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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK943630
Clone id YMU02A01NGRL0003_H05
Library
Length 559
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_H05. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
ATTCGTGGACGGGGTATATACATCCCACTGGAGCTCATCGCTTCTCCAGAGCTCCAGATT
AGCAGAGCAAAGGGAGAGTGATTGTACGCAGTATTCAGTATGGCCATCTCCATAGCCGCT
TCCTCGGCAGTTGTCGCTCCTAGCTGCGCCCCCGCAGAGAGCTTGTCAAAGAGCTTCTCT
GGTCTCAAGGCCACTACCCTGTTCGCCCCCAAGAGCCCCAACCCGCTCGCCATCTCTAAT
GGCAGCCGTGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACT
CTGTCCTACTTGCCGCCTTTGTCAAGTGAGCAGATTGCGAAGCAGGTGGACTTCATGGTC
CGAAAAGGCTGGACCCCTTGCATTGAGTTCGACAAAATCGGGAGCGTGTACCGAGAGCAC
TTCCACGGCAGCGGCTACTACGATGGGCGGTACTGGGTGATGTGGAAGCTGCCCATGTTT
GGCTGCCAAGATGCCGCTGCTGTGCGGCGTGGAATTGCAGAGTGCGCCAAGGAGTATCCT
GAAGCCTTCATCCGCGTGC
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 137
Score (bit) 161.0
E-value 2.0e-39
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943630|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_H05, 5'
         (559 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   161   2e-39
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   157   3e-38
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   156   6e-38
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   156   7e-38
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   155   1e-37
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   155   2e-37
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   155   2e-37
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   155   2e-37
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   155   2e-37
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   154   2e-37
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   154   2e-37
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   154   2e-37
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   154   4e-37
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   154   4e-37
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   153   5e-37
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   153   6e-37
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   152   8e-37
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   152   1e-36
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   152   1e-36
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   152   1e-36
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   152   1e-36
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   152   1e-36
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   151   2e-36
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   151   2e-36
sp|Q39743|RBS1_FLAPR Ribulose bisphosphate carboxylase small cha...   151   2e-36
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha...   151   2e-36
sp|P07089|RBS_FLATR Ribulose bisphosphate carboxylase small chai...   150   3e-36
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   150   3e-36
sp|Q39744|RBS2_FLAPR Ribulose bisphosphate carboxylase small cha...   150   3e-36
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   150   3e-36

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  161 bits (408), Expect = 2e-39
 Identities = 76/137 (55%), Positives = 95/137 (69%), Gaps = 5/137 (3%)
 Frame = +1

Query: 163 LSKSFSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 330
           L+  F+GLK+   F    K+ N  +   SNG RV  M VW P   KK+ETLSYLPPLS E
Sbjct: 22  LAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDE 81

Query: 331 QIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVR 507
            ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D+A V 
Sbjct: 82  ALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVM 141

Query: 508 RGIAECAKEYPEAFIRV 558
           + + EC KEYP AFIRV
Sbjct: 142 KEVGECKKEYPNAFIRV 158


>sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1
          Length = 170

 Score =  157 bits (397), Expect = 3e-38
 Identities = 74/131 (56%), Positives = 90/131 (68%), Gaps = 3/131 (2%)
 Frame = +1

Query: 175 FSGLKATTLF--APKSPNPLA-ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 345
           F GLK+T     A +S   L  +SNG R+  M VW  Y NKKFETLSYLPPLS++ + KQ
Sbjct: 17  FQGLKSTASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQ 76

Query: 346 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVRRGIAEC 525
           VD+++R GW PC+EF K+G VYRE+     YYDGRYW MWKLPMFGC DA  V + + E 
Sbjct: 77  VDYLLRNGWIPCLEFSKVGFVYRENSTSPCYYDGRYWTMWKLPMFGCNDATQVYKELQEA 136

Query: 526 AKEYPEAFIRV 558
            K YP+AF RV
Sbjct: 137 IKSYPDAFHRV 147


>sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1
          Length = 178

 Score =  156 bits (395), Expect = 6e-38
 Identities = 74/132 (56%), Positives = 94/132 (71%), Gaps = 4/132 (3%)
 Frame = +1

