55 AEKAGLLSLAEKSGFSLSTIERLGLLTKAEEFGVLSAATNPETPGTLFTLSLGLLLLGPV 114
Query: 469 FVYFVPEDAIWQIVVQFAVA 528 F Y VPED W++V+Q VA Sbjct: 115 FAYVVPEDYTWEVVIQVLVA 134
>tr|A9PGF4|A9PGF4_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 194
Score = 81.6 bits (200), Expect = 2e-14 Identities = 46/79 (58%), Positives = 51/79 (64%) Frame = +1
Query: 289 AEKAGLLSAAEKAGLSLSTIERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXX 468 AEKAGLLSAAEK GLSLSTIE+LGLLSKAE LGVLSAAT+P Sbjct: 91 AEKAGLLSAAEKFGLSLSTIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLFLGPS 150
Query: 469 FVYFVPEDAIWQIVVQFAV 525 Y VPED W++ +Q AV Sbjct: 151 CAYLVPEDYPWEVALQVAV 169
>tr|A7QI04|A7QI04_VITVI Chromosome chr17 scaffold_101, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000042001 PE=4 SV=1 Length = 206
Score = 81.6 bits (200), Expect = 2e-14 Identities = 56/143 (39%), Positives = 67/143 (46%), Gaps = 1/143 (0%) Frame = +1
Query: 103 LRIHC-ATQAAGLQPGGTRIIGGKRVKVLQIGDKSGKMRDKIIGEPAAXXXXXXXXXXXX 279 L IH ATQ L P I K V +G+K R + P Sbjct: 42 LLIHSMATQKPTLPPASKTISSRKASTVFPLGEKGP--RSSPLATPPPIKLLTRVEQLKL 99
Query: 280 XXXAEKAGLLSAAEKAGLSLSTIERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXX 459 AEKAGLLSAAEK G SLS+IE+LGLLSKAE G+LSAAT+P Sbjct: 100 LTKAEKAGLLSAAEKYGFSLSSIEKLGLLSKAEEFGILSAATDPGTPGALLSLSLVLLLL 159
Query: 460 XXXFVYFVPEDAIWQIVVQFAVA 528 + VPED W++ +Q VA Sbjct: 160 GPSCAFLVPEDYPWEVALQLVVA 182
>tr|Q2QN86|Q2QN86_ORYSJ Os12g0575000 protein OS=Oryza sativa subsp. japonica GN=Os12g0575000 PE=2 SV=1 Length = 190
Score = 79.7 bits (195), Expect = 8e-14 Identities = 45/80 (56%), Positives = 51/80 (63%) Frame = +1
Query: 289 AEKAGLLSAAEKAGLSLSTIERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXX 468 AEKAGLLSAAE+AGLSLS +ERLGLLSKAE L VLSAAT+P Sbjct: 86 AEKAGLLSAAERAGLSLSAVERLGLLSKAEELEVLSAATDPGTPGALLGVALLLLAAGPA 145
Query: 469 FVYFVPEDAIWQIVVQFAVA 528 VY VPE+ W++ VQ VA Sbjct: 146 VVYLVPEEYPWEVAVQAVVA 165
>tr|B8BMN2|B8BMN2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_38846 PE=4 SV=1 Length = 190
Score = 79.7 bits (195), Expect = 8e-14 Identities = 45/80 (56%), Positives = 51/80 (63%) Frame = +1
Query: 289 AEKAGLLSAAEKAGLSLSTIERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXX 468 AEKAGLLSAAE+AGLSLS +ERLGLLSKAE L VLSAAT+P Sbjct: 86 AEKAGLLSAAERAGLSLSAVERLGLLSKAEELEVLSAATDPGTPGALLGVALLLLAAGPA 145
Query: 469 FVYFVPEDAIWQIVVQFAVA 528 VY VPE+ W++ VQ VA Sbjct: 146 VVYLVPEEYPWEVAVQAVVA 165
>tr|A3CIP9|A3CIP9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_035171 PE=4 SV=1 Length = 197
Score = 79.7 bits (195), Expect = 8e-14 Identities = 45/80 (56%), Positives = 51/80 (63%) Frame = +1
Query: 289 AEKAGLLSAAEKAGLSLSTIERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXX 468 AEKAGLLSAAE+AGLSLS +ERLGLLSKAE L VLSAAT+P Sbjct: 93 AEKAGLLSAAERAGLSLSAVERLGLLSKAEELEVLSAATDPGTPGALLGVALLLLAAGPA 152
Query: 469 FVYFVPEDAIWQIVVQFAVA 528 VY VPE+ W++ VQ VA Sbjct: 153 VVYLVPEEYPWEVAVQAVVA 172
>tr|B4FV96|B4FV96_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 193
Score = 77.0 bits (188), Expect = 5e-13 Identities = 42/80 (52%), Positives = 49/80 (61%) Frame = +1
Query: 289 AEKAGLLSAAEKAGLSLSTIERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXX 468 AE+AGLLSAAE+AGLSLS +ERLGLLSK E LG LSAAT+P Sbjct: 89 AERAGLLSAAERAGLSLSAMERLGLLSKLEELGALSAATDPGTPGALLALALPLLAAGPA 148
Query: 469 FVYFVPEDAIWQIVVQFAVA 528 VY VPE+ WQ+ +Q A Sbjct: 149 VVYLVPEEQAWQVALQAVAA 168
>tr|A9S2G0|A9S2G0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_123160 PE=4 SV=1 Length = 119
Score = 73.2 bits (178), Expect = 8e-12 Identities = 43/80 (53%), Positives = 48/80 (60%) Frame = +1
Query: 289 AEKAGLLSAAEKAGLSLSTIERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXX 468 AEKAGLL+ E G SLS IE LGLLSKAE LGVLSAATNP+ Sbjct: 16 AEKAGLLTTVENLGFSLSKIESLGLLSKAEELGVLSAATNPATPGALLTTALALLLLGPV 75
Query: 469 FVYFVPEDAIWQIVVQFAVA 528 FVYFVPE + IV+Q +A Sbjct: 76 FVYFVPETSTPLIVLQVIIA 95
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