DK943764 [AcEST]

DK943764
Clone id	YMU02A01NGRL0003_N22
Library	YMU02
Length	361
Definition	Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_N22. 5' end sequence.
Accession	DK943764
Tissue type	young leaves
Developmental stage	sporophyte
Contig ID	CL21Contig1
Sequence	CTGCAAGGTCTGATTAATGTGGAGAATGGATTCGTACAAATGCTGTATGTGTTGTGTGTC ACTACGGGTGAGGCATCCGAGGCTTGTGTTCAAGCCCTTGTTGTTCAGCAAGTTGTTATG GTAGATAGTACTTTAGTTCACTTAGAACTCTTTGTCTGATTGCCTTTGGTTATTGGCAGT GCTGGTAGACCATTTAACGGAACCATTCATTCTCACTCCAGCAGAACCTGAGCAACCTGG GAACATGGAAACTGGAATTGTAATGCTTACAACAGAAAATATAAATAAGCTTTTTGAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAATTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA A
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q3LHN2
Definition	sp\|Q3LHN2\|KR192_HUMAN Keratin-associated protein 19-2 OS=Homo sapiens
Align length	42
Score (bit)	32.7
E-value	0.59
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK943764\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0003_N22, 5' (296 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q3LHN2\|KR192_HUMAN Keratin-associated protein 19-2 OS=Homo sa... 33 0.59 sp\|Q9GLM3\|RPGR1_BOVIN X-linked retinitis pigmentosa GTPase regul... 29 8.5 >sp\|Q3LHN2\|KR192_HUMAN Keratin-associated protein 19-2 OS=Homo sapiens GN=KRTAP19-2 PE=2 SV=1 Length = 52 Score = 32.7 bits (73), Expect = 0.59 Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 2/42 (4%) Frame = +3 Query: 18 CGEWIRTNAVCVV--CHYGGIRGLCSSPCCSASCYGRYFS 137 CG + R C C YG G RG C CC SCY R F+ Sbjct: 9 CGSFCRLGYGCGYEGCRYGCGHRG-CGDGCCCPSCYRRYRFT 49 >sp\|Q9GLM3\|RPGR1_BOVIN X-linked retinitis pigmentosa GTPase regulator-interacting protein 1 OS=Bos taurus GN=RPGRIP1 PE=1 SV=1 Length = 1221 Score = 28.9 bits (63), Expect = 8.5 Identities = 23/60 (38%), Positives = 31/60 (51%) Frame = -3 Query: 189 STSTANNQRQSDKEFVNSTIYHNNLLNNKGLNTSLGCLTRSDTQHIQHLYESILHINQ 10 ST A R S KE N I LL+ + NTSL +T++ +Q YE++LH NQ Sbjct: 211 STQKATELRASIKE---NIQLIRLKKLLHER--NTSLA-VTKAQLTEVQAAYETLLHKNQ 264
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	Q8IEQ0
Definition	tr\|Q8IEQ0\|Q8IEQ0_PLAF7 Putative uncharacterized protein MAL13P1.32 OS=Plasmodium falciparum (isolate 3D7)
Align length	35
Score (bit)	34.3
E-value	3.2
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK943764\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0003_N22, 5' (296 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|Q8IEQ0\|Q8IEQ0_PLAF7 Putative uncharacterized protein MAL13P1.... 34 3.2 >tr\|Q8IEQ0\|Q8IEQ0_PLAF7 Putative uncharacterized protein MAL13P1.32 OS=Plasmodium falciparum (isolate 3D7) GN=MAL13P1.32 PE=4 SV=1 Length = 4273 Score = 34.3 bits (77), Expect = 3.2 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = -3 Query: 129 TIYHNNLLNNKGLNTSLGCLTRSDTQHIQHLYESI 25 T+ H+N LNN LN +L C T++ H ++Y I Sbjct: 3102 TLLHDNHLNNNKLNKNLFCFTKNMNHHFSNIYNII 3136