DK943735 |
Clone id |
YMU02A01NGRL0003_M10 |
Library |
YMU02 |
Length |
444 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_M10. 5' end sequence. |
Accession |
DK943735 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
- |
Sequence |
GGGGGCTCCAATTGCTGGATCTGCAGTTGATAAGGTCGAAAAAGTAGTGGCCTATGTCGG GCTGGGCTACCCTTTTGGGCGCTTAGCATCGATACTATTGGGTCGACATCAGAAACCCAT TCTGGAATCGAATAAACCTAAACTGTTTGTGATGGGCACTCGTGATGGGTTCACAACTGT GAAGCAGCTAGAGAACAAGCTGAAATCGGCAGCTGGACGGGTCGAAACACACTTAGTACC AGGTGTTGGCCACTTTGAGATGGAAGGACCTGACCATGATGATCAAATGGCAACATTGAT TGTAGATTTTTCAAAAACAGTTTAGCTGTACTTAATGTAAAGACTAACTCCCTTGTACAA CATGAGGACCATTTAGGGTGTACTGACCCGGCATTGTTTTATGCTTTTCTGATATAAAGG GGACATGTATAATGGCACTTGTGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9Z7Q1 |
Definition |
sp|Q9Z7Q1|LNT_CHLPN Apolipoprotein N-acyltransferase OS=Chlamydia pneumoniae |
Align length |
66 |
Score (bit) |
32.0 |
E-value |
1.2 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943735|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0003_M10, 5' (444 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9Z7Q1|LNT_CHLPN Apolipoprotein N-acyltransferase OS=Chlamydi... 32 1.2 sp|P37736|FUR_VIBAN Ferric uptake regulation protein OS=Vibrio a... 32 1.2 sp|O85207|PHAG_PSEPK (R)-3-hydroxydecanoyl-ACP:CoA transacylase ... 32 1.5 sp|P33117|FUR_VIBVU Ferric uptake regulation protein OS=Vibrio v... 32 1.5 sp|P0C6C8|FUR_VIBCH Ferric uptake regulation protein OS=Vibrio c... 30 3.4 sp|Q9H6B9|ABHD9_HUMAN Abhydrolase domain-containing protein 9 OS... 30 3.4 sp|Q9KJH8|PHAG_PSEOL (R)-3-hydroxydecanoyl-ACP:CoA transacylase ... 30 4.5 sp|P28776|I23O_MOUSE Indoleamine 2,3-dioxygenase OS=Mus musculus... 30 5.9 sp|O24755|FUR_VIBPA Ferric uptake regulation protein OS=Vibrio p... 30 5.9 sp|A4TEL3|RL13_MYCGI 50S ribosomal protein L13 OS=Mycobacterium ... 29 7.7 sp|Q49418|ESL2_MYCGE Putative esterase/lipase 2 OS=Mycoplasma ge... 29 7.7
>sp|Q9Z7Q1|LNT_CHLPN Apolipoprotein N-acyltransferase OS=Chlamydia pneumoniae GN=lnt PE=3 SV=1 Length = 541
Score = 32.0 bits (71), Expect = 1.2 Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Frame = -2
Query: 296 MLPFDHHGQVLPSQSGQHLVLSVFRPVQ-----LPISACSLAASQL*THHECPSQTV*VY 132 ++PF H QV P +S HL LS F P+ L S C+ A SQ H +CP + Sbjct: 266 VVPFGKHRQVYPYESCAHL-LSSFAPLPEGKAFLSNSDCATALSQ---HFQCPV----II 317
Query: 131 SIPEWV 114 + WV Sbjct: 318 GLERWV 323
>sp|P37736|FUR_VIBAN Ferric uptake regulation protein OS=Vibrio anguillarum GN=fur PE=1 SV=1 Length = 149
Score = 32.0 bits (71), Expect = 1.2 Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 4/105 (3%) Frame = +2
Query: 140 KLFVMGTRDGFTTVKQLENKLKSAAGRVETHLVPGVGHFEMEGPDHDDQMATL----IVD 307 KL +G G TV ++ N+ A H G FE+ H D + L +++ Sbjct: 42 KLIDLGEEIGLATVYRVLNQFDDAGIVTRHHFEGGKSVFELSTQHHHDHLVCLDCGEVIE 101
Query: 308 FSKTV*LYLM*RLTPLYNMRTI*GVLTRHCFMLF*YKGDMYNGTC 442 FS V + YN++ LT H L+ G +G+C Sbjct: 102 FSDEVIEQRQREIAEQYNVQ-----LTNHSLYLY---GKCADGSC 138
>sp|O85207|PHAG_PSEPK (R)-3-hydroxydecanoyl-ACP:CoA transacylase OS=Pseudomonas putida (strain KT2440) GN=phaG PE=4 SV=1 Length = 295
Score = 31.6 bits (70), Expect = 1.5 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Frame = +2
Query: 131 NKPKLFVMGTRDGFTTVKQLENKLKSAAGRVETHLVPGVGHF-EMEGPDHDDQMATLIVD 307 N P LF+ G RD +TTV+ + GR + ++ GHF +ME + +++ Sbjct: 212 NIPVLFINGERDEYTTVED-ARQFSKHVGRSQFSVIRDAGHFLDMENKTACENTRNVMLG 270
Query: 308 FSK 316 F K Sbjct: 271 FLK 273
>sp|P33117|FUR_VIBVU Ferric uptake regulation protein OS=Vibrio vulnificus GN=fur PE=3 SV=2 Length = 149