Query: 175 FSGLKATTLF-APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 345
           F+GLK+   F   K  N  +   SNG RV  M VW P   KK+ETLSYLPPL+  Q+AK+
Sbjct: 25  FTGLKSNAAFPTTKKANDFSTLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQLAKE 84

Query: 346 VDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVRRGIAE 522
           VD+++RK W PC+EF+ + G VYRE+    GYYDGRYW MWKLPMFGC D+A V + +AE
Sbjct: 85  VDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELAE 144

Query: 523 CAKEYPEAFIRV 558
           C KEYP+A+IR+
Sbjct: 145 CKKEYPQAWIRI 156


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  156 bits (394), Expect = 7e-38
 Identities = 71/129 (55%), Positives = 89/129 (68%)
 Frame = +1

Query: 172 SFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVD 351
           S +    T  FA  S  P   SNG RV  M VW P   KKFETLSYLPPL+ EQ+ ++VD
Sbjct: 31  SSAAFPVTRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVD 87

Query: 352 FMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVRRGIAECAK 531
           +++R GW PCIEF K+G VYRE+ +  GYYDGRYW MWKLPMFGC D++ V + + EC+K
Sbjct: 88  YLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSK 147

Query: 532 EYPEAFIRV 558
            YP+ F R+
Sbjct: 148 AYPDYFNRI 156


>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1
          Length = 178

 Score =  155 bits (393), Expect = 1e-37
 Identities = 74/136 (54%), Positives = 98/136 (72%), Gaps = 4/136 (2%)
 Frame = +1

Query: 163 LSKSFSGLKATTLF-APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQ 333
           L+  F+GLK++  F   K  N +    SNGSRV+ M VW P   KKFETLSYLPPL+ EQ
Sbjct: 21  LATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDEQ 80

Query: 334 IAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVRR 510
           + K+V++++RKGW PC+EF+ + G V+R++    GYYDGRYW MW+LP+FG  DAA V +
Sbjct: 81  LLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVLK 140

Query: 511 GIAECAKEYPEAFIRV 558
            +AEC  EYPEAFIR+
Sbjct: 141 EVAECKAEYPEAFIRI 156


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  155 bits (391), Expect = 2e-37
 Identities = 76/133 (57%), Positives = 94/133 (70%), Gaps = 5/133 (3%)
 Frame = +1

Query: 175 FSGLKATTLF--APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 342
           F+ LK+T+ F    K+ N +    SNG RV  M VW P   KKFETLSYLPPLSSEQ+AK
Sbjct: 28  FTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAK 87

Query: 343 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVRRGIA 519
           +VD+++RK   PC+EF+ + G VYREH    GYYDGRYW MWKLPMFGC D++ V + + 
Sbjct: 88  EVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELE 147

Query: 520 ECAKEYPEAFIRV 558
           EC K YP AFIR+
Sbjct: 148 ECKKAYPSAFIRI 160


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  155 bits (391), Expect = 2e-37
 Identities = 75/132 (56%), Positives = 91/132 (68%), Gaps = 4/132 (3%)
 Frame = +1

Query: 175 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 342
           F+GL+++  F    K+ N L+   SNG RVS M VW P   KKFETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 343 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVRRGIAE 522
           +VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V   + E
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 523 CAKEYPEAFIRV 558
             K YPE F+R+
Sbjct: 146 AKKAYPEYFVRI 157


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  155 bits (391), Expect = 2e-37
 Identities = 75/132 (56%), Positives = 91/132 (68%), Gaps = 4/132 (3%)
 Frame = +1

Query: 175 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 342
           F+GL+++  F    K+ N L+   SNG RVS M VW P   KKFETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 343 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVRRGIAE 522
           +VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V   + E
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 523 CAKEYPEAFIRV 558
             K YPE F+R+
Sbjct: 146 AKKAYPEYFVRI 157


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
           1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
           PE=1 SV=2
          Length = 180

 Score =  155 bits (391), Expect = 2e-37
 Identities = 72/133 (54%), Positives = 94/133 (70%), Gaps = 5/133 (3%)
 Frame = +1

