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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK943757
Clone id YMU02A01NGRL0003_N13
Library
Length 496
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_N13. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence 
GGCACAAAAATTCATAATTGTATTGTTGGTCAAAGGCTGTTGAAAAAAGATGTTGTGCTT
GGTACTGCCTTCCAAATGTGGTGCGTTTGAGAAAGCACAAAAAGTGGTTGAGGAACTTTT
CGTCCAGAATGTCATCTTTTGGAATGCACTAATTGCAGGATACGCACGACAGAAAGCTCT
AGGTAGCTTTCAGTAATGCATCTCTCCAAATTCAGTCTGAATGTGACCTTCTACAAGCAA
GATGCTGATATGGACACAAAAATTCACAATTGTATTGTTAGTCGAAGGTTGTTGAGAAAA
GATGTCGTGCTTGGCACTGTCTTGGTCGACAAGTATGCAAAGCGAGGGTCTCTTTCCAGA
TGCAATTACCTTTGCACGTATCTTGAAGGCATGTGGCTCTACACAAGATGCTGATATGGG
CACAAAAACTCAGAAGTATATTGTGAGTTGGAGGCTATTGAAGAAGATGCCCTGCTTGGC
AGTATTGTCTTGGTCG
■■Homology search results ■■ -
sp_hit_id P0C899
Definition sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49140 OS=Arabidopsis thaliana
Align length 158
Score (bit) 50.1
E-value 6.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943757|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_N13, 5'
         (496 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containi...    50   6e-06
sp|Q9LFL5|PP390_ARATH Putative pentatricopeptide repeat-containi...    46   1e-04
sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protei...    46   1e-04
sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protei...    32   2e-04
sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protei...    40   2e-04
sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protei...    44   4e-04
sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protei...    43   7e-04
sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protei...    43   0.001
sp|Q0WNP3|PP319_ARATH Pentatricopeptide repeat-containing protei...    35   0.001
sp|Q9M9R6|PPR43_ARATH Pentatricopeptide repeat-containing protei...    42   0.001
sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protei...    42   0.001
sp|Q9FMA1|PP433_ARATH Pentatricopeptide repeat-containing protei...    41   0.003
sp|Q9SX45|PPR75_ARATH Pentatricopeptide repeat-containing protei...    40   0.005
sp|Q9ZUT5|PP191_ARATH Pentatricopeptide repeat-containing protei...    40   0.008
sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protei...    40   0.008
sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protei...    39   0.013
sp|Q1PEU4|PP201_ARATH Pentatricopeptide repeat-containing protei...    39   0.013
sp|Q9LJI9|PP260_ARATH Pentatricopeptide repeat-containing protei...    37   0.013
sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containi...    33   0.017
sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protei...    39   0.017
sp|Q9C9I3|PP115_ARATH Pentatricopeptide repeat-containing protei...    39   0.017
sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protei...    38   0.023
sp|Q9FGL1|PP423_ARATH Putative pentatricopeptide repeat-containi...    33   0.029
sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protei...    38   0.029
sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protei...    38   0.029
sp|Q9LVF9|PP245_ARATH Pentatricopeptide repeat-containing protei...    38   0.029
sp|Q9C866|PPR65_ARATH Pentatricopeptide repeat-containing protei...    37   0.039
sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protei...    37   0.039
sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containi...    37   0.039
sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protei...    37   0.039

>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing
           protein At3g49140 OS=Arabidopsis thaliana GN=PCMP-H77
           PE=3 SV=1
          Length = 686

 Score = 50.1 bits (118), Expect = 6e-06
 Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 26/158 (16%)
 Frame = +2

Query: 74  KCGAFEKAQKVVEELFVQNVIFWNALIAGYAR-QKALGSFQ*CISPNSV*M*PSTSKML- 247
           KCG   +A+ V++E+  ++V+ WN+L+ GYA+ Q+   + + C    SV +      M  
Sbjct: 187 KCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMAS 246

Query: 248 ----IWTQKFTIVLLVEGC*EKMSCLAL-SWS-------------------TSMQSEGLF 355
               +       V+ V+    KM   +L SW+                   + M+++G  
Sbjct: 247 LLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFE 306

Query: 356 PDAITFARILKACGSTQDADMGTKTQKYIVSWRLLKKM 469
           PDA++   +L ACG T    +G K   YI   +L+  +
Sbjct: 307 PDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL 344



 Score = 35.0 bits (79), Expect = 0.19
 Identities = 25/108 (23%), Positives = 38/108 (35%)
 Frame = +2

Query: 71  SKCGAFEKAQKVVEELFVQNVIFWNALIAGYARQKALGSFQ*CISPNSV*M*PSTSKMLI 250
           +KCG  EKA+ V E +  ++V+ W A+I+ Y                             
Sbjct: 355 AKCGCLEKARDVFENMKSRDVVSWTAMISAYGF--------------------------- 387

