BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943723|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_L22, 5'
         (708 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A2APU8|CI14B_MOUSE Transmembrane protein C9orf144B homolog OS...    32   2.6  
sp|Q8WHX1|YCF1_PSINU Putative membrane protein ycf1 OS=Psilotum ...    32   2.6  
sp|Q09563|YR47_CAEEL Kelch repeat and BTB domain-containing prot...    30   9.8  

>sp|A2APU8|CI14B_MOUSE Transmembrane protein C9orf144B homolog
           OS=Mus musculus PE=4 SV=1
          Length = 1308

 Score = 32.3 bits (72), Expect = 2.6
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +3

Query: 390 THEDKLEKVWERTRPFYTLSFFGTPGFSFKPLEKEICPFPLH 515
           +H     K W + +P  TL FFG PG  F  L +E+   P H
Sbjct: 534 SHTQYKHKPWNKAKPRETLKFFG-PGKPFSALTRELFFIPQH 574


>sp|Q8WHX1|YCF1_PSINU Putative membrane protein ycf1 OS=Psilotum nudum
            GN=ycf1 PE=3 SV=1
          Length = 1703

 Score = 32.3 bits (72), Expect = 2.6
 Identities = 15/70 (21%), Positives = 36/70 (51%)
 Frame = +1

Query: 331  VPNKLQPGSMPREWRGEWKPHMKTNWKKCGKEPDLSTLFLSLALPVFLSSLLKRKSVPSL 510
            + +K++ G +P++W+ E K   K+N  K  K  +  TL       ++ ++ + ++ + + 
Sbjct: 1243 ISSKIEYGIVPQKWKNEVKKRWKSNTNKLDKNKEYKTLEKENKYSLYETNNMLKQRINNR 1302

Query: 511  FTSCKILHLL 540
               C+  +LL
Sbjct: 1303 NNYCEFYNLL 1312


>sp|Q09563|YR47_CAEEL Kelch repeat and BTB domain-containing protein
           F47D12.7 OS=Caenorhabditis elegans GN=F47D12.7 PE=2 SV=1
          Length = 579

 Score = 30.4 bits (67), Expect = 9.8
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
 Frame = +3

Query: 291 PGPTTQRNLSNFSCTQQVATWLY-AKGVEGRMETTHEDKLE---KVWE 422
           P PT Q   SNFS  Q    ++Y A G +G+  T   ++L+   K+W+
Sbjct: 493 PEPTLQTARSNFSACQMDTCYVYVAGGFDGQTTTKESERLDLRSKMWQ 540

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943723|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_L22, 5'
         (708 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9N3V6|A9N3V6_SALPB Putative uncharacterized protein OS=Salmo...    36   2.8  

>tr|A9N3V6|A9N3V6_SALPB Putative uncharacterized protein
           OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
           GN=SPAB_05417 PE=4 SV=1
          Length = 407

 Score = 35.8 bits (81), Expect = 2.8
 Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
 Frame = +1

Query: 265 RWMCGCVRTQVRQPSGIFQISVVPNKLQPGSMPREWRGEWKPHMKTNWKKCGKEPDLSTL 444
           RW  GC  +     S +  IS+  NK + G+ PRE   +   H++ ++ KCG    L  L
Sbjct: 166 RWGVGCY-SLFALISILLCISLPDNKRERGAAPREPTEQGIQHLERDYLKCGLYAALMAL 224

Query: 445 --FLSLALPVFLSSLLKRKSVPSLFTS 519
             FLS  +   L  +L    VP L  S
Sbjct: 225 LSFLSTGISTHLPLILASAGVPVLVGS 251