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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK943639
Clone id YMU02A01NGRL0003_H15
Library
Length 786
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_H15. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GTGAGAGAACGGACTGTCCTTCTCCTCCCGTTCTTCTGTCTCTGTGCAAGCTAAGCTGCC
ATGGCTGCCGTTGTGTTGGAAGGTGCACAGAAGCCTGTCTGCTTCCCTGATTTGAGAGAC
AAGGCCATCATCTTCGAGGGTGAGCTGGCAGCTGCCAAGGCCATTGAGCTCTATGAGGGA
TATGGTCTCCCCAATGGGCTCGTCCCCTTGAAGAATGTGGTGGAGGGTGGGTGGGTGGAA
GAGACTGGCTTTGTGTGGCTGGTCATCAATGAGTCTCAGAAGCATCACTTTGCGAAGGCG
GACCGCACTTGCAGCTACGACGAACTCATCACTTGCACCATCTCGATGAAGAGGATGAAG
GATATCCATGGAGTGAAGGCTAAGGAGCTTACTCTGTGGGTGCCAATCAATGAGATACTG
GTGGATGAGAAGAACTCTGACAAGATTACATTCAAGAGCATCATGTGCCTCTCGCGCACA
TTCCCATTCGACAACTTCGTCCTCGATGCGTAGCGTCCCCCTCCCCCCCTCCCCCCCCTC
CCTCCATATTATGAATTACAGCCATTCCCATTGCAATTAAATTTACCTGGGGAAAACCTT
CTGTCCCTCTCCTTAACCTTCATTGGTTGGGAATACCCCCTTTATTCAGGGGGCCCCCCT
TTTAAAAAAAGCAAAAAACTTTCTCTAAAGGACCTTTTTTACCCTTCCCCCCGCCAAAAG
GCTTGCCTCTTTCTTTTTCCTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAA
■■Homology search results ■■ -
sp_hit_id Q96PJ5
Definition sp|Q96PJ5|FCRL4_HUMAN Fc receptor-like protein 4 OS=Homo sapiens
Align length 16
Score (bit) 31.6
E-value 4.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943639|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_H15, 5'
         (748 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q96PJ5|FCRL4_HUMAN Fc receptor-like protein 4 OS=Homo sapiens...    32   4.8  
sp|Q80YF9|TCGAP_MOUSE TC10/CDC42 GTPase-activating protein OS=Mu...    31   8.3  
sp|Q91ZB0|ALPK2_MOUSE Alpha-protein kinase 2 OS=Mus musculus GN=...    31   8.3  

>sp|Q96PJ5|FCRL4_HUMAN Fc receptor-like protein 4 OS=Homo sapiens
           GN=FCRL4 PE=1 SV=1
          Length = 515

 Score = 31.6 bits (70), Expect = 4.8
 Identities = 13/16 (81%), Positives = 13/16 (81%)
 Frame = -3

Query: 251 KPVSSTHPPSTTFFKG 204
           KPV S HPP TTFFKG
Sbjct: 22  KPVISVHPPWTTFFKG 37


>sp|Q80YF9|TCGAP_MOUSE TC10/CDC42 GTPase-activating protein OS=Mus
            musculus GN=Snx26 PE=1 SV=1
          Length = 1305

 Score = 30.8 bits (68), Expect = 8.3
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -1

Query: 202  RAHWGDHIPHRAQWPWQLP 146
            RA WG H PHR   PW  P
Sbjct: 1230 RAPWGPHTPHRVPGPWGSP 1248


>sp|Q91ZB0|ALPK2_MOUSE Alpha-protein kinase 2 OS=Mus musculus
           GN=Alpk2 PE=2 SV=2
          Length = 1921

 Score = 30.8 bits (68), Expect = 8.3
 Identities = 24/83 (28%), Positives = 36/83 (43%)
 Frame = -2

Query: 252 KASLFHPPTLHHILQGDEPIGETISLIELNGLGSCQLTLEDDGLVSQIREADRLLCTFQH 73
           ++S F   T H +    E   E +SL +  GL SC  +L+ +G  ++ R+    L     
Sbjct: 438 ESSTFAGATTHSVSNLSEINRENLSLAQYPGLESCPQSLQQEGRPNRDRDLPGALWA--- 494

