BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943739|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_M16, 5'
         (274 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P55505|Y4JE_RHISN Uncharacterized protein y4jE OS=Rhizobium s...    31   2.2  
sp|P38811|TRA1_YEAST Transcription-associated protein 1 OS=Sacch...    30   2.9  
sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1 OS=Ni...    30   2.9  
sp|Q8KTI4|SSRP_AZOVI SsrA-binding protein OS=Azotobacter vinelan...    29   8.4  

>sp|P55505|Y4JE_RHISN Uncharacterized protein y4jE OS=Rhizobium sp.
           (strain NGR234) GN=y4jE PE=4 SV=1
          Length = 273

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +1

Query: 76  CKWVQTIYYVLEPIQGEVETCIRGVDRQI 162
           C+W   + Y+  P+     TC  G DRQ+
Sbjct: 239 CRWEHVVAYLGSPLYESTSTCAEGADRQL 267


>sp|P38811|TRA1_YEAST Transcription-associated protein 1
            OS=Saccharomyces cerevisiae GN=TRA1 PE=1 SV=1
          Length = 3744

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +2

Query: 44   YF*FLLSVELGANGFKQFIMSLNQYKERWKHA*EGWIDR*PQTW*QILLW 193
            Y  FL + ++ AN     + +L+   +  K   + W DR P TW  + +W
Sbjct: 2849 YMEFLEATQIYANLHTTTVQNLDSKAQEIKRILQAWRDRLPNTWDDVNMW 2898


>sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1
           OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1
          Length = 1434

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 11/74 (14%)
 Frame = +2

Query: 53  FLLSVELGANGFKQFIMSLNQ----YKER-------WKHA*EGWIDR*PQTW*QILLWIV 199
           F + + +  NG  +  M++ +    YK+R       W +A   WI + P T  ++ LW++
Sbjct: 571 FFVVIMIMFNGMSELAMTIFKLPVFYKQRDLLFFPSWAYAIPSWILKIPVTLVEVGLWVI 630

Query: 200 RRGTYHLIQYLPHI 241
              TY++I + P+I
Sbjct: 631 L--TYYVIGFDPNI 642


>sp|Q8KTI4|SSRP_AZOVI SsrA-binding protein OS=Azotobacter vinelandii
           GN=smpB PE=3 SV=1
          Length = 160

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -2

Query: 141 YACFHLSLYWFKDIINC 91
           YAC  LSLYW K +I C
Sbjct: 107 YACVALSLYWKKHLIKC 123

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943739|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_M16, 5'
         (274 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******