Query: 175 FSGLKATTLFAP--KSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 342
           F+GLK++  F    K+ N +    SNG RV+ M VW P   KKFETLSYLP L+  ++AK
Sbjct: 24  FNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAK 83

Query: 343 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVRRGIA 519
           +VD+++R  W PC+EF+ + G VYREH +  GYYDGRYW MWKLP+FGC D+A V + + 
Sbjct: 84  EVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVE 143

Query: 520 ECAKEYPEAFIRV 558
           EC KEYP AFIR+
Sbjct: 144 ECKKEYPNAFIRI 156


>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1
          Length = 183

 Score =  154 bits (390), Expect = 2e-37
 Identities = 74/132 (56%), Positives = 96/132 (72%), Gaps = 4/132 (3%)
 Frame = +1

Query: 175 FSGLKATTLF--APKSPNPLAI-SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 345
           F+GLK+++ F    KS +  +I SNG RV  M VW P   KKFETLSYLPPLSSE +AK+
Sbjct: 30  FNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKE 89

Query: 346 VDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVRRGIAE 522
           VD+++RK W PC+EF+ + G VYRE+    GYYDGRYW MWKLPMFGC D++ V + + E
Sbjct: 90  VDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEE 149

Query: 523 CAKEYPEAFIRV 558
             K YP++FIR+
Sbjct: 150 AKKAYPQSFIRI 161
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 132
Score (bit) 248.0
E-value 1.0e-64
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943630|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_H05, 5'
         (559 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   248   1e-64
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   170   6e-41
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   167   5e-40
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   166   8e-40
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   166   1e-39
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   166   1e-39
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   163   7e-39
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   162   2e-38
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   160   3e-38
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   160   4e-38
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   160   4e-38
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   160   4e-38
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   158   2e-37
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   158   2e-37
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...   157   3e-37
tr|B4FSJ3|B4FSJ3_MAIZE Putative uncharacterized protein OS=Zea m...   157   4e-37
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...   157   4e-37
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...   156   6e-37
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c...   156   6e-37
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   156   6e-37
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   155   1e-36
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c...   155   1e-36
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c...   155   1e-36
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   155   1e-36
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   155   1e-36
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   155   2e-36
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c...   155   2e-36
tr|Q6RWD8|Q6RWD8_CAPAN Ribulose bisphosphate carboxylase small c...   154   2e-36
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c...   154   2e-36
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...   154   2e-36

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  248 bits (634), Expect = 1e-64
 Identities = 114/132 (86%), Positives = 123/132 (93%)
 Frame = +1

Query: 163 LSKSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 342
           LSKSFSGLKA TLFAPK  NPLAISNGSR+SAMLVWKPYDNKKFETLSYLPPL+++QIAK
Sbjct: 22  LSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAK 81

Query: 343 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVRRGIAE 522
           QV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +V R IAE
Sbjct: 82  QVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAE 141

Query: 523 CAKEYPEAFIRV 558
           CAKEYP AFIRV
Sbjct: 142 CAKEYPTAFIRV 153


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  170 bits (430), Expect = 6e-41
 Identities = 80/133 (60%), Positives = 96/133 (72%), Gaps = 3/133 (2%)
 Frame = +1

Query: 169 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 348
           K FSGLK+TTLFA K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 349 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVRRGIA 519
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A V R I 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 520 ECAKEYPEAFIRV 558
           EC + +P  ++RV
Sbjct: 147 ECKQSFPSCWVRV 159


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  167 bits (422), Expect = 5e-40
 Identities = 79/133 (59%), Positives = 95/133 (71%), Gaps = 3/133 (2%)
 Frame = +1

Query: 169 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 348
           K FSGLK+TTL A K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 349 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVRRGIA 519
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A V R I 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 520 ECAKEYPEAFIRV 558
           EC + +P  ++RV
Sbjct: 147 ECKQSFPSCWVRV 159


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  166 bits (420), Expect = 8e-40
 Identities = 77/133 (57%), Positives = 94/133 (70%), Gaps = 3/133 (2%)
 Frame = +1