Query: 72  NGSHGSLACTETEEREEKDSPFS 4
             S   L+  E  E EE   P S
Sbjct: 495 -ESACELSLLEDNEEEESQPPAS 516
tr_hit_id A2ZLP6
Definition tr|A2ZLP6|A2ZLP6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica
Align length 131
Score (bit) 113.0
E-value 1.0e-23
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943639|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_H15, 5'
         (748 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A2ZLP6|A2ZLP6_ORYSI Putative uncharacterized protein OS=Oryza...   113   1e-23
tr|Q2QNJ0|Q2QNJ0_ORYSJ Os12g0563600 protein OS=Oryza sativa subs...   112   3e-23
tr|B8RIK0|B8RIK0_PINPO Putative uncharacterized protein 175 (Fra...   112   3e-23
tr|B8RIJ5|B8RIJ5_PINCO Putative uncharacterized protein 175 (Fra...   112   3e-23
tr|B7FM98|B7FM98_MEDTR Putative uncharacterized protein OS=Medic...   112   3e-23
tr|B8RHW0|B8RHW0_PINSY Putative uncharacterized protein 175 (Fra...   111   6e-23
tr|B8RIK1|B8RIK1_PINRE Putative uncharacterized protein 175 (Fra...   110   8e-23
tr|B8RIJ9|B8RIJ9_PINPS Putative uncharacterized protein 175 (Fra...   110   8e-23
tr|B8RIJ7|B8RIJ7_9CONI Putative uncharacterized protein 175 (Fra...   110   8e-23
tr|B8RI02|B8RI02_PINSY Putative uncharacterized protein 175 (Fra...   110   8e-23
tr|B8RIK2|B8RIK2_9CONI Putative uncharacterized protein 175 (Fra...   110   1e-22
tr|B8RIJ8|B8RIJ8_PINPE Putative uncharacterized protein 175 (Fra...   110   1e-22
tr|B8RIJ6|B8RIJ6_PINLA Putative uncharacterized protein 175 (Fra...   110   1e-22
tr|B8RHZ9|B8RHZ9_PINSY Putative uncharacterized protein 175 (Fra...   110   1e-22
tr|B7FN32|B7FN32_MEDTR Putative uncharacterized protein OS=Medic...   110   1e-22
tr|B8RHW8|B8RHW8_PINSY Putative uncharacterized protein 175 (Fra...   109   2e-22
tr|A9P131|A9P131_PICSI Putative uncharacterized protein OS=Picea...   109   2e-22
tr|A9PCV4|A9PCV4_POPTR Putative uncharacterized protein OS=Popul...   108   3e-22
tr|B8RHZ8|B8RHZ8_PINSY Putative uncharacterized protein 175 (Fra...   108   4e-22
tr|B8RHZ7|B8RHZ7_PINSY Putative uncharacterized protein 175 (Fra...   108   4e-22
tr|B8RIK3|B8RIK3_PICAB Putative uncharacterized protein 175 (Fra...   105   3e-21
tr|A9TTD6|A9TTD6_PHYPA Predicted protein OS=Physcomitrella paten...   104   5e-21
tr|A9NZQ7|A9NZQ7_PICSI Putative uncharacterized protein OS=Picea...   104   5e-21
tr|A9NQ66|A9NQ66_PICSI Putative uncharacterized protein OS=Picea...   104   7e-21
tr|A2WTA7|A2WTA7_ORYSI Putative uncharacterized protein OS=Oryza...   103   1e-20
tr|Q8RUR8|Q8RUR8_ORYSJ Putative uncharacterized protein OSJNBb00...   103   2e-20
tr|Q0JKS5|Q0JKS5_ORYSJ Os01g0652700 protein OS=Oryza sativa subs...   103   2e-20
tr|A7QWJ1|A7QWJ1_VITVI Chromosome chr10 scaffold_204, whole geno...   103   2e-20
tr|A9PF14|A9PF14_POPTR Putative uncharacterized protein OS=Popul...   102   2e-20
tr|A9S675|A9S675_PHYPA Predicted protein OS=Physcomitrella paten...   102   3e-20

>tr|A2ZLP6|A2ZLP6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_38742 PE=4 SV=1
          Length = 203

 Score =  113 bits (283), Expect = 1e-23
 Identities = 61/131 (46%), Positives = 84/131 (64%), Gaps = 1/131 (0%)
 Frame = +1

Query: 109 DLRDKAIIFEGELAAAKAIELY-EGYGLPNGLVPLKNVVEGGWVEETGFVWLVINESQKH 285
           D+R KA ++ G+ A  +   L  E  GLP+GL+PL++++E G+VEETGFVWL       H
Sbjct: 8   DVRAKAEVYVGDEAGQEKTRLLLEETGLPSGLLPLRDIIECGYVEETGFVWLKQRRKVDH 67

