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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK943636
Clone id YMU02A01NGRL0003_H12
Library
Length 321
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_H12. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
AAGGAACTGGAGAGTGTGTGTAACCCCATTATTGCAAGGATGTATCAGGGGGGTGCTGGT
CCTGATATGCCCCCTGGTGCATATAGCGACGAGGCTGGGCCTGGTGCTTCTTCTGGAGCA
GGGCCCAAGATTGAAGAGGTTGATTAAGTAAATCTTTAAAATTGGCTTTGGGGCTGATCT
TTTTGCAGTGAACACCAATATTGGTGATGGATGAAGTCCCTGAGAGCCACATCTGACAGC
TTTTTGGTTTTGTTTATATCGATTTTAGTTGGGAAATAATTCAACTTTTTTCCAAAAGAA
AAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P22954
Definition sp|P22954|HSP72_ARATH Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana
Align length 51
Score (bit) 47.8
E-value 2.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943636|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_H12, 5'
         (293 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P22954|HSP72_ARATH Heat shock cognate 70 kDa protein 2 OS=Ara...    48   2e-05
sp|P22953|HSP71_ARATH Heat shock cognate 70 kDa protein 1 OS=Ara...    48   2e-05
sp|P26413|HSP70_SOYBN Heat shock 70 kDa protein OS=Glycine max G...    47   3e-05
sp|O65719|HSP73_ARATH Heat shock cognate 70 kDa protein 3 OS=Ara...    45   8e-05
sp|P25840|HSP70_CHLRE Heat shock 70 kDa protein OS=Chlamydomonas...    45   1e-04
sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein OS=Petun...    45   1e-04
sp|P27322|HSP72_SOLLC Heat shock cognate 70 kDa protein 2 OS=Sol...    44   2e-04
sp|P26791|HSP70_DAUCA Heat shock 70 kDa protein OS=Daucus carota...    43   5e-04
sp|P24629|HSP71_SOLLC Heat shock cognate 70 kDa protein 1 OS=Sol...    42   7e-04
sp|P11143|HSP70_MAIZE Heat shock 70 kDa protein OS=Zea mays GN=H...    42   0.001
sp|P17804|HSP70_LEIDO Heat shock 70 kDa protein OS=Leishmania do...    42   0.001
sp|P29357|HSP7E_SPIOL Chloroplast envelope membrane 70 kDa heat ...    41   0.002
sp|Q28222|HSP71_CERAE Heat shock 70 kDa protein 1 OS=Cercopithec...    41   0.002
sp|Q27965|HS71B_BOVIN Heat shock 70 kDa protein 1B OS=Bos taurus...    40   0.004
sp|Q4U0F3|HS71B_BOSMU Heat shock 70 kDa protein 1B OS=Bos mutus ...    40   0.004
sp|Q27975|HS71A_BOVIN Heat shock 70 kDa protein 1A OS=Bos taurus...    40   0.004
sp|P39674|MAG29_DERFA Allergen MAG29 (Fragment) OS=Dermatophagoi...    40   0.005
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein OS=Ictal...    39   0.006
sp|Q90473|HSP7C_DANRE Heat shock cognate 71 kDa protein OS=Danio...    39   0.010
sp|O59855|HSP72_SCHPO Probable heat shock protein ssa2 OS=Schizo...    39   0.010
sp|Q5R7D3|HSP71_PONAB Heat shock 70 kDa protein 1 OS=Pongo abeli...    39   0.010
sp|P08107|HSP71_HUMAN Heat shock 70 kDa protein 1 OS=Homo sapien...    39   0.010
sp|Q24789|HSP70_ECHGR Heat shock cognate 70 kDa protein OS=Echin...    39   0.010
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein OS=Brugia malayi...    39   0.010
sp|P34933|HSP72_BOVIN Heat shock-related 70 kDa protein 2 OS=Bos...    38   0.014
sp|Q9I8F9|HSP71_ORYLA Heat shock 70 kDa protein 1 OS=Oryzias lat...    38   0.014
sp|Q91291|HSP70_PLEWA Heat shock 70 kDa protein OS=Pleurodeles w...    38   0.014
sp|P34930|HS71A_PIG Heat shock 70 kDa protein 1A OS=Sus scrofa G...    38   0.014
sp|P14659|HSP72_RAT Heat shock-related 70 kDa protein 2 OS=Rattu...    38   0.018
sp|P17156|HSP72_MOUSE Heat shock-related 70 kDa protein 2 OS=Mus...    38   0.018

