DK943751 |
Clone id |
YMU02A01NGRL0003_N05 |
Library |
YMU02 |
Length |
534 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_N05. 5' end sequence. |
Accession |
DK943751 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL8Contig1 |
Sequence |
GTTCACAGAACTCCCTCACGTTCCTTTGCTTCGAAACGAGGGTAGGCACACCAGACACAA AATTGAGTGATGCGTAATACGGACGGAGGTTCGAATCCTCGCAAGGCGTCCGGAACAAAA GTCGTCTTGCATTTCCGGAATAAGTCTCCCGACCCCTTGCTTTCCACCAAGAGAAAGCAA AAAGAACCCGGGCGGGAAAGTTTGATTTGGTCAATCTCCTTGCCCCTCCGAACTAAGTGG CGACGAAACCGATCTTCGTATCGAGATGCGGATGGGTCCTGTTGCTTCGGTGTCCCCCGA AGCTAAATCTATCAAAAGAAAAGGAAATCCTTGGGAAATTTAATATTCCCTAGTACCAAT CCGTAAAAATGGAATGTAAATCCTGGGATTGTTGACTACTAAGAGTCTCTCTTATCATTC TATGGAGTTTCCATAGATAGGTAAGGTCGTAAGTCCCACCTTTTCTATTTTCCCCTCTCC AAACCAAGGGTGGGGCGGCAAAGAAGATATTGGGTCTCGCCCCAATGCGGTACT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9ASY9 |
Definition |
sp|Q9ASY9|PM36_ARATH Seed maturation protein PM36 homolog OS=Arabidopsis thaliana |
Align length |
46 |
Score (bit) |
33.1 |
E-value |
0.86 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943751|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0003_N05, 5' (534 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9ASY9|PM36_ARATH Seed maturation protein PM36 homolog OS=Ara... 33 0.86 sp|Q6NRW0|MTBP_XENLA Mdm2-binding protein OS=Xenopus laevis GN=m... 31 3.3 sp|A1DNV8|YD156_NEOFI WD repeat-containing protein NFIA_058290 O... 31 4.3 sp|Q6A7M3|Y1495_PROAC UPF0090 protein PPA1495 OS=Propionibacteri... 31 4.3 sp|Q0P4G8|MTBP_XENTR Mdm2-binding protein OS=Xenopus tropicalis ... 30 5.6 sp|Q6C8W4|PLPL_YARLI Patatin-like phospholipase domain-containin... 30 7.3 sp|Q6PJG2|CN043_HUMAN Uncharacterized protein C14orf43 OS=Homo s... 30 7.4 sp|O05528|FLII_CAUCR Flagellum-specific ATP synthase OS=Caulobac... 30 9.5 sp|A8G5V0|COBQ_PROM2 Cobyric acid synthase OS=Prochlorococcus ma... 30 9.5 sp|Q7TQN7|GP135_RAT Probable G-protein coupled receptor 135 OS=R... 30 9.7
>sp|Q9ASY9|PM36_ARATH Seed maturation protein PM36 homolog OS=Arabidopsis thaliana GN=At3g16990 PE=1 SV=2 Length = 221
Score = 33.1 bits (74), Expect = 0.86 Identities = 17/46 (36%), Positives = 32/46 (69%), Gaps = 1/46 (2%) Frame = +2
Query: 236 SGDETDLRIEMRMGPVASVSPEAKSIKRKGNPWEI*YS-LVPIRKN 370 SG+ +D+ E+ +G +AS++ E + KR+G+ W++ +S +VP R N Sbjct: 69 SGESSDM--EVVLGGIASLNDEIEWFKREGSKWDVDFSTVVPQRAN 112
>sp|Q6NRW0|MTBP_XENLA Mdm2-binding protein OS=Xenopus laevis GN=mtbp PE=2 SV=1 Length = 860
Score = 31.2 bits (69), Expect = 3.3 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 2/73 (2%) Frame = -2
Query: 275 PSASRYEDRFRRHLVRRGKEIDQIKLSRPGSFC--FLLVESKGSGDLFRKCKTTFVPDAL 102 P+ R ++R ++ R+ K+I + G +C + L++ KGSG CK T + A Sbjct: 337 PALQRSSKKWREYMSRKPKDIKVPGVELKGEYCSYYFLIQGKGSG----LCKATLLHSAS 392
Query: 101 RGFEPPSVLRITQ 63 + S+L + Q Sbjct: 393 QISGAASLLLLHQ 405
>sp|A1DNV8|YD156_NEOFI WD repeat-containing protein NFIA_058290 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181) GN=NFIA_058290 PE=3 SV=1 Length = 527
Score = 30.8 bits (68), Expect = 4.3 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%) Frame = +2