Query: 286 HFAKADRTCSYDELITCTISMKRMKDIHGVKAKELTLWVPINEILVDEKNSDKITFKSIM 465
            FAKA R  SY   ++      R++ I GVKAKEL +WV ++EI VDE  + K+T K+I 
Sbjct: 68  FFAKAGRHVSYAAEVSAVAEKGRLRKITGVKAKELLIWVTLHEIAVDEPPTGKLTCKAIG 127

Query: 466 CLSRTFPFDNF 498
            LSR+FP D F
Sbjct: 128 GLSRSFPVDAF 138


>tr|Q2QNJ0|Q2QNJ0_ORYSJ Os12g0563600 protein OS=Oryza sativa subsp.
           japonica GN=Os12g0563600 PE=4 SV=1
          Length = 203

 Score =  112 bits (280), Expect = 3e-23
 Identities = 60/131 (45%), Positives = 84/131 (64%), Gaps = 1/131 (0%)
 Frame = +1

Query: 109 DLRDKAIIFEGELAAAKAIELY-EGYGLPNGLVPLKNVVEGGWVEETGFVWLVINESQKH 285
           D+R KA ++ G+ A  +   L  E  GLP+GL+PL++++E G+VEETGFVWL       H
Sbjct: 8   DVRAKAEVYVGDEAGQEKTRLLLEETGLPSGLLPLRDIIECGYVEETGFVWLKQRRKVDH 67

Query: 286 HFAKADRTCSYDELITCTISMKRMKDIHGVKAKELTLWVPINEILVDEKNSDKITFKSIM 465
            FAKA R  SY   ++      R++ I GVKAKEL +WV ++EI VD+  + K+T K+I 
Sbjct: 68  FFAKAGRHVSYAAEVSAVAEKGRLRKITGVKAKELLIWVTLHEIAVDDPPTGKLTCKAIG 127

Query: 466 CLSRTFPFDNF 498
            LSR+FP D F
Sbjct: 128 GLSRSFPVDAF 138


>tr|B8RIK0|B8RIK0_PINPO Putative uncharacterized protein 175
           (Fragment) OS=Pinus ponderosa GN=175 PE=4 SV=1
          Length = 145

 Score =  112 bits (279), Expect = 3e-23
 Identities = 56/134 (41%), Positives = 84/134 (62%), Gaps = 1/134 (0%)
 Frame = +1

Query: 109 DLRDKAIIFEG-ELAAAKAIELYEGYGLPNGLVPLKNVVEGGWVEETGFVWLVINESQKH 285
           D R  A IF G E+   K++EL    GLP GL+PL+++ E G+V+ETGFVWL   +  +H
Sbjct: 7   DQRSGAEIFHGSEICKQKSMELLAEMGLPKGLLPLEDLEESGYVKETGFVWLKQKKKTEH 66

Query: 286 HFAKADRTCSYDELITCTISMKRMKDIHGVKAKELTLWVPINEILVDEKNSDKITFKSIM 465
           +F K  +   Y   IT  +   +MK + GVK+KEL LW+ I+EI +D+ +S KI FKS+ 
Sbjct: 67  YFKKIGKMVQYGTEITAYVEQNKMKKLTGVKSKELLLWITISEISIDDPSSGKIYFKSVT 126

Query: 466 CLSRTFPFDNFVLD 507
            + ++FP   F ++
Sbjct: 127 GIGKSFPTSAFEIE 140


>tr|B8RIJ5|B8RIJ5_PINCO Putative uncharacterized protein 175
           (Fragment) OS=Pinus contorta GN=175 PE=4 SV=1
          Length = 145

 Score =  112 bits (279), Expect = 3e-23
 Identities = 56/134 (41%), Positives = 84/134 (62%), Gaps = 1/134 (0%)
 Frame = +1

Query: 109 DLRDKAIIFEG-ELAAAKAIELYEGYGLPNGLVPLKNVVEGGWVEETGFVWLVINESQKH 285
           D R  A IF G E+   K++EL    GLP GL+PL+++ E G+V+ETGFVWL   +  +H
Sbjct: 7   DQRSGAEIFHGSEICKQKSMELLAEMGLPKGLLPLEDLEESGYVKETGFVWLKQKKKTEH 66