>sp|P22954|HSP72_ARATH Heat shock cognate 70 kDa protein 2
           OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2
          Length = 653

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 28/51 (54%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
 Frame = +1

Query: 1   KELESVCNPIIARMYQGGAGPDM-PPGA--YSDEXXXXXXXXXXXKIEEVD 144
           KELESVCNPIIA+MYQGGAG +   PGA    ++           KIEEVD
Sbjct: 603 KELESVCNPIIAKMYQGGAGGEAGGPGASGMDEDEAPPASGGAGPKIEEVD 653


>sp|P22953|HSP71_ARATH Heat shock cognate 70 kDa protein 1
           OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3
          Length = 651

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 26/49 (53%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +1

Query: 1   KELESVCNPIIARMYQGGAGPDMPPGAYS-DEXXXXXXXXXXXKIEEVD 144
           KELES+CNPIIA+MYQG  G    PGA   D+           KIEEVD
Sbjct: 603 KELESICNPIIAKMYQGAGGEAGGPGASGMDDDAPPASGGAGPKIEEVD 651


>sp|P26413|HSP70_SOYBN Heat shock 70 kDa protein OS=Glycine max
           GN=HSP70 PE=3 SV=1
          Length = 645

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 27/50 (54%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1   KELESVCNPIIARMYQGGAGP--DMPPGAYSDEXXXXXXXXXXXKIEEVD 144
           KELE +CNPIIA+MYQG AGP  D+P GA               KIEEVD
Sbjct: 602 KELEGICNPIIAKMYQGAAGPGGDVPMGA------DMPAAGAGPKIEEVD 645


>sp|O65719|HSP73_ARATH Heat shock cognate 70 kDa protein 3
           OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1
          Length = 649

 Score = 45.4 bits (106), Expect = 8e-05
 Identities = 25/48 (52%), Positives = 27/48 (56%)
 Frame = +1

Query: 1   KELESVCNPIIARMYQGGAGPDMPPGAYSDEXXXXXXXXXXXKIEEVD 144
           KELES+CNPIIA+MYQGG     P     DE           KIEEVD
Sbjct: 603 KELESICNPIIAKMYQGGEAGG-PAAGGMDEDVPPSAGGAGPKIEEVD 649


>sp|P25840|HSP70_CHLRE Heat shock 70 kDa protein OS=Chlamydomonas
           reinhardtii GN=HSP70 PE=2 SV=2
          Length = 650

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +1

Query: 1   KELESVCNPIIARMYQGGAGP-DMPPGAYSDEXXXXXXXXXXXKIEEVD 144
           KELE +CNPII R+YQGGAG   MP G                KIEEVD
Sbjct: 602 KELEGLCNPIITRLYQGGAGAGGMPGGGAGAGAAPSGGSGAGPKIEEVD 650


>sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein OS=Petunia
           hybrida GN=HSP70 PE=2 SV=1
          Length = 651

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 28/54 (51%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
 Frame = +1

Query: 1   KELESVCNPIIARMYQGGAGPDMPPGAYSDE------XXXXXXXXXXXKIEEVD 144
           KELES+CNPIIA+MYQGGAG     GA  DE                 KIEEVD
Sbjct: 603 KELESICNPIIAKMYQGGAG-----GATMDEDGPSVGGSAGSQTGAGPKIEEVD 651


>sp|P27322|HSP72_SOLLC Heat shock cognate 70 kDa protein 2
           OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1
          Length = 644

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 27/48 (56%), Positives = 29/48 (60%)
 Frame = +1

Query: 1   KELESVCNPIIARMYQGGAGPDMPPGAYSDEXXXXXXXXXXXKIEEVD 144
           KELES+CNPIIA+MYQ GAG DM      DE           KIEEVD
Sbjct: 603 KELESLCNPIIAKMYQ-GAGGDM-----DDEGPAPSGGGAGPKIEEVD 644


