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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK943696
Clone id YMU02A01NGRL0003_K11
Library
Length 535
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_K11. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
CGTCCGGAACAAAAGTCGTCTTGCATTTCCGGAATAAGTCTCCCGACCCCTTGCTTTCCA
CCAAGAGAAAGCAAAAAGAACCCGGGCGGGAAAGTTTGATTTGGTCAATCTCCTTGCCCC
TCCGAACTAAGTGGCGACGAAACCGATCTTCGTATCGAGATGCGGGTGGGTCCTGTTGCT
TCGGTGTCCCCCGAAGCTAAATCTATCAAAAGAAAAGGAAATCCTTGGGAAATTTAATAT
TCCCTAGTACCAATCCGTAAAAATGGAATGTAAATCCTGGGATTGTTGACTACTAAGAGT
CTCTCTTATCATTCTATGGAGTTTCCATAGATAGGTAAGGTCGTAAGTCCCACCTTTTCT
ATTTTCCCCTCTCCAAACCAAGGGTGGGGCGGCAAAGAAGATATTGGGTCTCGCCCCAAT
GCGGTACTCANAGAATAGTCTTACGGGATAGAGAAGAAGGAGGGGTAGGAAGTGGCGGCT
TAGACTGATACACGGACGTGATTCGTCTCACAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9ASY9
Definition sp|Q9ASY9|PM36_ARATH Seed maturation protein PM36 homolog OS=Arabidopsis thaliana
Align length 46
Score (bit) 32.7
E-value 1.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943696|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_K11, 5'
         (511 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ASY9|PM36_ARATH Seed maturation protein PM36 homolog OS=Ara...    33   1.0  
sp|Q6A7M3|Y1495_PROAC UPF0090 protein PPA1495 OS=Propionibacteri...    31   3.8  
sp|A1DNV8|YD156_NEOFI WD repeat-containing protein NFIA_058290 O...    30   5.0  
sp|Q6C8W4|PLPL_YARLI Patatin-like phospholipase domain-containin...    30   6.5  
sp|Q6NRW0|MTBP_XENLA Mdm2-binding protein OS=Xenopus laevis GN=m...    30   6.5  
sp|Q0P4G8|MTBP_XENTR Mdm2-binding protein OS=Xenopus tropicalis ...    30   8.5  
sp|A8G5V0|COBQ_PROM2 Cobyric acid synthase OS=Prochlorococcus ma...    30   8.5  

>sp|Q9ASY9|PM36_ARATH Seed maturation protein PM36 homolog
           OS=Arabidopsis thaliana GN=At3g16990 PE=1 SV=2
          Length = 221

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 17/46 (36%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
 Frame = +1

Query: 130 SGDETDLRIEMRVGPVASVSPEAKSIKRKGNPWEI*YS-LVPIRKN 264
           SG+ +D+  E+ +G +AS++ E +  KR+G+ W++ +S +VP R N
Sbjct: 69  SGESSDM--EVVLGGIASLNDEIEWFKREGSKWDVDFSTVVPQRAN 112


>sp|Q6A7M3|Y1495_PROAC UPF0090 protein PPA1495 OS=Propionibacterium
           acnes GN=PPA1495 PE=3 SV=1
          Length = 178

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = +1

Query: 25  ISGISLPTPCFPPRESKKNPGGKV*FGQSPCPSELSGDETDLRIEMRVGPVASVSPEAKS 204
           +S   + TP   PR  ++N G  V F  +P   + SG+  D RI      V ++  EA++
Sbjct: 80  VSSRGVSTPLTQPRHYRRNIGHLVRFTLNPAEEQKSGETFDGRIAEAGEEVVTLEVEAEN 139

Query: 205 IK 210
            K
Sbjct: 140 SK 141


>sp|A1DNV8|YD156_NEOFI WD repeat-containing protein NFIA_058290
           OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
           NRRL 181) GN=NFIA_058290 PE=3 SV=1
          Length = 527

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
 Frame = +1

Query: 55  FPPRESKKNPGGKV*FGQSPCPSELSGDETDL---RIEMRVGPVASVSPEAK 201
           FPP+ ++ +PGG     + P P ++  ++ DL   R+  R+  +A+ S  AK
Sbjct: 38  FPPKSARSSPGGLTKPKKKPAPKKVKKEDEDLVPRRMSSRLRGLAADSEVAK 89


>sp|Q6C8W4|PLPL_YARLI Patatin-like phospholipase domain-containing
           protein YALI0D16379g OS=Yarrowia lipolytica
           GN=YALI0D16379g PE=3 SV=1
          Length = 818

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = -2

Query: 375 WRGENRKGGTYDLTYLWKLHRMIRETLSSQQSQDLHSI 262
           WR EN K G YD   + KL +M+R+     Q++DL +I
Sbjct: 292 WR-ENPKFGYYDHVTISKLTKMVRKLRLQDQAEDLSNI 328


>sp|Q6NRW0|MTBP_XENLA Mdm2-binding protein OS=Xenopus laevis GN=mtbp
           PE=2 SV=1
          Length = 860