Query: 251 WTQKFTIVLLVEGC*EKMSCLALSWSTSMQSEGLFPDAITFARILKAC 394
                              C A++  + +Q  GL PD+I F   L AC
Sbjct: 388 ---------------SGRGCDAVALFSKLQDSGLVPDSIAFVTTLAAC 420


>sp|Q9LFL5|PP390_ARATH Putative pentatricopeptide repeat-containing
           protein At5g16860 OS=Arabidopsis thaliana GN=PCMP-H92
           PE=3 SV=1
          Length = 850

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
 Frame = +2

Query: 56  CLV-LPSKCGAFEKAQKVVEELFVQNVIFWNALIAGYARQKALGSFQ*CISPNSV*M*PS 232
           CLV + +KCG  ++A  V   + V++V+ WNA++AGY++   +G F+     ++V +   
Sbjct: 269 CLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQ---IGRFE-----DAVRLFEK 320

Query: 233 TSKMLIWTQKFTIVLLVEGC*EK-MSCLALSWSTSMQSEGLFPDAITFARILKACGSTQD 409
             +  I     T    + G  ++ +   AL     M S G+ P+ +T   +L  C S   
Sbjct: 321 MQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGA 380

Query: 410 ADMGTKTQKYIVSW 451
              G +   Y + +
Sbjct: 381 LMHGKEIHCYAIKY 394



 Score = 34.3 bits (77), Expect = 0.33
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +2

Query: 71  SKCGAFEKAQKVVEELFVQNVIFWNALIAGYAR 169
           S+C +   A+KV +E+ V +V+ WN++I  YA+
Sbjct: 173 SRCRSLSDARKVFDEMSVWDVVSWNSIIESYAK 205



 Score = 33.5 bits (75), Expect = 0.56
 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
 Frame = +2

Query: 56  CLV-LPSKCGAFEKAQKVVEELFVQNVIFWNALIAGYAR----QKALGSF 190
           CL+ + +KCG+   A+ V + +  +N + W +L+ GY      ++ALG F
Sbjct: 518 CLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIF 567


>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein
           At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=2 SV=1
          Length = 781

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 37/140 (26%), Positives = 54/140 (38%), Gaps = 5/140 (3%)
 Frame = +2

Query: 35  GC*KKMLCLVLPSKCGAFEKAQKVVEELFVQNVIFWNALIAGYARQKALGSFQ*CISPNS 214
           GC      L++  KCG+ E+A  + +E+  ++++ WN +IAGY+R    G          
Sbjct: 443 GCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRH-GFGE--------- 492

Query: 215 V*M*PSTSKMLIWTQKFTIVLLVEGC*EKMSCLALSWSTSMQSEGLFPDAITFARILKAC 394
                                           +AL +  SM+ EGL PD  T   +L AC
Sbjct: 493 --------------------------------VALRFFESMKREGLKPDDATMVAVLSAC 520

Query: 395 GSTQDADMG-----TKTQKY 439
             T   D G     T TQ Y
Sbjct: 521 SHTGLVDKGRQYFYTMTQDY 540



 Score = 35.8 bits (81), Expect = 0.11
 Identities = 14/35 (40%), Positives = 24/35 (68%)
 Frame = +2

Query: 80  GAFEKAQKVVEELFVQNVIFWNALIAGYARQKALG 184
           G FE A+K+ +E+  ++++ WN +I GY R + LG
Sbjct: 109 GEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLG 143



 Score = 30.0 bits (66), Expect = 6.1
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
 Frame = +2

Query: 80  GAFEKAQKVVE------ELFVQNVIFWNALIAGYAR 169
           G F K +K+VE       + V++V+ WN +I GYA+
Sbjct: 227 GGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQ 262


>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein
           At3g62890 OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
          Length = 573

 Score = 32.3 bits (72), Expect(2) = 2e-04
 Identities = 14/20 (70%), Positives = 16/20 (80%)
 Frame = +1

Query: 301 DVVLGTVLVDKYAKRGSLSR 360
           D+VLGT L+D YAK GSL R
Sbjct: 233 DIVLGTALIDMYAKCGSLER 252



 Score = 32.0 bits (71), Expect(2) = 2e-04
 Identities = 18/74 (24%), Positives = 36/74 (48%)
 Frame = +2

Query: 71  SKCGAFEKAQKVVEELFVQNVIFWNALIAGYARQKALGSFQ*CISPNSV*M*PSTSKMLI 250
           +K G  + A+K+ +E+  +NVI W+ LI GY      G ++  +        P  ++  +
Sbjct: 139 AKAGLIDDARKLFDEMPERNVISWSCLINGYV---MCGKYKEALDLFREMQLPKPNEAFV 195

