DK943738 |
Clone id |
YMU02A01NGRL0003_M13 |
Library |
YMU02 |
Length |
683 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_M13. 5' end sequence. |
Accession |
DK943738 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
- |
Sequence |
GTATAAAACGTCAGCAGGAAATTGAGAACGAAATATATCTAGCAAGAGAGAAAAGTCTTG CAGATGCGAATTTTTACAGGGTCTTGAAGGAAGCGGAAGCAAACCAGCTAAAACTTACTC CACAATTCTTAGAGTTGAAGTTTATTGAAGCAATTGCCAACAACACAAAGATGTATTTTG GTGACAAGATACCAGGCATGGTTATGGACCAAAGACTTCTTGGGAACTTCCTCGCTAGAG AGGATGCCTGAAAATCAAAGTAGAGGTCCTTCATCAATGATGCACAAGAAACTGCACTAT TGAGAGTGATTTAGGTCTTGGGGGACAGGATTTTTTGGTCCCCATAACAAATGCAGGGCT CCAGTTCACACGGAAACCTCTATGCAGACAACAAGCTTGAACCTGTTTTACCGAATCTTT CAAGAGGCATGTTATTGAAGGCATCCCGGAAGAATTAAACTCATACGCAATTGGGAAGGA TACGATTGGGAAAGGATAGACTGAACATTTCTTTTTCAGTGCACAGGATTCAAAAAATGG CAGCTGTTGTTTTCTTGGAATGATAAACAAAACCTGTTCAAATTTTGGAAGAAACCCGAT ACGAGTTTTAGAGTGTAATATAATTTGCTATGGCTTTAGTTGAGCTCTTTTTTTTTTGGT CTAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q1RMU4 |
Definition |
sp|Q1RMU4|ERLN2_BOVIN Erlin-2 OS=Bos taurus |
Align length |
68 |
Score (bit) |
78.6 |
E-value |
3.0e-14 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RAY5 |
Definition |
tr|A9RAY5|A9RAY5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
81 |
Score (bit) |
135.0 |
E-value |
3.0e-30 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943738|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0003_M13, 5' (662 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RAY5|A9RAY5_PHYPA Predicted protein OS=Physcomitrella paten... 135 3e-30 tr|A9RZW1|A9RZW1_PHYPA Predicted protein OS=Physcomitrella paten... 132 2e-29 tr|A7P2G2|A7P2G2_VITVI Chromosome chr1 scaffold_5, whole genome ... 124 7e-27 tr|Q9ZQ87|Q9ZQ87_ARATH Expressed protein (Putative uncharacteriz... 122 2e-26 tr|Q84TE3|Q84TE3_ARATH At2g03510 OS=Arabidopsis thaliana PE=2 SV=1 122 2e-26 tr|Q0WU28|Q0WU28_ARATH Putative uncharacterized protein At2g0351... 122 2e-26 tr|B4FSS3|B4FSS3_MAIZE Putative uncharacterized protein OS=Zea m... 122 2e-26 tr|Q6ATM4|Q6ATM4_ORYSJ cDNA clone:J033121P04, full insert sequen... 120 7e-26 tr|Q0DR41|Q0DR41_ORYSJ Os03g0421400 protein (Fragment) OS=Oryza ... 120 7e-26 tr|B8AK41|B8AK41_ORYSI Putative uncharacterized protein OS=Oryza... 120 7e-26 tr|A3AJ76|A3AJ76_ORYSJ Putative uncharacterized protein OS=Oryza... 87 1e-15 tr|Q6DKC0|Q6DKC0_XENLA MGC84282 protein OS=Xenopus laevis GN=MGC... 78 4e-13 tr|Q5F3C5|Q5F3C5_CHICK Putative uncharacterized protein OS=Gallu... 78 4e-13 tr|B5DEH2|B5DEH2_RAT ER lipid raft associated 2 (SPFH domain fam... 78 4e-13 tr|A3QK16|A3QK16_DANRE Myxovirus (Influenza virus) resistance C ... 