>sp|P26791|HSP70_DAUCA Heat shock 70 kDa protein OS=Daucus carota
           GN=HSP70 PE=3 SV=1
          Length = 655

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 26/54 (48%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
 Frame = +1

Query: 1   KELESVCNPIIARMYQG------GAGPDMPPGAYSDEXXXXXXXXXXXKIEEVD 144
           KELE +CNPIIAR+YQG      G   DMP G Y              KIEEVD
Sbjct: 605 KELEGLCNPIIARLYQGRGDVPIGGPGDMPGGGYGGS---RGSSGAGPKIEEVD 655


>sp|P24629|HSP71_SOLLC Heat shock cognate 70 kDa protein 1
           OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1
          Length = 650

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 23/48 (47%), Positives = 26/48 (54%)
 Frame = +1

Query: 1   KELESVCNPIIARMYQGGAGPDMPPGAYSDEXXXXXXXXXXXKIEEVD 144
           KELE +CNPIIA+MYQG  G    P    D+           KIEEVD
Sbjct: 605 KELEGICNPIIAKMYQGAGGDAGVP--MDDDAPPSGGSSAGPKIEEVD 650


>sp|P11143|HSP70_MAIZE Heat shock 70 kDa protein OS=Zea mays
           GN=HSP70 PE=3 SV=1
          Length = 645

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 24/48 (50%), Positives = 26/48 (54%)
 Frame = +1

Query: 1   KELESVCNPIIARMYQGGAGPDMPPGAYSDEXXXXXXXXXXXKIEEVD 144
           KELE +CNPIIA+MY  G G  M   A  DE           KIEEVD
Sbjct: 599 KELEGICNPIIAKMY-XGEGAGMGAAAGMDEDAPSGGSGAGPKIEEVD 645
tr_hit_id Q41027
Definition tr|Q41027|Q41027_PEA PsHSC71.0 OS=Pisum sativum
Align length 48
Score (bit) 59.3
E-value 9.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943636|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_H12, 5'
         (293 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q41027|Q41027_PEA PsHSC71.0 OS=Pisum sativum PE=2 SV=1              59   9e-08
tr|Q5QHT2|Q5QHT2_9FABA 70 kDa heat shock cognate protein 3 OS=Vi...    57   5e-07
tr|A7PIU7|A7PIU7_VITVI Chromosome chr13 scaffold_17, whole genom...    57   6e-07
tr|Q5QHT3|Q5QHT3_9FABA 70 kDa heat shock cognate protein 2 OS=Vi...    56   8e-07
tr|Q2HT97|Q2HT97_MEDTR Heat shock protein Hsp70 OS=Medicago trun...    54   3e-06
tr|A7PNK8|A7PNK8_VITVI Chromosome chr8 scaffold_23, whole genome...    52   2e-05
tr|Q40151|Q40151_SOLLC Hsc70 OS=Solanum lycopersicum GN=Hsc70 PE...    51   3e-05
tr|B6SZ69|B6SZ69_MAIZE Heat shock cognate 70 kDa protein 2 OS=Ze...    51   3e-05
tr|Q9S9I7|Q9S9I7_MAIZE Heat shock protein 70 homolog OS=Zea mays...    51   3e-05
tr|Q9M4E7|Q9M4E7_CUCSA Heat shock protein 70 OS=Cucumis sativus ...    50   4e-05
tr|B6U1E4|B6U1E4_MAIZE Heat shock cognate 70 kDa protein 2 OS=Ze...    50   4e-05
tr|Q9ZS55|Q9ZS55_ARATH Heat shock protein 70 OS=Arabidopsis thal...    50   6e-05
tr|Q9M6R1|Q9M6R1_MALDO High molecular weight heat shock protein ...    50   6e-05
tr|Q9LHA8|Q9LHA8_ARATH 70 kDa heat shock protein (AT3g12580/T2E2...    50   6e-05
tr|Q943K7|Q943K7_ORYSJ cDNA, clone: J100050G20, full insert sequ...    50   6e-05
tr|B8AC06|B8AC06_ORYSI Putative uncharacterized protein OS=Oryza...    50   6e-05
tr|A9PCA4|A9PCA4_POPTR Putative uncharacterized protein OS=Popul...    50   6e-05
tr|Q9SAU8|Q9SAU8_WHEAT HSP70 OS=Triticum aestivum GN=TaHSP70d PE...    50   7e-05
tr|A5C0Z3|A5C0Z3_VITVI Putative uncharacterized protein (Chromos...    50   7e-05
tr|Q40980|Q40980_PEA PsHSP71.2 (Heat shock protein hsp70) OS=Pis...    49   1e-04
tr|B2D2G5|B2D2G5_CAPSN 70 kDa heat shock protein OS=Capparis spi...    49   1e-04
tr|A9RCV9|A9RCV9_PHYPA Predicted protein OS=Physcomitrella paten...    49   1e-04
tr|Q53NM9|Q53NM9_ORYSJ Heat shock cognate 70 kDa protein, putati...    49   2e-04
tr|Q40693|Q40693_ORYSA Heat shock protein 70 OS=Oryza sativa GN=...    49   2e-04
tr|Q2QZ41|Q2QZ41_ORYSJ Heat shock cognate 70 kDa protein, putati...    49   2e-04
tr|A9U4N3|A9U4N3_PHYPA Predicted protein OS=Physcomitrella paten...    49   2e-04
tr|A9S0A3|A9S0A3_PHYPA Predicted protein OS=Physcomitrella paten...    49   2e-04
tr|A9QVI7|A9QVI7_9ASTR Heat shock protein 70 OS=Ageratina adenop...    49   2e-04
tr|A4UTL2|A4UTL2_9ASTR Heat shock protein 70 (Fragment) OS=Agera...    49   2e-04
tr|A3CDZ7|A3CDZ7_ORYSJ Putative uncharacterized protein OS=Oryza...    49   2e-04