Query: 251 WTQKFTIVLLVEGC 292
              +FT+  ++  C
Sbjct: 196 RPNEFTMSTVLSAC 209


>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein
           At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=2 SV=1
          Length = 697

 Score = 34.3 bits (77), Expect(2) = 2e-04
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
 Frame = +2

Query: 71  SKCGAFEKAQKVVEELFVQNVIFWNALIAGYARQ----KALGSFQ 193
           SKCG    AQ+V +E+  +NV+ WN+LI  + +     +AL  FQ
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQ 242



 Score = 29.6 bits (65), Expect(2) = 2e-04
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +1

Query: 259 KIHNCIVSRRLLRKDVVLGTVLVDKYAKRGSLSRCNYL 372
           ++H  +V    LR D++L    VD YAK   +    ++
Sbjct: 274 EVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFI 311



 Score = 40.0 bits (92), Expect = 0.006
 Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 1/125 (0%)
 Frame = +2

Query: 71  SKCGAFEKAQKVVEELFVQNVIFWNALIAGYARQKALGSFQ*CISPNSV*M*PSTSKMLI 250
           SKCG+ E  ++V +++  +N+  WN+++ G  +   L                S  + + 
Sbjct: 66  SKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEAD------------SLFRSMP 113

Query: 251 WTQKFTIVLLVEGC*EKMSC-LALSWSTSMQSEGLFPDAITFARILKACGSTQDADMGTK 427
              + T   +V G  +   C  AL +   M  EG   +  +FA +L AC    D + G +
Sbjct: 114 ERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQ 173

Query: 428 TQKYI 442
               I
Sbjct: 174 VHSLI 178



 Score = 31.6 bits (70), Expect(2) = 0.13
 Identities = 25/125 (20%), Positives = 56/125 (44%)
 Frame = +2

Query: 71  SKCGAFEKAQKVVEELFVQNVIFWNALIAGYARQKALGSFQ*CISPNSV*M*PSTSKMLI 250
           +KC   ++A+ + + + ++NVI   ++I+GYA   +  + +   +        +   ++ 
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTK------MAERNVVS 353

Query: 251 WTQKFTIVLLVEGC*EKMSCLALSWSTSMQSEGLFPDAITFARILKACGSTQDADMGTKT 430
           W       L+        +  ALS    ++ E + P   +FA ILKAC    +  +G + 
Sbjct: 354 WN-----ALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQA 408

Query: 431 QKYIV 445
             +++
Sbjct: 409 HVHVL 413



 Score = 22.7 bits (47), Expect(2) = 0.13
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 1   GTKIHNCIVGQRLLKKDVVLGTAF 72
           G ++H  +V    L+ D++L  AF
Sbjct: 272 GQEVHGRVVKNDKLRNDIILSNAF 295



 Score = 30.8 bits (68), Expect = 3.6
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 74  KCGAFEKAQKVVEELFVQNVIFWNALIAGYAR 169
           KCG  E+   V  ++  ++ + WNA+I G+A+
Sbjct: 439 KCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQ 470


>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein
           At3g09040, mitochondrial OS=Arabidopsis thaliana
           GN=PCMP-E88 PE=2 SV=1
          Length = 1028

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 33/133 (24%), Positives = 47/133 (35%)
 Frame = +2

Query: 71  SKCGAFEKAQKVVEELFVQNVIFWNALIAGYARQKALGSFQ*CISPNSV*M*PSTSKMLI 250
           SKC   E A KV E L  +N +FWNA+I GYA                            
Sbjct: 373 SKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE------------------------ 408

Query: 251 WTQKFTIVLLVEGC*EKMSCLALSWSTSMQSEGLFPDAITFARILKACGSTQDADMGTKT 430
                             S   +     M+S G   D  TF  +L  C ++ D +MG++ 
Sbjct: 409 ------------------SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQF 450

Query: 431 QKYIVSWRLLKKM 469
              I+  +L K +
Sbjct: 451 HSIIIKKKLAKNL 463



 Score = 36.2 bits (82), Expect = 0.086
 Identities = 31/119 (26%), Positives = 46/119 (38%)
 Frame = +2

Query: 71  SKCGAFEKAQKVVEELFVQNVIFWNALIAGYARQKALGSFQ*CISPNSV*M*PSTSKMLI 250
           SKCG  + A+KV   L   +V+  NALIAGY++                           
Sbjct: 575 SKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL------------------------ 610

Query: 251 WTQKFTIVLLVEGC*EKMSCLALSWSTSMQSEGLFPDAITFARILKACGSTQDADMGTK 427
              +  +VL  E                M + G+ P  ITFA I++AC   +   +GT+
Sbjct: 611 ---EEAVVLFQE----------------MLTRGVNPSEITFATIVEACHKPESLTLGTQ 650