78 6e-13 tr|B8XSJ2|B8XSJ2_PIG ER lipid raft-associated 2 isoform 2 OS=Sus... 77 7e-13 tr|Q4SA80|Q4SA80_TETNG Chromosome 12 SCAF14692, whole genome sho... 76 2e-12 tr|B1WBY7|B1WBY7_RAT ER lipid raft associated 1 (SPFH domain fam... 76 2e-12 tr|B8XSJ1|B8XSJ1_PIG ER lipid raft-associated 1 OS=Sus scrofa GN... 76 2e-12 tr|Q58EG2|Q58EG2_DANRE Novel protein similar to vertebrate ER li... 75 3e-12 tr|B2RDK6|B2RDK6_HUMAN cDNA, FLJ96656, highly similar to Homo sa... 75 3e-12 tr|Q5XH03|Q5XH03_XENLA LOC495100 protein OS=Xenopus laevis GN=er... 75 4e-12 tr|Q28J34|Q28J34_XENTR SPFH domain family, member 2 (Putative un... 75 4e-12 tr|Q28DX1|Q28DX1_XENTR SPFH domain family, member 1 (SPFH domain... 75 4e-12 tr|A8NHP4|A8NHP4_BRUMA Putative uncharacterized protein OS=Brugi... 75 5e-12 tr|B4DPN7|B4DPN7_HUMAN cDNA FLJ57553, highly similar to SPFH dom... 74 1e-11 tr|B6P656|B6P656_BRAFL Putative uncharacterized protein (Fragmen... 72 2e-11 tr|A7T0H4|A7T0H4_NEMVE Predicted protein OS=Nematostella vectens... 72 4e-11 tr|A7SL73|A7SL73_NEMVE Predicted protein (Fragment) OS=Nematoste... 72 4e-11 tr|B6LRX3|B6LRX3_BRAFL Putative uncharacterized protein OS=Branc... 69 2e-10
>tr|A9RAY5|A9RAY5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_63697 PE=4 SV=1 Length = 352
Score = 135 bits (339), Expect = 3e-30 Identities = 63/81 (77%), Positives = 76/81 (93%) Frame = +3
Query: 3 IKRQQEIENEIYLAREKSLADANFYRVLKEAEANQLKLTPQFLELKFIEAIANNTKMYFG 182 IK QQEIENEI+LA+EKSLADANFYRV+KEA+AN+LKLTP+FLELKFIEA+ANNTKM+FG Sbjct: 267 IKTQQEIENEIFLAKEKSLADANFYRVMKEAKANELKLTPEFLELKFIEAVANNTKMFFG 326
Query: 183 DKIPGMVMDQRLLGNFLARED 245 +K+P MV+DQRLLGN+ E+ Sbjct: 327 EKLPNMVLDQRLLGNYFGSEN 347
>tr|A9RZW1|A9RZW1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_122055 PE=4 SV=1 Length = 312
Score = 132 bits (332), Expect = 2e-29 Identities = 61/81 (75%), Positives = 76/81 (93%) Frame = +3
Query: 3 IKRQQEIENEIYLAREKSLADANFYRVLKEAEANQLKLTPQFLELKFIEAIANNTKMYFG 182 IKRQQEIENEI+LAREKSLADANFYRV++EA+AN+LKLTP+FLELKFIEA+ NN+KM+FG Sbjct: 227 IKRQQEIENEIFLAREKSLADANFYRVMREADANKLKLTPEFLELKFIEAVGNNSKMFFG 286
Query: 183 DKIPGMVMDQRLLGNFLARED 245 +K+P +V+DQRLLGN+ E+ Sbjct: 287 EKLPNIVLDQRLLGNYFGPEN 307
>tr|A7P2G2|A7P2G2_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030044001 PE=4 SV=1 Length = 296
Score = 124 bits (310), Expect = 7e-27 Identities = 56/76 (73%), Positives = 73/76 (96%) Frame = +3
Query: 6 KRQQEIENEIYLAREKSLADANFYRVLKEAEANQLKLTPQFLELKFIEAIANNTKMYFGD 185 + Q+EIEN++Y+AREKSLADA+FYR++KEAEAN+LKLTP++LEL+FIEAIANN+K++FG+ Sbjct: 208 RMQEEIENQMYMAREKSLADASFYRLMKEAEANKLKLTPEYLELRFIEAIANNSKIFFGN 267
Query: 186 KIPGMVMDQRLLGNFL 233 K+P MV DQRLLGNFL Sbjct: 268 KVPNMVFDQRLLGNFL 283
>tr|Q9ZQ87|Q9ZQ87_ARATH Expressed protein (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At2g03510 PE=2 SV=2 Length = 356
Score = 122 bits (307), Expect = 2e-26 Identities = 56/76 (73%), Positives = 72/76 (94%) Frame = +3
Query: 6 KRQQEIENEIYLAREKSLADANFYRVLKEAEANQLKLTPQFLELKFIEAIANNTKMYFGD 185 +R+ +IEN++YL R+KSLADA++YRVL+EAEAN+LKLTP+FLELKFI+AIA NTK++FGD Sbjct: 264 RREADIENQMYLDRQKSLADADYYRVLREAEANKLKLTPEFLELKFIDAIARNTKIFFGD 323
Query: 186 KIPGMVMDQRLLGNFL 233 K+P MV+DQRLLGNFL Sbjct: 324 KVPNMVLDQRLLGNFL 339
>tr|Q84TE3|Q84TE3_ARATH At2g03510 OS=Arabidopsis thaliana PE=2 SV=1 Length = 316