>tr|Q41027|Q41027_PEA PsHSC71.0 OS=Pisum sativum PE=2 SV=1
          Length = 647

 Score = 59.3 bits (142), Expect = 9e-08
 Identities = 31/48 (64%), Positives = 34/48 (70%)
 Frame = +1

Query: 1   KELESVCNPIIARMYQGGAGPDMPPGAYSDEXXXXXXXXXXXKIEEVD 144
           KELESVCNPIIA+MYQGGAGPDM  GA +D+           KIEEVD
Sbjct: 602 KELESVCNPIIAKMYQGGAGPDM--GAAADDDAPTGGSGAGPKIEEVD 647


>tr|Q5QHT2|Q5QHT2_9FABA 70 kDa heat shock cognate protein 3 OS=Vigna
           radiata PE=2 SV=1
          Length = 650

 Score = 57.0 bits (136), Expect = 5e-07
 Identities = 32/51 (62%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
 Frame = +1

Query: 1   KELESVCNPIIARMYQGGAGPDM---PPGAYSDEXXXXXXXXXXXKIEEVD 144
           KELESVCNPIIA+MYQGGAGPDM   PP    DE           KIEEVD
Sbjct: 602 KELESVCNPIIAKMYQGGAGPDMGGAPPA--DDEYTPSGGSGAGPKIEEVD 650


>tr|A7PIU7|A7PIU7_VITVI Chromosome chr13 scaffold_17, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00018481001
           PE=3 SV=1
          Length = 650

 Score = 56.6 bits (135), Expect = 6e-07
 Identities = 27/48 (56%), Positives = 30/48 (62%)
 Frame = +1

Query: 1   KELESVCNPIIARMYQGGAGPDMPPGAYSDEXXXXXXXXXXXKIEEVD 144
           KELES+CNPIIA+MYQG  GPD   GA  D+           KIEEVD
Sbjct: 603 KELESICNPIIAKMYQGAGGPDAGAGAMDDDGPSAGGSGAGPKIEEVD 650


>tr|Q5QHT3|Q5QHT3_9FABA 70 kDa heat shock cognate protein 2 OS=Vigna
           radiata PE=2 SV=1
          Length = 648

 Score = 56.2 bits (134), Expect = 8e-07
 Identities = 29/48 (60%), Positives = 32/48 (66%)
 Frame = +1