Query: 286 HFAKADRTCSYDELITCTISMKRMKDIHGVKAKELTLWVPINEILVDEKNSDKITFKSIM 465
           +F K  +   Y   IT  +   +MK + GVK+KEL LW+ I+EI +D+ +S KI FKS+ 
Sbjct: 67  YFKKIGKMVQYGTEITAYVEQNKMKKLTGVKSKELLLWITISEISIDDPSSGKIYFKSVT 126

Query: 466 CLSRTFPFDNFVLD 507
            + ++FP   F ++
Sbjct: 127 GIGKSFPTSAFEIE 140


>tr|B7FM98|B7FM98_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 173

 Score =  112 bits (279), Expect = 3e-23
 Identities = 56/134 (41%), Positives = 86/134 (64%), Gaps = 1/134 (0%)
 Frame = +1

Query: 109 DLRDKAIIFEG-ELAAAKAIELYEGYGLPNGLVPLKNVVEGGWVEETGFVWLVINESQKH 285
           ++R K+ ++ G E+  AK+ EL     LPNGL+PLK++ E G+  E+GFVWL    S  H
Sbjct: 7   EIRGKSEVYNGDEICQAKSKELLLEINLPNGLLPLKDIEECGYHRESGFVWLKQKASYTH 66

Query: 286 HFAKADRTCSYDELITCTISMKRMKDIHGVKAKELTLWVPINEILVDEKNSDKITFKSIM 465
            F K DR  +Y   +T T+ + ++K + GVK KEL +W+P++EI +D+  + KITF++I 
Sbjct: 67  KFEKVDRLVTYGTEVTATVEVGKIKKLTGVKVKELLVWLPLHEIQLDDPPTGKITFRAIT 126

Query: 466 CLSRTFPFDNFVLD 507
            L RTFP   F ++
Sbjct: 127 GLFRTFPASAFEIE 140


>tr|B8RHW0|B8RHW0_PINSY Putative uncharacterized protein 175
           (Fragment) OS=Pinus sylvestris GN=175 PE=4 SV=1
          Length = 145

 Score =  111 bits (277), Expect = 6e-23
 Identities = 56/134 (41%), Positives = 84/134 (62%), Gaps = 1/134 (0%)
 Frame = +1

Query: 109 DLRDKAIIFEG-ELAAAKAIELYEGYGLPNGLVPLKNVVEGGWVEETGFVWLVINESQKH 285
           D R  A IF G E+   K+++L    GLP GL+PL+++ E G+V+ETGFVWL   +  +H
Sbjct: 7   DQRSGAEIFHGSEICKQKSMDLLAEMGLPKGLLPLEDLEESGYVKETGFVWLKQKKKTEH 66

Query: 286 HFAKADRTCSYDELITCTISMKRMKDIHGVKAKELTLWVPINEILVDEKNSDKITFKSIM 465
           +F K  +   Y   IT  +   +MK + GVK+KEL LWV I+EI +D+ +S KI FKS+ 
Sbjct: 67  YFKKIGKMVQYGTEITAYVEQNKMKKLTGVKSKELLLWVTISEISIDDPSSGKIYFKSVT 126

Query: 466 CLSRTFPFDNFVLD 507
            + ++FP   F ++
Sbjct: 127 GIGKSFPTSAFEIE 140


>tr|B8RIK1|B8RIK1_PINRE Putative uncharacterized protein 175
           (Fragment) OS=Pinus resinosa GN=175 PE=4 SV=1
          Length = 145

 Score =  110 bits (276), Expect = 8e-23
 Identities = 55/134 (41%), Positives = 84/134 (62%), Gaps = 1/134 (0%)
 Frame = +1

Query: 109 DLRDKAIIFEG-ELAAAKAIELYEGYGLPNGLVPLKNVVEGGWVEETGFVWLVINESQKH 285
           D R  A IF G E+   K+++L    GLP GL+PL+++ E G+V+ETGFVWL   +  +H
Sbjct: 7   DQRSGAEIFHGSEICKQKSMDLLAEMGLPKGLLPLEDLEESGYVKETGFVWLKQKKKTEH 66

Query: 286 HFAKADRTCSYDELITCTISMKRMKDIHGVKAKELTLWVPINEILVDEKNSDKITFKSIM 465
           +F K  +   Y   IT  +   +MK + GVK+KEL LW+ I+EI +D+ +S KI FKS+ 
Sbjct: 67  YFKKIGKMVQYGTEITAYVEQNKMKKLTGVKSKELLLWITISEISIDDPSSGKIYFKSVT 126