 Score = 32.7 bits (73), Expect = 0.95
 Identities = 15/38 (39%), Positives = 26/38 (68%)
 Frame = +1

Query: 241 DADMDTKIHNCIVSRRLLRKDVVLGTVLVDKYAKRGSL 354
           D +M ++ H+ I+ ++L  K++ +G  LVD YAK G+L
Sbjct: 443 DLEMGSQFHSIIIKKKLA-KNLFVGNALVDMYAKCGAL 479



 Score = 32.0 bits (71), Expect = 1.6
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = +2

Query: 71  SKCGAFEKAQKVVEELFVQNVIFWNALIAGYARQK 175
           +KCGA E A+++ E +  ++ + WN +I  Y + +
Sbjct: 474 AKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDE 508



 Score = 31.2 bits (69), Expect = 2.8
 Identities = 14/34 (41%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
 Frame = +2

Query: 71  SKCGAFEKAQKVVEELFVQ-NVIFWNALIAGYAR 169
           +KCG  + + +V +E+  + NV+ WN+LI GYA+
Sbjct: 778 AKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAK 811


>sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protein
           At2g20540 OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1
          Length = 534

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
 Frame = +2

Query: 95  AQKVVEELFVQNVIFWNALIAGYAR----QKALGSFQ*CISPNSV*M*PSTSKMLIWTQK 262
           A KV +E++ ++VI WN+L++GYAR    +KA G F   +             ++ WT  
Sbjct: 163 AHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLD----------KTIVSWTAM 212

Query: 263 FTIVLLVEGC*EKMSCLALSWSTSMQSEGLFPDAITFARILKACGSTQDADMGTKTQKYI 442
            +    + GC  +    A+ +   MQ  G+ PD I+   +L +C      ++G     Y 
Sbjct: 213 ISGYTGI-GCYVE----AMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYA 267

Query: 443 VSWRLLKK 466
                LK+
Sbjct: 268 ERRGFLKQ 275



 Score = 30.4 bits (67), Expect = 4.7
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +2

Query: 71  SKCGAFEKAQKVVEELFVQNVIFWNALIAGYA 166
           SKCG   +A ++  ++  ++VI W+ +I+GYA
Sbjct: 287 SKCGVISQAIQLFGQMEGKDVISWSTMISGYA 318


>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein
           At2g22410, mitochondrial OS=Arabidopsis thaliana
           GN=PCMP-E28 PE=2 SV=1
          Length = 681

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 31/129 (24%), Positives = 52/129 (40%)
 Frame = +2

Query: 71  SKCGAFEKAQKVVEELFVQNVIFWNALIAGYARQKALGSFQ*CISPNSV*M*PSTSKMLI 250
           SKCG   +A+++ + L  + ++ W  +I+GYAR   L   +                +++
Sbjct: 303 SKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDD------MEEKDVVL 356

Query: 251 WTQKFTIVLLVEGC*EKMSCLALSWSTSMQSEGLFPDAITFARILKACGSTQDADMGTKT 430
           W       ++      K    AL+    MQ+    PD IT    L AC      D+G   
Sbjct: 357 WN-----AMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWI 411

Query: 431 QKYIVSWRL 457
            +YI  + L
Sbjct: 412 HRYIEKYSL 420



 Score = 39.3 bits (90), Expect = 0.010
 Identities = 32/139 (23%), Positives = 55/139 (39%)
 Frame = +2

Query: 71  SKCGAFEKAQKVVEELFVQNVIFWNALIAGYARQKALGSFQ*CISPNSV*M*PSTSKMLI 250
           + CG  E A+KV +E  V++++ WN LI GY   K +G                 ++  I
Sbjct: 202 ASCGDMENARKVFDESPVRDLVSWNCLINGY---KKIGE----------------AEKAI 242

Query: 251 WTQKFTIVLLVEGC*EKMSCLALSWSTSMQSEGLFPDAITFARILKACGSTQDADMGTKT 430
           +  K                        M+SEG+ PD +T   ++ +C    D + G + 
Sbjct: 243 YVYKL-----------------------MESEGVKPDDVTMIGLVSSCSMLGDLNRGKEF 279

Query: 431 QKYIVSWRLLKKMPCLAVL 487
            +Y+    L   +P +  L
Sbjct: 280 YEYVKENGLRMTIPLVNAL 298


>sp|Q0WNP3|PP319_ARATH Pentatricopeptide repeat-containing protein
           At4g18520 OS=Arabidopsis thaliana GN=PCMP-A2 PE=2 SV=1
          Length = 617

