BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943649|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_I03, 5'
         (242 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943649|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_I03, 5'
         (242 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8KWQ6|Q8KWQ6_EHRRU RNA polymerase beta subunit (Fragment) OS...    35   2.4  

>tr|Q8KWQ6|Q8KWQ6_EHRRU RNA polymerase beta subunit (Fragment)
           OS=Ehrlichia ruminantium GN=rpoB PE=3 SV=1
          Length = 519

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
 Frame = +3

Query: 9   ISTSG*INHEENLWVDV*YS*LFVTKHQIINLVKKVVINKSW--FVKIIEHL 158
           +ST G I   ++L +D+      +TK  II+++KKV I K W  FV  I+HL
Sbjct: 42  LSTVGRIKLNDHLGLDISEDVTVLTKDDIIHVIKKVSIAKRWGRFVDDIDHL 93