Query: 161 FPPRESKKNPGGKV*FGQSPCPSELSGDETDL---RIEMRMGPVASVSPEAK 307 FPP+ ++ +PGG + P P ++ ++ DL R+ R+ +A+ S AK Sbjct: 38 FPPKSARSSPGGLTKPKKKPAPKKVKKEDEDLVPRRMSSRLRGLAADSEVAK 89
>sp|Q6A7M3|Y1495_PROAC UPF0090 protein PPA1495 OS=Propionibacterium acnes GN=PPA1495 PE=3 SV=1 Length = 178
Score = 30.8 bits (68), Expect = 4.3 Identities = 19/62 (30%), Positives = 30/62 (48%) Frame = +2
Query: 131 ISGISLPTPCFPPRESKKNPGGKV*FGQSPCPSELSGDETDLRIEMRMGPVASVSPEAKS 310 +S + TP PR ++N G V F +P + SG+ D RI V ++ EA++ Sbjct: 80 VSSRGVSTPLTQPRHYRRNIGHLVRFTLNPAEEQKSGETFDGRIAEAGEEVVTLEVEAEN 139
Query: 311 IK 316 K Sbjct: 140 SK 141
>sp|Q0P4G8|MTBP_XENTR Mdm2-binding protein OS=Xenopus tropicalis GN=mtbp PE=2 SV=2 Length = 867
Score = 30.4 bits (67), Expect = 5.6 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Frame = -2
Query: 275 PSASRYEDRFRRHLVRRGKEIDQIKLSRPGSFC--FLLVESKGSGDLFRKCKTTFVPDA 105 P+ R ++R ++ R+ K+I + G +C + L++ KGSG CK T + A Sbjct: 341 PALQRSSKKWREYMSRKPKDIKVPGVELKGEYCSYYFLIQGKGSG----FCKATLLHSA 395
>sp|Q6C8W4|PLPL_YARLI Patatin-like phospholipase domain-containing protein YALI0D16379g OS=Yarrowia lipolytica GN=YALI0D16379g PE=3 SV=1 Length = 818
Score = 30.0 bits (66), Expect = 7.3 Identities = 16/38 (42%), Positives = 23/38 (60%) Frame = -3
Query: 481 WRGENRKGGTYDLTYLWKLHRMIRETLSSQQSQDLHSI 368 WR EN K G YD + KL +M+R+ Q++DL +I Sbjct: 292 WR-ENPKFGYYDHVTISKLTKMVRKLRLQDQAEDLSNI 328
>sp|Q6PJG2|CN043_HUMAN Uncharacterized protein C14orf43 OS=Homo sapiens GN=C14orf43 PE=1 SV=2 Length = 1045
Score = 30.0 bits (66), Expect = 7.4 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%) Frame = +1
Query: 73 RNTDGGSNPRK---ASGTKVVLHFRNKSPDPLLSTKRKQKEPGRESLIWSISLPLRT 234 ++ G RK AS TK + F +P L+TKR +++ G LI +S+P+RT Sbjct: 483 KDGSGSEEKRKSVLASTTKCGVEFS----EPSLATKRAREDSGMVPLIIPVSVPVRT 535
>sp|O05528|FLII_CAUCR Flagellum-specific ATP synthase OS=Caulobacter crescentus GN=fliI PE=3 SV=2 Length = 444
Score = 29.6 bits (65), Expect = 9.5 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +2
Query: 206 FGQSPCPSELSGDETDLRIEMRMGPVASVSPEAK 307 FGQ P P+E+ G + M GPV V P A+ Sbjct: 48 FGQKPLPAEVVGFRETRALLMPFGPVEGVGPGAE 81
>sp|A8G5V0|COBQ_PROM2 Cobyric acid synthase OS=Prochlorococcus marinus (strain MIT 9215) GN=cobQ PE=3 SV=2 Length = 509
Score = 29.6 bits (65), Expect = 9.5 Identities = 27/84 (32%), Positives = 36/84 (42%) Frame = -3
Query: 511 NIFFAAPPLVWRGENRKGGTYDLTYLWKLHRMIRETLSSQQSQDLHSIFTDWY*GILNFP 332 N F L W EN KGGT TY +H + S + Q ++ I ILN Sbjct: 425 NPIFEDLDLGWFKENNKGGTIAGTY---IHGIFEN--DSWREQYINLIRKSKNLPILNKK 479
Query: 331 RISFSFDRFSFGGHRSNRTHPHLD 260 IS+ R S + +N H HL+ Sbjct: 480 SISYKKKRESIIDNLANEFHKHLN 503
>sp|Q7TQN7|GP135_RAT Probable G-protein coupled receptor 135 OS=Rattus norvegicus GN=Gpr135 PE=2 SV=1 Length = 457
Score = 29.6 bits (65), Expect = 9.7 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 9/48 (18%) Frame = +1
Query: 91 SNPRKASGTKVV---------LHFRNKSPDPLLSTKRKQKEPGRESLI 207 SNP SG +VV L FR PDP+++ ++ K R+S I Sbjct: 410 SNPASGSGGEVVMWARKNPVVLFFREDPPDPVMAVYKQHKSETRDSSI 457
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8HLS9 |
Definition |
tr|B8HLS9|B8HLS9_9CHRO Metallophosphoesterase OS=Cyanothece sp. PCC 7425 |
Align length |
83 |
Score (bit) |
35.4 |
E-value |
1.8 |
Report |
|