 Score = 35.4 bits (80), Expect(2) = 0.001
 Identities = 15/35 (42%), Positives = 26/35 (74%)
 Frame = +1

Query: 259 KIHNCIVSRRLLRKDVVLGTVLVDKYAKRGSLSRC 363
           ++H+ +V +R+++ DV +GT L+D YAK G +S C
Sbjct: 305 QVHSLVV-KRMIKTDVFVGTSLMDMYAKCGEISDC 338



 Score = 26.2 bits (56), Expect(2) = 0.001
 Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
 Frame = +2

Query: 71  SKCGAFEKAQKVVEELFVQNVIFWNALIAGYARQ----KALGSF 190
           ++CG    A +  + +  ++VI W A+I+  +R+    KA+G F
Sbjct: 229 AQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMF 272



 Score = 33.1 bits (74), Expect = 0.73
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = +2

Query: 71  SKCGAFEKAQKVVEELFVQNVIFWNALIAGYAR 169
           +KCG   +A +V + +  +N++ W A+I GYAR
Sbjct: 532 AKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYAR 564



 Score = 30.8 bits (68), Expect = 3.6
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +2

Query: 71  SKCGAFEKAQKVVEELFVQNVIFWNALIAGYARQ 172
           +KCG     +KV + +  +N + W ++IA +AR+
Sbjct: 330 AKCGEISDCRKVFDGMSNRNTVTWTSIIAAHARE 363


>sp|Q9M9R6|PPR43_ARATH Pentatricopeptide repeat-containing protein
           At1g14470 OS=Arabidopsis thaliana GN=PCMP-A4 PE=2 SV=2
          Length = 540

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 2/137 (1%)
 Frame = +2

Query: 38  C*KKMLCLVLPSKCGAFEKAQKVVEELFVQ-NVIFWNALIAGYARQKALGSFQ*CISPNS 214
           C  K   L + +KC   + A+++  EL  Q N++ WNA+I+GY R   + S +       
Sbjct: 299 CFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDT-- 356

Query: 215 V*M*PSTSKMLIWTQKFTIVLLVEGC*EKMSCLALSWSTSMQSEG-LFPDAITFARILKA 391
                    ++ W       L+        + LA+ +   M   G   PD +T   +L A
Sbjct: 357 ----MPKRNVVSWNS-----LIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSA 407

Query: 392 CGSTQDADMGTKTQKYI 442
           CG   D ++G     YI
Sbjct: 408 CGHMADLELGDCIVDYI 424
tr_hit_id A7QGW1
Definition tr|A7QGW1|A7QGW1_VITVI Chromosome chr16 scaffold_94, whole genome shotgun sequence OS=Vitis vinifera
Align length 128
Score (bit) 49.3
E-value 0.0001
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943757|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_N13, 5'
         (496 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7QGW1|A7QGW1_VITVI Chromosome chr16 scaffold_94, whole genom...    49   1e-04
tr|A7PGD4|A7PGD4_VITVI Chromosome chr6 scaffold_15, whole genome...    48   2e-04
tr|A7P1S8|A7P1S8_VITVI Chromosome chr19 scaffold_4, whole genome...    48   3e-04
tr|Q94I34|Q94I34_ORYSJ Putative selenium-binding protein-like (P...    47   5e-04
tr|A7PXP2|A7PXP2_VITVI Chromosome chr12 scaffold_36, whole genom...    41   5e-04
tr|A7PML6|A7PML6_VITVI Chromosome chr14 scaffold_21, whole genom...    36   7e-04
tr|B8LKN6|B8LKN6_PICSI Putative uncharacterized protein OS=Picea...    46   9e-04
tr|A7QI70|A7QI70_VITVI Chromosome chr17 scaffold_101, whole geno...    45   0.001
tr|A5C8U0|A5C8U0_VITVI Putative uncharacterized protein OS=Vitis...    45   0.001
tr|Q7XX33|Q7XX33_ORYSJ OSJNBa0060B20.9 protein OS=Oryza sativa s...    45   0.002
tr|Q1KUN7|Q1KUN7_9ROSI Putative uncharacterized protein OS=Cleom...    45   0.002
tr|Q0JER4|Q0JER4_ORYSJ Os04g0218100 protein (Fragment) OS=Oryza ...    45   0.002
tr|A7NV79|A7NV79_VITVI Chromosome chr18 scaffold_1, whole genome...    45   0.002
tr|A5BGP4|A5BGP4_VITVI Putative uncharacterized protein OS=Vitis...    45   0.002
tr|A2WZV4|A2WZV4_ORYSI Putative uncharacterized protein OS=Oryza...    45   0.002
tr|Q5W965|Q5W965_PHYPA PPR868-14 OS=Physcomitrella patens PE=2 SV=1    44   0.003
tr|A9SDQ1|A9SDQ1_PHYPA Predicted protein OS=Physcomitrella paten...    44   0.003
tr|A7PZB8|A7PZB8_VITVI Chromosome chr15 scaffold_40, whole genom...    44   0.003
tr|Q6YUT6|Q6YUT6_ORYSJ Putative pentatricopeptide (PPR) repeat-c...    44   0.004
tr|Q6ETD1|Q6ETD1_ORYSJ Os02g0106300 protein OS=Oryza sativa subs...    44   0.004
tr|Q0E369|Q0E369_ORYSJ Os02g0191200 protein OS=Oryza sativa subs...    44   0.004
tr|A7PAH3|A7PAH3_VITVI Chromosome chr14 scaffold_9, whole genome...    44   0.004
tr|A5B3U0|A5B3U0_VITVI Putative uncharacterized protein OS=Vitis...    44   0.004
tr|A3A409|A3A409_ORYSJ Putative uncharacterized protein OS=Oryza...    44   0.004
tr|A7NXR2|A7NXR2_VITVI Chromosome chr5 scaffold_2, whole genome ...    39   0.006
tr|A7PX41|A7PX41_VITVI Chromosome chr12 scaffold_36, whole genom...    34   0.006
tr|A7QGY9|A7QGY9_VITVI Chromosome chr3 scaffold_95, whole genome...    34   0.007
tr|A7QPF6|A7QPF6_VITVI Chromosome chr18 scaffold_137, whole geno...    43   0.007
tr|A7P600|A7P600_VITVI Chromosome chr4 scaffold_6, whole genome ...    43   0.007
tr|A7Q044|A7Q044_VITVI Chromosome chr8 scaffold_41, whole genome...    35   0.007