Score = 31.6 bits (70), Expect = 1.5 Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 4/105 (3%) Frame = +2
Query: 140 KLFVMGTRDGFTTVKQLENKLKSAAGRVETHLVPGVGHFEMEGPDHDDQMATL----IVD 307 KL +G G TV ++ N+ A H G FE+ H D + L +++ Sbjct: 42 KLIDLGEEIGLATVYRVLNQFDDAGIVTRHHFEGGKSVFELSTQHHHDHLVCLDCGEVIE 101
Query: 308 FSKTV*LYLM*RLTPLYNMRTI*GVLTRHCFMLF*YKGDMYNGTC 442 FS + + YN++ LT H L+ GD G+C Sbjct: 102 FSDDIIEERQKEIAAAYNVQ-----LTNHSLYLYGKCGD---GSC 138
>sp|P0C6C8|FUR_VIBCH Ferric uptake regulation protein OS=Vibrio cholerae GN=fur PE=3 SV=1 Length = 150
Score = 30.4 bits (67), Expect = 3.4 Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 4/105 (3%) Frame = +2
Query: 140 KLFVMGTRDGFTTVKQLENKLKSAAGRVETHLVPGVGHFEMEGPDHDDQMATL----IVD 307 KL +G G TV ++ N+ A H G FE+ H D + L +++ Sbjct: 42 KLIDLGEEIGLATVYRVLNQFDDAGIVTRHHFEGGKSVFELSTQHHHDHLVCLDCGEVIE 101
Query: 308 FSKTV*LYLM*RLTPLYNMRTI*GVLTRHCFMLF*YKGDMYNGTC 442 FS V + YN++ LT H L+ G +G+C Sbjct: 102 FSDDVIEQRQKEIAAKYNVQ-----LTNHSLYLYGKCGS--DGSC 139
>sp|Q9H6B9|ABHD9_HUMAN Abhydrolase domain-containing protein 9 OS=Homo sapiens GN=ABHD9 PE=2 SV=1 Length = 360
Score = 30.4 bits (67), Expect = 3.4 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Frame = +2
Query: 125 ESNKPKLFVMGTRDGFTTVKQLEN-KLKSAAGRVETHLVPGVGHF 256 E P L + G +D + + +E + GR+E H++PG+GH+ Sbjct: 294 ELTTPTLLLWGEKDTYLELGLVEAIGSRFVPGRLEAHILPGIGHW 338
>sp|Q9KJH8|PHAG_PSEOL (R)-3-hydroxydecanoyl-ACP:CoA transacylase OS=Pseudomonas oleovorans GN=phaG PE=3 SV=1 Length = 295
Score = 30.0 bits (66), Expect = 4.5 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Frame = +2
Query: 137 PKLFVMGTRDGFTTVKQLENKLKSAAGRVETHLVPGVGHF-EMEGPDHDDQMATLIVDFS 313 P LF+ G RD +TTV+ + GR ++ GHF +ME + ++++ F Sbjct: 214 PVLFINGDRDEYTTVED-ARQFSKHVGRSHFSVIRDAGHFLDMENKTACEDTRSVMLGFL 272
Query: 314 K 316 K Sbjct: 273 K 273
>sp|P28776|I23O_MOUSE Indoleamine 2,3-dioxygenase OS=Mus musculus GN=Indo PE=1 SV=1 Length = 407
Score = 29.6 bits (65), Expect = 5.9 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = -3
Query: 310 KIYNQCCHLIIMVRSFHLKVANTW 239 K YN+C + ++ VR FHL + +T+ Sbjct: 334 KAYNECVNGLVSVRKFHLAIVDTY 357
>sp|O24755|FUR_VIBPA Ferric uptake regulation protein OS=Vibrio parahaemolyticus GN=fur PE=3 SV=1 Length = 149
Score = 29.6 bits (65), Expect = 5.9 Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 4/105 (3%) Frame = +2
Query: 140 KLFVMGTRDGFTTVKQLENKLKSAAGRVETHLVPGVGHFEMEGPDHDDQMATL----IVD 307 KL +G G TV ++ N+ A H G FE+ H D + L +++ Sbjct: 42 KLIDLGEEIGLATVYRVLNQFDDAGIVTRHHFEGGKSVFELSTQHHHDHLVCLDCGEVIE 101
Query: 308 FSKTV*LYLM*RLTPLYNMRTI*GVLTRHCFMLF*YKGDMYNGTC 442 FS + + YN+ LT H L+ G +G C Sbjct: 102 FSDDIIEERQREIAAKYNV-----TLTNHSLYLY---GKCSDGGC 138
>sp|A4TEL3|RL13_MYCGI 50S ribosomal protein L13 OS=Mycobacterium gilvum (strain PYR-GCK) GN=rplM PE=3 SV=1 Length = 147
Score = 29.3 bits (64), Expect = 7.7 Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 3/82 (3%) Frame = +2
Query: 29 DKVEKVVAYVGLGYPFG---RLASILLGRHQKPILESNKPKLFVMGTRDGFTTVKQLENK 199 DK+ K AY GYP G R LL +H ++E+ + G +Q++ K Sbjct: 67 DKLTKKFAYSHSGYPGGLRKRAIGDLLAKHPTRVVEN-----AITGMLPHTKLGRQIQKK 121
Query: 200 LKSAAGRVETHLVPGVGHFEME 265 LK AG H FE++ Sbjct: 122 LKVYAGPEHPHTAQQPVPFEIK 143
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SN84 |
Definition |
tr|A9SN84|A9SN84_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
107 |
Score (bit) |
159.0 |
E-value |
6.0e-38 |
Report |
|