Query: 466 CLSRTFPFDNFVLD 507
            + ++FP   F ++
Sbjct: 127 GIGKSFPTSAFEIE 140


>tr|B8RIJ9|B8RIJ9_PINPS Putative uncharacterized protein 175
           (Fragment) OS=Pinus pinaster GN=175 PE=4 SV=1
          Length = 145

 Score =  110 bits (276), Expect = 8e-23
 Identities = 56/134 (41%), Positives = 84/134 (62%), Gaps = 1/134 (0%)
 Frame = +1

Query: 109 DLRDKAIIFEG-ELAAAKAIELYEGYGLPNGLVPLKNVVEGGWVEETGFVWLVINESQKH 285
           D R  A IF G E+   K+++L    GLP GL+PL+++ E G+V+ETGFVWL   +  +H
Sbjct: 7   DQRSGAEIFHGSEICKQKSMDLLAEMGLPKGLLPLEDLEESGYVKETGFVWLKQKKKTEH 66

Query: 286 HFAKADRTCSYDELITCTISMKRMKDIHGVKAKELTLWVPINEILVDEKNSDKITFKSIM 465
           +F K  +   Y   IT  +   +MK + GVK+KEL LWV I+EI +D+ +S KI FKS+ 
Sbjct: 67  YFKKIGKMVQYGTEITAYVEQHKMKKLTGVKSKELLLWVTISEISIDDPSSGKIYFKSVT 126

Query: 466 CLSRTFPFDNFVLD 507
            + ++FP   F ++
Sbjct: 127 GIGKSFPTSAFEIE 140


>tr|B8RIJ7|B8RIJ7_9CONI Putative uncharacterized protein 175
           (Fragment) OS=Pinus nigra GN=175 PE=4 SV=1
          Length = 145

 Score =  110 bits (276), Expect = 8e-23
 Identities = 55/134 (41%), Positives = 84/134 (62%), Gaps = 1/134 (0%)
 Frame = +1

Query: 109 DLRDKAIIFEG-ELAAAKAIELYEGYGLPNGLVPLKNVVEGGWVEETGFVWLVINESQKH 285
           D R  A IF G E+   K+++L    GLP GL+PL+++ E G+V+ETGFVWL   +  +H
Sbjct: 7   DQRSGAEIFHGSEICKQKSMDLLAEMGLPKGLLPLEDLEESGYVKETGFVWLKQKKKTEH 66

Query: 286 HFAKADRTCSYDELITCTISMKRMKDIHGVKAKELTLWVPINEILVDEKNSDKITFKSIM 465
           +F K  +   Y   IT  +   +MK + GVK+KEL LW+ I+EI +D+ +S KI FKS+ 
Sbjct: 67  YFKKIGKMVQYGTEITAYVEQNKMKKLTGVKSKELLLWITISEISIDDPSSGKIYFKSVT 126

Query: 466 CLSRTFPFDNFVLD 507
            + ++FP   F ++
Sbjct: 127 GIGKSFPTSAFEIE 140


>tr|B8RI02|B8RI02_PINSY Putative uncharacterized protein 175
           (Fragment) OS=Pinus sylvestris GN=175 PE=4 SV=1
          Length = 145

 Score =  110 bits (276), Expect = 8e-23
 Identities = 55/134 (41%), Positives = 84/134 (62%), Gaps = 1/134 (0%)
 Frame = +1

Query: 109 DLRDKAIIFEG-ELAAAKAIELYEGYGLPNGLVPLKNVVEGGWVEETGFVWLVINESQKH 285
           D R  A IF G E+   K+++L    GLP GL+PL+++ E G+V+ETGFVWL   +  +H
Sbjct: 7   DQRSGAEIFHGSEICKQKSMDLLAEMGLPKGLLPLEDLEESGYVKETGFVWLKQKKKTEH 66

Query: 286 HFAKADRTCSYDELITCTISMKRMKDIHGVKAKELTLWVPINEILVDEKNSDKITFKSIM 465
           +F K  +   Y   IT  +   +MK + GVK+KEL LW+ I+EI +D+ +S KI FKS+ 
Sbjct: 67  YFKKIGKMVQYGTEITAYVEQNKMKKLTGVKSKELLLWITISEISIDDPSSGKIYFKSVT 126

Query: 466 CLSRTFPFDNFVLD 507
            + ++FP   F ++
Sbjct: 127 GIGKSFPTSAFEIE 140