>tr|A7QGW1|A7QGW1_VITVI Chromosome chr16 scaffold_94, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00038512001
           PE=4 SV=1
          Length = 519

 Score = 49.3 bits (116), Expect = 1e-04
 Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
 Frame = +2

Query: 71  SKCGAFEKAQKVVEELFVQNVIFWNALIAGYAR----QKALGSFQ*CISPNSV*M*PSTS 238
           S CG    A+ + +E+  ++V+ WNALI GY R      ALG F+     N +       
Sbjct: 143 SACGFLSTARILFDEMSNRDVVSWNALITGYLRSGEIDSALGLFRKMEERNVI------- 195

Query: 239 KMLIWTQKFTIVLLVEGC*EKMSCLALSWSTSMQSEGLFPDAITFARILKACGSTQDADM 418
                T   TI  LV+G   K +         M ++ + PD IT A +L AC S    D 
Sbjct: 196 -----TWNSTITGLVQGGRPKEAVEYFFEMQVMSNDTVRPDKITIASVLSACASLGAIDH 250

Query: 419 GTKTQKYI 442
           G     Y+
Sbjct: 251 GKWVHSYL 258


>tr|A7PGD4|A7PGD4_VITVI Chromosome chr6 scaffold_15, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00017500001
           PE=4 SV=1
          Length = 518

 Score = 48.1 bits (113), Expect = 2e-04
 Identities = 33/125 (26%), Positives = 54/125 (43%)
 Frame = +2

Query: 71  SKCGAFEKAQKVVEELFVQNVIFWNALIAGYARQKALGSFQ*CISPNSV*M*PSTSKMLI 250
           SKCG  + A  + +E+ V+N + WN +I G  R   +G               S    + 
Sbjct: 138 SKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNGEVGEAIVLFDQ------MSERDAIS 191

Query: 251 WTQKFTIVLLVEGC*EKMSCLALSWSTSMQSEGLFPDAITFARILKACGSTQDADMGTKT 430
           WT       + +GC E+    AL W   MQ  G+ PD +T   +L AC +     +G   
Sbjct: 192 WTSMIG-GFVKKGCFEQ----ALEWFREMQLAGVEPDYVTIISVLAACANLGALGLGLWI 246

Query: 431 QKYIV 445
            ++++
Sbjct: 247 NRFVM 251


>tr|A7P1S8|A7P1S8_VITVI Chromosome chr19 scaffold_4, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00027739001
           PE=4 SV=1
          Length = 581

 Score = 47.8 bits (112), Expect = 3e-04
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
 Frame = +2

Query: 71  SKCGAFEKAQKVVEELFVQNVIFWNALIAGYARQKALGSFQ*CIS--PNSV*M*PSTSKM 244
           ++ G    A+++ +E+ V+N   WNA+I GY+R + + S +   S  PN          +
Sbjct: 204 ARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRLRNVESAELLFSQMPNR--------DI 255

