BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943736|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_M11, 5'
         (379 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5QA93|HSV2_PICAN SVP1-like protein 2 OS=Pichia angusta GN=HS...    31   2.2  
sp|Q6AXJ7|CX039_DANRE Uncharacterized protein CXorf39 homolog OS...    31   2.2  
sp|Q0V6H6|SRB8_PHANO Mediator of RNA polymerase II transcription...    30   2.8  
sp|Q6GP60|CX39A_XENLA Uncharacterized protein CXorf39 homolog A ...    30   4.8  

>sp|Q5QA93|HSV2_PICAN SVP1-like protein 2 OS=Pichia angusta GN=HSV2
           PE=3 SV=1
          Length = 360

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -1

Query: 352 KATLHT-NTRSCQKQARSKLLRRGHVSSSCALLPHHFRCCWS 230
           K TLH  N  +   Q  S +  R H+ S+  L+P +FR  WS
Sbjct: 259 KNTLHVYNLTAADPQPESAMANRLHLLSAVPLMPTYFRSVWS 300


>sp|Q6AXJ7|CX039_DANRE Uncharacterized protein CXorf39 homolog
           OS=Danio rerio GN=zgc:101060 PE=2 SV=1
          Length = 374

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = -1

Query: 298 LLRRGHVSSSCALLPHHFRCCWSCCHRRHPSSCVSSSQWGL 176
           L +RG+ S    L    F C  S CHR  P     SS+W L
Sbjct: 19  LSQRGNFSEDATLDVSDFGCQLSSCHRTDPLHRFHSSRWNL 59


>sp|Q0V6H6|SRB8_PHANO Mediator of RNA polymerase II transcription
           subunit 12 OS=Phaeosphaeria nodorum GN=SRB8 PE=3 SV=1
          Length = 1547

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
 Frame = +3

Query: 81  SKQAQA---DCAERDGEDRRDAAHGGSSQRRRAP-*RPH 185
           SK A A   DC +   ED R AAH G+S+ R  P  RPH
Sbjct: 24  SKPANALPPDCIDPTLEDERPAAHNGASEARPPPRGRPH 62


>sp|Q6GP60|CX39A_XENLA Uncharacterized protein CXorf39 homolog A
           OS=Xenopus laevis PE=2 SV=1
          Length = 377

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -1

Query: 292 RRGHVSSSCALLPHHFRCCWSCCHRRHPSSCVSSSQWGL 176
           +RG VS    L    F C  S CHR  P    +S++W L
Sbjct: 22  QRGSVSEEGCLDVSDFGCQLSSCHRTDPLHRFNSNRWNL 60

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943736|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_M11, 5'
         (379 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6QDC8|Q6QDC8_MOUSE Putative cyclooxygenase 3 OS=Mus musculus...    34   4.1  
tr|A7QR01|A7QR01_VITVI Chromosome undetermined scaffold_147, who...    33   5.3  

>tr|Q6QDC8|Q6QDC8_MOUSE Putative cyclooxygenase 3 OS=Mus musculus
           GN=Ptgs1 PE=2 SV=1
          Length = 127

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 12/16 (75%), Positives = 12/16 (75%)
 Frame = -1

Query: 247 FRCCWSCCHRRHPSSC 200
           F CC SCC RRHP SC
Sbjct: 43  FPCCCSCCCRRHPRSC 58


>tr|A7QR01|A7QR01_VITVI Chromosome undetermined scaffold_147, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00003620001 PE=4 SV=1
          Length = 289

 Score = 33.5 bits (75), Expect = 5.3
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 253 HHFRCCWSCCHRRHPSSCVSSSQWGLHGALLLCDD 149
           HH RCC       H S+ ++  Q+GLH ++ +C D
Sbjct: 28  HHCRCCGRTLCHEHSSNQMALPQFGLHTSVRVCSD 62