DK943705
Clone id YMU02A01NGRL0003_K23
Library
Length 492
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_K23. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
GAAGCAGTGGTATCAACGCAGAGTGGCCATTACGGCCGGGGGGGTTGCAACAGCTGAAGC
AAAGGCAAATCGGCTCTCAGAGAGAGAGAGAGAGAGTTTGTGTGTGTGTGTGTGTGTGTG
TGTGAAGGGCGTAACCATGCAGGGAGCTTGCGGCCTGGGAAGAGGCAATGCAATGAGGTC
GAGCACCACTCCCTCATCCCCCACCAACTCCTCTCCCCTCTTCCTACCTCCTTCCATTTT
TACCTTGTTTTTAATTTTGGGCCTTACACTCTTCTTCTTCCACTCCTCTTAATTGAGTAT
TTCTATTCAAGGGATCTTAGAACCTTATCAAGAGGATAAAGCTTTTATTCAATGCTCTTA
GCCTAGTTACTAGGCTTTCTTGTTCATTAAGTTCCAATGTAATCAGCGAGTCCTTTGGTG
CTCGATTACTGTATGAGGATGTTGGATTATTGCTTCTTGCAGAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P48633
Definition sp|P48633|HMWP2_YERE8 High-molecular-weight protein 2 OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081)
Align length 24
Score (bit) 29.3
E-value 6.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943705|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_K23, 5'
(422 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P48633|HMWP2_YERE8 High-molecular-weight protein 2 OS=Yersini... 29 6.6

>sp|P48633|HMWP2_YERE8 High-molecular-weight protein 2 OS=Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
GN=irp2 PE=3 SV=1
Length = 2035

Score = 29.3 bits (64), Expect = 6.6
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3

Query: 135 EVEHHSLIPHQLLSPLPTSFHFYL 206
E+EH P QLL PLP +F YL
Sbjct: 1635 ELEHGYRYPQQLLPPLPVTFRDYL 1658


tr_hit_id B3C5Z3
Definition tr|B3C5Z3|B3C5Z3_9BACE Putative uncharacterized protein OS=Bacteroides intestinalis DSM 17393
Align length 44
Score (bit) 33.5
E-value 5.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943705|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_K23, 5'
(422 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B3C5Z3|B3C5Z3_9BACE Putative uncharacterized protein OS=Bacte... 33 5.4
tr|B6WNF6|B6WNF6_9BACE Putative uncharacterized protein OS=Bacte... 33 7.0
tr|B4JES3|B4JES3_DROGR GH19176 OS=Drosophila grimshawi GN=GH1917... 33 7.0

>tr|B3C5Z3|B3C5Z3_9BACE Putative uncharacterized protein
OS=Bacteroides intestinalis DSM 17393 GN=BACINT_00327
PE=4 SV=1
Length = 774

Score = 33.5 bits (75), Expect = 5.4
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = -1

Query: 248 EEWKKKSVRPKIKNKVKMEGGRKRGEELV---GDEGVVLDLIAL 126
EEWK+ +R + KVK+ +++ +LV DEGVVLD I L
Sbjct: 730 EEWKENVLRNQAIRKVKLPVSKRKSHKLVIKALDEGVVLDQIML 773


>tr|B6WNF6|B6WNF6_9BACE Putative uncharacterized protein
OS=Bacteroides finegoldii DSM 17565 GN=BACFIN_04070 PE=4
SV=1
Length = 797

Score = 33.1 bits (74), Expect = 7.0
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = -1

Query: 248 EEWKKKSVRPKIKNKVKMEGGRKRGEELVG---DEGVVLDLIALPLPRP 111
EEWK+ +R + V++ K+ +LV DEGV+LD + L +P P
Sbjct: 746 EEWKENVLRNQAIRTVRLPISGKKSHKLVIKALDEGVILDQVMLYMPSP 794


>tr|B4JES3|B4JES3_DROGR GH19176 OS=Drosophila grimshawi GN=GH19176
PE=4 SV=1
Length = 245

Score = 33.1 bits (74), Expect = 7.0
Identities = 12/47 (25%), Positives = 29/47 (61%)
Frame = -1

Query: 245 EWKKKSVRPKIKNKVKMEGGRKRGEELVGDEGVVLDLIALPLPRPQA 105
+W++KS+ ++ K+K+E G+ + L E +V++ + +P+ +A
Sbjct: 27 DWREKSIEEALELKIKLESGQIDPKSLAETERIVIEPVRSEIPKQEA 73