Score = 122 bits (307), Expect = 2e-26 Identities = 56/76 (73%), Positives = 72/76 (94%) Frame = +3
Query: 6 KRQQEIENEIYLAREKSLADANFYRVLKEAEANQLKLTPQFLELKFIEAIANNTKMYFGD 185 +R+ +IEN++YL R+KSLADA++YRVL+EAEAN+LKLTP+FLELKFI+AIA NTK++FGD Sbjct: 224 RREADIENQMYLDRQKSLADADYYRVLREAEANKLKLTPEFLELKFIDAIARNTKIFFGD 283
Query: 186 KIPGMVMDQRLLGNFL 233 K+P MV+DQRLLGNFL Sbjct: 284 KVPNMVLDQRLLGNFL 299
>tr|Q0WU28|Q0WU28_ARATH Putative uncharacterized protein At2g03510 (Fragment) OS=Arabidopsis thaliana GN=At2g03510 PE=2 SV=1 Length = 342
Score = 122 bits (307), Expect = 2e-26 Identities = 56/76 (73%), Positives = 72/76 (94%) Frame = +3
Query: 6 KRQQEIENEIYLAREKSLADANFYRVLKEAEANQLKLTPQFLELKFIEAIANNTKMYFGD 185 +R+ +IEN++YL R+KSLADA++YRVL+EAEAN+LKLTP+FLELKFI+AIA NTK++FGD Sbjct: 250 RREADIENQMYLDRQKSLADADYYRVLREAEANKLKLTPEFLELKFIDAIARNTKIFFGD 309
Query: 186 KIPGMVMDQRLLGNFL 233 K+P MV+DQRLLGNFL Sbjct: 310 KVPNMVLDQRLLGNFL 325
>tr|B4FSS3|B4FSS3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 371
Score = 122 bits (307), Expect = 2e-26 Identities = 54/76 (71%), Positives = 74/76 (97%) Frame = +3
Query: 6 KRQQEIENEIYLAREKSLADANFYRVLKEAEANQLKLTPQFLELKFIEAIANNTKMYFGD 185 KRQ++I+N++YLAREK++ADAN+YR+LKEAEAN+LKLTP++LEL+FIE+IANN+K++FG+ Sbjct: 285 KRQEQIDNDMYLAREKAVADANYYRILKEAEANRLKLTPEYLELRFIESIANNSKIFFGE 344
Query: 186 KIPGMVMDQRLLGNFL 233 KIP M+MDQRLL N+L Sbjct: 345 KIPNMIMDQRLLKNYL 360
>tr|Q6ATM4|Q6ATM4_ORYSJ cDNA clone:J033121P04, full insert sequence OS=Oryza sativa subsp. japonica GN=OSJNBb0021K20.18 PE=2 SV=1 Length = 374
Score = 120 bits (301), Expect = 7e-26 Identities = 53/76 (69%), Positives = 72/76 (94%) Frame = +3
Query: 6 KRQQEIENEIYLAREKSLADANFYRVLKEAEANQLKLTPQFLELKFIEAIANNTKMYFGD 185 KRQQ+I+NE++LAREK+L DAN+YR+ KEAEAN+LKLTP++LEL+FIE+IANN+K++FG+ Sbjct: 288 KRQQQIDNEMFLAREKALTDANYYRITKEAEANRLKLTPEYLELRFIESIANNSKIFFGE 347
Query: 186 KIPGMVMDQRLLGNFL 233 KIP M+MDQR+L N+L Sbjct: 348 KIPNMIMDQRMLRNYL 363
>tr|Q0DR41|Q0DR41_ORYSJ Os03g0421400 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os03g0421400 PE=4 SV=1 Length = 266
Score = 120 bits (301), Expect = 7e-26 Identities = 53/76 (69%), Positives = 72/76 (94%) Frame = +3
Query: 6 KRQQEIENEIYLAREKSLADANFYRVLKEAEANQLKLTPQFLELKFIEAIANNTKMYFGD 185 KRQQ+I+NE++LAREK+L DAN+YR+ KEAEAN+LKLTP++LEL+FIE+IANN+K++FG+ Sbjct: 180 KRQQQIDNEMFLAREKALTDANYYRITKEAEANRLKLTPEYLELRFIESIANNSKIFFGE 239
Query: 186 KIPGMVMDQRLLGNFL 233 KIP M+MDQR+L N+L Sbjct: 240 KIPNMIMDQRMLRNYL 255
>tr|B8AK41|B8AK41_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12095 PE=4 SV=1 Length = 374
Score = 120 bits (301), Expect = 7e-26 Identities = 53/76 (69%), Positives = 72/76 (94%) Frame = +3
Query: 6 KRQQEIENEIYLAREKSLADANFYRVLKEAEANQLKLTPQFLELKFIEAIANNTKMYFGD 185 KRQQ+I+NE++LAREK+L DAN+YR+ KEAEAN+LKLTP++LEL+FIE+IANN+K++FG+ Sbjct: 288 KRQQQIDNEMFLAREKALTDANYYRITKEAEANRLKLTPEYLELRFIESIANNSKIFFGE 347
Query: 186 KIPGMVMDQRLLGNFL 233 KIP M+MDQR+L N+L Sbjct: 348 KIPNMIMDQRMLRNYL 363
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