Query: 245 LIWTQKFTIVLLVEGC*EKMSCLALSWSTSMQSEGLFPDAITFARILKACGSTQDADMGT 424
           + WT   T++        K    AL+    MQ+ G+ PD +T A I+ AC      D+G 
Sbjct: 256 ISWT---TMIACYSQ--NKQFREALAVFNEMQTNGIDPDEVTMATIISACAHLGALDLGK 310

Query: 425 KTQKY 439
           +   Y
Sbjct: 311 EIHLY 315


>tr|Q94I34|Q94I34_ORYSJ Putative selenium-binding protein-like
           (Putative uncharacterized protein) (Pentatricopeptide,
           putative) OS=Oryza sativa subsp. japonica
           GN=OSJNBa0050N08.17 PE=4 SV=1
          Length = 651

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 34/129 (26%), Positives = 52/129 (40%)
 Frame = +2

Query: 74  KCGAFEKAQKVVEELFVQNVIFWNALIAGYARQKALGSFQ*CISPNSV*M*PSTSKMLIW 253
           KCG+ E A+ V E +  + V+ W  +I G+A+   +   +                +  W
Sbjct: 275 KCGSLEMAKSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMP------ERDVFPW 328

Query: 254 TQKFTIVLLVEGC*EKMSCLALSWSTSMQSEGLFPDAITFARILKACGSTQDADMGTKTQ 433
               T  +  + C E     ALS    MQ   + PD IT   +L AC      +MG    
Sbjct: 329 NALMTGYVQCKQCKE-----ALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVH 383

Query: 434 KYIVSWRLL 460
           +YI   RL+
Sbjct: 384 RYIEKHRLV 392


>tr|A7PXP2|A7PXP2_VITVI Chromosome chr12 scaffold_36, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00026118001
           PE=4 SV=1
          Length = 815

 Score = 41.2 bits (95), Expect(2) = 5e-04
 Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
 Frame = +2

Query: 71  SKCGAFEKAQKVVEELFVQNVIFWNALIAGYAR----QKALGSFQ*CISPN 211
           +KCG    A+   +++ + NV+ WNA+I+GYA+     +A+G FQ  IS N
Sbjct: 389 AKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKN 439



 Score = 25.0 bits (53), Expect(2) = 5e-04
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +1

Query: 277 VSRRLLRKDVVLGTVLVDKYAKRGSL 354
           +++   R DV + T L+D +AK GS+
Sbjct: 470 INKTEYRNDVFVNTALIDMFAKCGSV 495



 Score = 34.3 bits (77), Expect = 3.4
 Identities = 14/37 (37%), Positives = 25/37 (67%)
 Frame = +2

Query: 59  LVLPSKCGAFEKAQKVVEELFVQNVIFWNALIAGYAR 169
           + L +KCG  E+A+ V E L  +N++ W ++I+GY +
Sbjct: 284 VALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQ 320


>tr|A7PML6|A7PML6_VITVI Chromosome chr14 scaffold_21, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020867001
           PE=4 SV=1
          Length = 1283

 Score = 35.8 bits (81), Expect(2) = 7e-04
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +1

Query: 262 IHNCIVSRRLLRKDVVLGTVLVDKYAKRGSLSR 360
           IH  +  R+ L  DV +GT LVD YAK G + R
Sbjct: 229 IHEYVTKRKWLEADVFIGTALVDMYAKCGCIDR 261



 Score = 30.0 bits (66), Expect(2) = 7e-04
 Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
 Frame = +2

Query: 71  SKCGAFEKAQKVVEELFVQNVIFWNALIAGYARQ----KALGSFQ 193
           ++C A   A+K+ +E+   +V+ WN L+ GY R+    +AL +F+
Sbjct: 152 AECCAMGDARKLFDEIPNLDVVQWNVLLNGYVRRGLAPEALNAFR 196



 Score = 32.7 bits (73), Expect(2) = 1.5
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +2

Query: 71  SKCGAFEKAQKVVEELFVQNVIFWNALIAGYA 166
           +KCG  +++ +V E +  +NV  W+A+I G+A
Sbjct: 254 AKCGCIDRSVEVFEGMTKRNVFSWSAMIGGFA 285



 Score = 21.6 bits (44), Expect(2) = 1.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 1   GTKIHNCIVGQRLLKKDVVLGTA 69
           G  IH  +  ++ L+ DV +GTA
Sbjct: 226 GKWIHEYVTKRKWLEADVFIGTA 248


>tr|B8LKN6|B8LKN6_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 394

 Score = 46.2 bits (108), Expect = 9e-04
 Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 4/123 (3%)
 Frame = +2

Query: 71  SKCGAFEKAQKVVEELFVQNVIFWNALIAGYARQKALGSFQ*CISPNSV*M*PSTSKMLI 250
           +KCG+   AQKV +++  ++V+ WN  IAGYA+    G F  C+            KM  
Sbjct: 260 AKCGSIGSAQKVFDKMLQRDVVSWNVAIAGYAQN---GRFDECME--------LFRKMQC 308