Query: 1   KELESVCNPIIARMYQGGAGPDMPPGAYSDEXXXXXXXXXXXKIEEVD 144
           KELES+CNPIIA+MYQGGAGPDM  G   D+           KIEEVD
Sbjct: 603 KELESICNPIIAKMYQGGAGPDM--GGGMDDDVPAGGSGAGPKIEEVD 648


>tr|Q2HT97|Q2HT97_MEDTR Heat shock protein Hsp70 OS=Medicago
           truncatula GN=MtrDRAFT_AC150776g9v2 PE=3 SV=1
          Length = 649

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 29/48 (60%), Positives = 31/48 (64%)
 Frame = +1

Query: 1   KELESVCNPIIARMYQGGAGPDMPPGAYSDEXXXXXXXXXXXKIEEVD 144
           KELE VCNPIIA+MYQGGAGPDM   A  D+           KIEEVD
Sbjct: 603 KELEGVCNPIIAKMYQGGAGPDM-GAAPGDDDAPSHAGGAGPKIEEVD 649


>tr|A7PNK8|A7PNK8_VITVI Chromosome chr8 scaffold_23, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021301001
           PE=3 SV=1
          Length = 649

 Score = 51.6 bits (122), Expect = 2e-05
 Identities = 26/48 (54%), Positives = 30/48 (62%)
 Frame = +1

Query: 1   KELESVCNPIIARMYQGGAGPDMPPGAYSDEXXXXXXXXXXXKIEEVD 144
           KELES+CNPIIA+MYQG  GPDM  G   ++           KIEEVD
Sbjct: 603 KELESICNPIIAKMYQGAGGPDM-GGGMDEDGPSAGGSGAGPKIEEVD 649


>tr|Q40151|Q40151_SOLLC Hsc70 OS=Solanum lycopersicum GN=Hsc70 PE=3
           SV=1
          Length = 651

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 28/49 (57%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
 Frame = +1

Query: 1   KELESVCNPIIARMYQGGAGPDMPPGAYSD-EXXXXXXXXXXXKIEEVD 144
           KELES+CNPIIA+MYQG AGPDM  G   D             KIEEVD
Sbjct: 603 KELESICNPIIAKMYQGRAGPDMAGGMDEDGPSAGASSAGAGPKIEEVD 651


>tr|B6SZ69|B6SZ69_MAIZE Heat shock cognate 70 kDa protein 2 OS=Zea
           mays PE=2 SV=1
          Length = 649

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 26/48 (54%), Positives = 29/48 (60%)
 Frame = +1

Query: 1   KELESVCNPIIARMYQGGAGPDMPPGAYSDEXXXXXXXXXXXKIEEVD 144
           KELE +CNPIIA+MYQG AGPDM  G    +           KIEEVD
Sbjct: 603 KELEGICNPIIAKMYQGAAGPDM-AGGMDQDASPAGGSGAGPKIEEVD 649


>tr|Q9S9I7|Q9S9I7_MAIZE Heat shock protein 70 homolog OS=Zea mays
           PE=3 SV=1
          Length = 121

 Score = 50.8 bits (120), Expect = 3e-05
 Identities = 27/48 (56%), Positives = 29/48 (60%)
 Frame = +1

Query: 1   KELESVCNPIIARMYQGGAGPDMPPGAYSDEXXXXXXXXXXXKIEEVD 144
           KELE +CNPIIA+MYQG AGPDM  G   D            KIEEVD
Sbjct: 75  KELEGICNPIIAKMYQGAAGPDMAGGMDRDR-SPAGGSGAGPKIEEVD 121


>tr|Q9M4E7|Q9M4E7_CUCSA Heat shock protein 70 OS=Cucumis sativus
           PE=2 SV=1
          Length = 652

 Score = 50.4 bits (119), Expect = 4e-05
 Identities = 26/50 (52%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1   KELESVCNPIIARMYQGGAGPDMPPGAYSDE--XXXXXXXXXXXKIEEVD 144
           KELES+CNPI+A+MYQG  GP M  GA  D+             KIEEVD
Sbjct: 603 KELESICNPIVAKMYQGAGGPGMGGGAMDDDDAPPPSGGSGAGPKIEEVD 652