Query: 169 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 348
           K+FSGLK+ TLF  KS    ++ NGSRV  M VW P    KFET SYLPPLS +QIA+QV
Sbjct: 32  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 349 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVRRGIA 519
           D+M+++   PCIEFD +G+V R +F G   SGYYDGRYW MWKLPMFGC D++ V R I 
Sbjct: 92  DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 520 ECAKEYPEAFIRV 558
           EC   YP  ++RV
Sbjct: 152 ECKTSYPSCWVRV 164


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  166 bits (419), Expect = 1e-39
 Identities = 76/133 (57%), Positives = 96/133 (72%), Gaps = 3/133 (2%)
 Frame = +1

Query: 169 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 348
           K+FSGLK+ TLF+ K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 62  KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 349 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVRRGIA 519
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ V R I 
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 181

Query: 520 ECAKEYPEAFIRV 558
           EC  ++P  ++RV
Sbjct: 182 ECKSQFPSCWVRV 194


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  166 bits (419), Expect = 1e-39
 Identities = 77/133 (57%), Positives = 95/133 (71%), Gaps = 3/133 (2%)
 Frame = +1

Query: 169 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 348
           K+FSGLK  TLF+ K+    A+ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 32  KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 349 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVRRGIA 519
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ V R I 
Sbjct: 92  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 520 ECAKEYPEAFIRV 558
           EC  ++P  ++RV
Sbjct: 152 ECKSQFPSCWVRV 164


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  163 bits (412), Expect = 7e-39
 Identities = 74/133 (55%), Positives = 96/133 (72%), Gaps = 3/133 (2%)
 Frame = +1

Query: 169 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 348
           K+FSGLK+ TLF+ ++    ++ NGSRV  M VW P    KFET SYLPPL+ ++IAKQV
Sbjct: 31  KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 349 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVRRGIA 519
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ V R I 
Sbjct: 91  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150

Query: 520 ECAKEYPEAFIRV 558
           EC  ++P  ++RV
Sbjct: 151 ECKTQFPSCWVRV 163


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  162 bits (409), Expect = 2e-38
 Identities = 76/137 (55%), Positives = 95/137 (69%), Gaps = 5/137 (3%)
 Frame = +1

Query: 163 LSKSFSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 330
           L+  F+GLK+   F    K+ N  +   SNG RV  M VW P   KK+ETLSYLPPLS E
Sbjct: 22  LAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDE 81

Query: 331 QIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVR 507
            ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D+A V 
Sbjct: 82  ALSKEIDYLIRNKWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVM 141

Query: 508 RGIAECAKEYPEAFIRV 558
           + + EC KEYP AFIRV
Sbjct: 142 KEVGECKKEYPNAFIRV 158


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_115069 PE=3 SV=1
          Length = 181

 Score =  160 bits (406), Expect = 3e-38
 Identities = 73/130 (56%), Positives = 91/130 (70%)
 Frame = +1

Query: 169 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 348
           K+FSGLK+ T+F+ K+ N  ++ NGSRV  M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 349 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVRRGIAECA 528
           ++M+++   PC+EFD    V R +    GYYDGRYW MWKLPMFGCQD+A V R I EC 
Sbjct: 92  EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151

Query: 529 KEYPEAFIRV 558
           K +P  F+RV
Sbjct: 152 KTFPGCFVRV 161


>tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small
           chain OS=Panax ginseng PE=2 SV=1
          Length = 183

 Score =  160 bits (405), Expect = 4e-38
 Identities = 74/132 (56%), Positives = 94/132 (71%), Gaps = 4/132 (3%)
 Frame = +1

Query: 175 FSGLKATTLF-APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 345
           F+GLK+T  F   +  N +    SNG RV  M VW P   KKFETLSYLP L+ EQ++K+
Sbjct: 28  FTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMKVWPPLGLKKFETLSYLPQLTQEQLSKE 87

Query: 346 VDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVRRGIAE 522
           VD+++R GW PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D++ V + + E
Sbjct: 88  VDYLLRSGWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVEE 147

Query: 523 CAKEYPEAFIRV 558
           C KEYP A+IR+
Sbjct: 148 CKKEYPNAYIRI 159