Query: 251 WTQKFTIV----LLVEGC*EKMSCLALSWSTSMQSEGLFPDAITFARILKACGSTQDADM 418
              K  ++    L+            L     MQ  G+ P++IT A +L AC +      
Sbjct: 309 AGLKIDVITWNTLITAYAQNGYGDQTLELFQQMQLRGVKPNSITIASVLSACAAVSALQE 368

Query: 419 GTK 427
           G +
Sbjct: 369 GKR 371



 Score = 38.9 bits (89), Expect = 0.14
 Identities = 28/124 (22%), Positives = 48/124 (38%)
 Frame = +2

Query: 74  KCGAFEKAQKVVEELFVQNVIFWNALIAGYARQKALGSFQ*CISPNSV*M*PSTSKMLIW 253
           KCG+ E A++V +++  +N++ W A+++GYA+    G F                     
Sbjct: 160 KCGSIEDARRVFDKMCERNLVSWTAMVSGYAQ----GGF--------------------- 194

Query: 254 TQKFTIVLLVEGC*EKMSCLALSWSTSMQSEGLFPDAITFARILKACGSTQDADMGTKTQ 433
                            +  AL     MQ E +  + +T A +L AC    D   G +  
Sbjct: 195 -----------------ADEALRMFYEMQGEDVKANYVTVASVLPACAQLSDLQQGKEIH 237

Query: 434 KYIV 445
            YI+
Sbjct: 238 GYII 241


>tr|A7QI70|A7QI70_VITVI Chromosome chr17 scaffold_101, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00000117001
           PE=4 SV=1
          Length = 592

 Score = 45.4 bits (106), Expect = 0.001
 Identities = 33/141 (23%), Positives = 57/141 (40%)
 Frame = +2

Query: 59  LVLPSKCGAFEKAQKVVEELFVQNVIFWNALIAGYARQKALGSFQ*CISPNSV*M*PSTS 238
           +V+ SKCG+   A +V + + ++NV+ W +LI GY+             PN         
Sbjct: 285 IVVYSKCGSIRDAVQVFQLMPMRNVVSWTSLINGYSDNNC---------PNE-------- 327

Query: 239 KMLIWTQKFTIVLLVEGC*EKMSCLALSWSTSMQSEGLFPDAITFARILKACGSTQDADM 418
                                    AL +   M++E + PD IT   ++  C   +  ++
Sbjct: 328 -------------------------ALGFFKQMEAENIRPDEITVLGVVCMCSKLRSFEL 362

Query: 419 GTKTQKYIVSWRLLKKMPCLA 481
           G    +Y+V   LLK+ P +A
Sbjct: 363 GEWISQYVVKIGLLKESPAIA 383


>tr|A5C8U0|A5C8U0_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_018821 PE=4 SV=1
          Length = 871

 Score = 45.4 bits (106), Expect = 0.001
 Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 5/134 (3%)
 Frame = +2

Query: 71  SKCGAFEKAQKVVEELFVQNVIFWNALIAGYAR----QKALGSFQ*CISPNSV*M*PSTS 238
           +KCG  E+A KV E + V++V+ WNA++ GY++      ALG F+               
Sbjct: 296 AKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFE------------KIR 343

Query: 239 KMLIWTQKFTIVLLVEGC*EK-MSCLALSWSTSMQSEGLFPDAITFARILKACGSTQDAD 415
           +  I     T   ++ G  ++ +   AL     M   G  P+ +T   +L  C S     
Sbjct: 344 EEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLL 403

Query: 416 MGTKTQKYIVSWRL 457
            G +T  + + W L
Sbjct: 404 HGKETHCHAIKWIL 417


>tr|Q7XX33|Q7XX33_ORYSJ OSJNBa0060B20.9 protein OS=Oryza sativa
           subsp. japonica GN=OSJNBa0060B20.9 PE=4 SV=1
          Length = 897

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
 Frame = +2

Query: 71  SKCGAFEKAQKVVEELFVQNVIFWNALIAGYARQKALGSFQ*CISPNSV*M*PSTSKMLI 250
           +KCG  E A KV   +  ++V+ WNA++AGY++    G+F+         +  +  K  I
Sbjct: 318 AKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQS---GNFEAAFE-----LFKNMRKENI 369

Query: 251 WTQKFTIVLLVEGC*EK-MSCLALSWSTSMQSEGLFPDAITFARILKACGSTQDADMGTK 427
                T   ++ G  ++  S  AL+    M   G  P+ +T   +L AC S      GT+
Sbjct: 370 PLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTE 429

Query: 428 TQKY 439
              Y
Sbjct: 430 IHAY 433