DK943762
Clone id YMU02A01NGRL0003_N20
Library
Length 151
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_N20. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GTGGAATTATTACGCAATTGGGTTACTTGAAAAGCCTAGAACCAGTTTGTGCTATAGATG
ACTACTGCTCTTGTGATTAATGGCTTGTATGATTTCAATGGCAATTGAAGGGCTGTAAAA
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q8CG65
Definition sp|Q8CG65|SSPO_MOUSE SCO-spondin OS=Mus musculus
Align length 24
Score (bit) 29.6
E-value 4.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943762|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_N20, 5'
(116 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8CG65|SSPO_MOUSE SCO-spondin OS=Mus musculus GN=Sspo PE=2 SV=1 30 4.9

>sp|Q8CG65|SSPO_MOUSE SCO-spondin OS=Mus musculus GN=Sspo PE=2 SV=1
Length = 4998

Score = 29.6 bits (65), Expect = 4.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3

Query: 3 GIITQLGYLKSLEPVCAIDDYCSC 74
G + QLGY +S +C +D+C C
Sbjct: 4814 GCVCQLGYFRSQTGLCVPEDHCEC 4837


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943762|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_N20, 5'
(116 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******