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = -1

Query: 172 DPPA-SRYEDRFRRHLVRRGKEIDQIKLSRPGSFC--FLLVESKGSGDLFRKCKTTFV 8
           +PPA  R   ++R ++ R+ K+I    +   G +C  + L++ KGSG     CK T +
Sbjct: 335 NPPALQRSSKKWREYMSRKPKDIKVPGVELKGEYCSYYFLIQGKGSG----LCKATLL 388


>sp|Q0P4G8|MTBP_XENTR Mdm2-binding protein OS=Xenopus tropicalis
           GN=mtbp PE=2 SV=2
          Length = 867

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = -1

Query: 172 DPPA-SRYEDRFRRHLVRRGKEIDQIKLSRPGSFC--FLLVESKGSGDLFRKCKTTFV 8
           +PPA  R   ++R ++ R+ K+I    +   G +C  + L++ KGSG     CK T +
Sbjct: 339 NPPALQRSSKKWREYMSRKPKDIKVPGVELKGEYCSYYFLIQGKGSG----FCKATLL 392


>sp|A8G5V0|COBQ_PROM2 Cobyric acid synthase OS=Prochlorococcus
           marinus (strain MIT 9215) GN=cobQ PE=3 SV=2
          Length = 509

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 27/84 (32%), Positives = 36/84 (42%)
 Frame = -2

Query: 405 NIFFAAPPLVWRGENRKGGTYDLTYLWKLHRMIRETLSSQQSQDLHSIFTDWY*GILNFP 226
           N  F    L W  EN KGGT   TY   +H +      S + Q ++ I       ILN  
Sbjct: 425 NPIFEDLDLGWFKENNKGGTIAGTY---IHGIFEN--DSWREQYINLIRKSKNLPILNKK 479

Query: 225 RISFSFDRFSFGGHRSNRTHPHLD 154
            IS+   R S   + +N  H HL+
Sbjct: 480 SISYKKKRESIIDNLANEFHKHLN 503
tr_hit_id Q7UIE7
Definition tr|Q7UIE7|Q7UIE7_RHOBA Putative uncharacterized protein OS=Rhodopirellula baltica
Align length 41
Score (bit) 35.4
E-value 1.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943696|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_K11, 5'
         (511 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q7UIE7|Q7UIE7_RHOBA Putative uncharacterized protein OS=Rhodo...    35   1.6  
tr|A1CQJ5|A1CQJ5_ASPCL Putative uncharacterized protein OS=Asper...    35   1.6  
tr|B6KNM5|B6KNM5_TOXGO Putative uncharacterized protein OS=Toxop...    35   2.8  
tr|B6KD79|B6KD79_TOXGO Putative uncharacterized protein OS=Toxop...    34   4.8  

>tr|Q7UIE7|Q7UIE7_RHOBA Putative uncharacterized protein
           OS=Rhodopirellula baltica GN=RB12581 PE=4 SV=1
          Length = 174

 Score = 35.4 bits (80), Expect = 1.6
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +3

Query: 21  LHFRNKSPDPLLSTKRKQKEPGRESLIWSISLPLRTKWRRN 143
           L  RN+SP+PLL T  + K   R  + W+    +R  WR +
Sbjct: 133 LDARNRSPNPLLKTSWRMKANSRSRITWTPKTKIRDGWRNS 173


>tr|A1CQJ5|A1CQJ5_ASPCL Putative uncharacterized protein
           OS=Aspergillus clavatus GN=ACLA_026330 PE=4 SV=1
          Length = 577

 Score = 35.4 bits (80), Expect = 1.6
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
 Frame = -2

Query: 417 GARPNIFFAAPPLVWRGENRKGGTYDLTYLWKLHRMIRETLSSQQSQDLHSIFTDWY*GI 238
           G+RP + FA  P+  +G N  G  Y L Y W+L   +  + +     D+  I+  W  G+
Sbjct: 168 GSRPQLLFAVLPIADKGANFSGKHYVLCYDWRLRTFLARSFNWLPG-DIRDIWAVWSEGL 226

Query: 237 ----LNFPRI 220
               +  PR+
Sbjct: 227 TVYTITIPRL 236


>tr|B6KNM5|B6KNM5_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii ME49 GN=TGME49_053930 PE=4 SV=1
          Length = 1857

 Score = 34.7 bits (78), Expect = 2.8
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = +1

Query: 22  CISGISLPTPCFPPRESKKNPGGKV*FGQSPCP 120
           C+ G S PTPC P    +  PGG+   G SPCP
Sbjct: 52  CLEGASEPTPC-PAGTFRDQPGGEALDGCSPCP 83


>tr|B6KD79|B6KD79_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii ME49 GN=TGME49_071360 PE=4 SV=1
          Length = 464

 Score = 33.9 bits (76), Expect = 4.8
 Identities = 22/69 (31%), Positives = 33/69 (47%)
 Frame = +1

Query: 7   EQKSSCISGISLPTPCFPPRESKKNPGGKV*FGQSPCPSELSGDETDLRIEMRVGPVASV 186
           E +  C+S  + P+   P   SK   GG    G+  C +  +  ET  R   R  P+AS+
Sbjct: 46  ELQKQCLSSSAAPSFSSPFSSSKPASGGSKRSGRRRCGAGAA--ETAERPSARAAPLASL 103

Query: 187 SPEAKSIKR 213
           SP A ++ R
Sbjct: 104 SPAASALSR 112