DK943659
Clone id YMU02A01NGRL0003_I15
Library
Length 321
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_I15. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
ATACAGACTCCAACCACCCTCCCCAGACCTGTCCTAAGGATCAAAACCTCCCGGAAAGTG
TCTCTACCTCTTACGAAGCTCATCACAATGTGTCTAACCACAAACGCGCCGCAACTTGTC
TCTGATGAGAATGAGTCCAGCAGCAAAGCTAAAACAGCTGAAGTGAGTTCTGGGCGGCAT
CACCAACAAGCCTATTTCAGCTAATGCGTATAGTGCGACGAACGCGGGGAAAGACGACCC
GTCACGAATGGTTATCAACTACAATAAGGCCCTTCTCGAATGCATACAATGCAACGTTAT
TGTATTGCACCAAACTATTGG
■■Homology search results ■■ -
sp_hit_id P33862
Definition sp|P33862|VE02_VARV Protein E2 OS=Variola virus
Align length 27
Score (bit) 30.0
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943659|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_I15, 5'
(321 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P33862|VE02_VARV Protein E2 OS=Variola virus GN=E2L PE=3 SV=1 30 3.7
sp|P21604|VE02_VACCW Protein E2 OS=Vaccinia virus (strain Wester... 30 3.7
sp|P21080|VE02_VACCC Protein E2 OS=Vaccinia virus (strain Copenh... 30 3.7
sp|Q10310|MUG68_SCHPO Meiotically up-regulated gene 68 protein O... 29 8.2
sp|P27020|MATRX_PI4HB Matrix protein OS=Human parainfluenza 4b v... 29 8.2
sp|P27019|MATRX_PI4HA Matrix protein OS=Human parainfluenza 4a v... 29 8.2

>sp|P33862|VE02_VARV Protein E2 OS=Variola virus GN=E2L PE=3 SV=1
Length = 737

Score = 30.0 bits (66), Expect = 3.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3

Query: 42 QNLPESVSTSYEAHHNVSNHKRAATCL 122
QNL +VS YE + +SN++ A CL
Sbjct: 612 QNLGNAVSNKYELEYTISNYQAAINCL 638


>sp|P21604|VE02_VACCW Protein E2 OS=Vaccinia virus (strain Western
Reserve) GN=E2L PE=3 SV=2
Length = 737

Score = 30.0 bits (66), Expect = 3.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3

Query: 42 QNLPESVSTSYEAHHNVSNHKRAATCL 122
QNL +VS YE + +SN++ A CL
Sbjct: 612 QNLGNAVSNKYELEYTISNYQAAINCL 638


>sp|P21080|VE02_VACCC Protein E2 OS=Vaccinia virus (strain
Copenhagen) GN=E2L PE=3 SV=1
Length = 737

Score = 30.0 bits (66), Expect = 3.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3

Query: 42 QNLPESVSTSYEAHHNVSNHKRAATCL 122
QNL +VS YE + +SN++ A CL
Sbjct: 612 QNLGNAVSNKYELEYTISNYQAAINCL 638


>sp|Q10310|MUG68_SCHPO Meiotically up-regulated gene 68 protein
OS=Schizosaccharomyces pombe GN=mug68 PE=1 SV=1
Length = 515

Score = 28.9 bits (63), Expect = 8.2
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 6/46 (13%)
Frame = +1

Query: 37 RIKTSRKVSLPLTKLITMCLTTNAPQLVSDEN------ESSSKAKT 156
+ ++ +K+ L LTK IT L+ PQL EN +SS++AKT
Sbjct: 43 KYESQQKLLLKLTKAITEYLSNLKPQLSKQENIYVKHIKSSNEAKT 88


>sp|P27020|MATRX_PI4HB Matrix protein OS=Human parainfluenza 4b
virus (strain 68-333) GN=M PE=2 SV=1
Length = 382

Score = 28.9 bits (63), Expect = 8.2
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 11/72 (15%)
Frame = +1

Query: 19 LPRPVLRIKTSRKVSLPLTKLITMCLTTNAP---QLVSDENESSSKAKT----AEVSSGR 177
+PRP+L +++R + L ++ + + N+P L++D+ E+ KA + GR
Sbjct: 190 VPRPILNFRSTRMRGIHLEIIMKITCSENSPIRKTLITDDPENGPKASVWIHLCNLYKGR 249

Query: 178 H----HQQAYFS 201
+ + +AYF+
Sbjct: 250 NPIKVYDEAYFA 261


>sp|P27019|MATRX_PI4HA Matrix protein OS=Human parainfluenza 4a
virus (strain Toshiba) GN=M PE=3 SV=1
Length = 382

Score = 28.9 bits (63), Expect = 8.2
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 11/72 (15%)
Frame = +1

Query: 19 LPRPVLRIKTSRKVSLPLTKLITMCLTTNAP---QLVSDENESSSKAKT----AEVSSGR 177
+PRPVL +++R + L ++ + + N+P L++D+ E+ KA + GR
Sbjct: 190 VPRPVLNFRSTRMRGIHLEIIMKITCSENSPIRKTLITDDLENGPKASVWIHLCNLYKGR 249

Query: 178 H----HQQAYFS 201
+ + +AYF+
Sbjct: 250 NPIKIYDEAYFA 261


tr_hit_id B1KQ69
Definition tr|B1KQ69|B1KQ69_SHEWM Protein-disulfide isomerase-like protein OS=Shewanella woodyi (strain ATCC 51908 / MS32)
Align length 49
Score (bit) 33.1
E-value 7.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943659|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_I15, 5'
(321 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B1KQ69|B1KQ69_SHEWM Protein-disulfide isomerase-like protein ... 33 7.0

>tr|B1KQ69|B1KQ69_SHEWM Protein-disulfide isomerase-like protein
OS=Shewanella woodyi (strain ATCC 51908 / MS32)
GN=Swoo_0426 PE=3 SV=1
Length = 515

Score = 33.1 bits (74), Expect = 7.0
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1

Query: 43 KTSRKVSLPLTKLITMCLTTNAPQLVSDENESSSKAKTAEVSSGRHHQQ 189
+++ +SL L L+ C + PQL S E +K ++ SG HQQ
Sbjct: 3 RSTLNLSLILALLLVACSDSEQPQLSSTELNERKVSKQLDIDSGNRHQQ 51