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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK943772
Clone id YMU02A01NGRL0003_O07
Library
Length 567
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_O07. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GAAGCAGTGGTATCAACGCAGAGTGGCCATTACGGCCGGAAAGCAGTGGTATCAACGCAG
AGTGGCCATTACGGCCGGGGATTTCGCATGCGTTTGTCATTTATAAACCCGTTCACCTTC
CTGCTACAGACGGTCAGGAATCGCGATCGCCGTGCTCTAGTGAACTAGCATTCGGAACAC
AGGCCTTGGTGACCTATTTGAACATATCGCTAGAGAATTTTTGGCAAGGCAAACTGGAGC
GTCTAGCTGTTTGGGTGGGGGGCAGCCTTGCCTCTGCATTTTTTGCATCTCTGGAACGGT
GCTCATGCATCAATCTTGAAACAACTGATGCTGATGAAGATGAGGAAGCAGATGGGAAAC
CGTTAATTCCCATGAGCAGGGAGCCTGTACAGCAAGAAAAGTGGGTGCCTGAAATGGTCA
TCCAGATTGATCAAGCCAATGTGGAGCCTTCTCCTTCAAAGTAGCAGCAGGCTTCAAGCT
TGCTTCAATGCACGGACTGAGGGGGCCCTGAAGAAGTGTCAAAGCAGTCGCTTCAACAGA
AAGGCAGTTGCTAGTCTTTCTGCATAG
■■Homology search results ■■ -
sp_hit_id Q66HA2
Definition sp|Q66HA2|CR3L1_RAT cAMP-responsive element-binding protein 3-like protein 1 OS=Rattus norvegicus
Align length 36
Score (bit) 30.8
E-value 3.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943772|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_O07, 5'
         (488 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q66HA2|CR3L1_RAT cAMP-responsive element-binding protein 3-li...    31   3.4  
sp|Q9H6K5|YS027_HUMAN Putative uncharacterized protein FLJ22184 ...    30   7.6  
sp|Q9Z125|CR3L1_MOUSE cAMP-responsive element-binding protein 3-...    30   7.6  

>sp|Q66HA2|CR3L1_RAT cAMP-responsive element-binding protein 3-like
           protein 1 OS=Rattus norvegicus GN=Creb3l1 PE=2 SV=1
          Length = 520

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -1

Query: 479 KTSNCLSVEATALTLLQGPLSPCIEASLKPAATLKE 372
           +T  CL V A    L+ G L+PC+ A    + T+KE
Sbjct: 370 QTGTCLMVAALCFVLVLGSLAPCLPAFSSGSKTVKE 405


>sp|Q9H6K5|YS027_HUMAN Putative uncharacterized protein FLJ22184
           OS=Homo sapiens PE=2 SV=1
          Length = 616

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 24/58 (41%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
 Frame = -1

Query: 452 ATALTLLQGPLSPCIEASLKPAATLKEKAP-----HWLDQSG*PFQAPTFLAVQAPCS 294
           A AL  LQ P SP     L P AT   +AP     H L     PF  P    VQAP S
Sbjct: 116 ALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQA---PFSPPPSPPVQAPFS 170


>sp|Q9Z125|CR3L1_MOUSE cAMP-responsive element-binding protein
           3-like protein 1 OS=Mus musculus GN=Creb3l1 PE=2 SV=2
          Length = 519

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -1

Query: 479 KTSNCLSVEATALTLLQGPLSPCIEASLKPAATLKE 372
           +T  CL V A    L+ G L PC+ A    + T+KE
Sbjct: 371 QTGTCLMVAALCFVLVLGSLVPCLPAFSSGSMTVKE 406
tr_hit_id A7QWG1
Definition tr|A7QWG1|A7QWG1_VITVI Chromosome undetermined scaffold_203, whole genome shotgun sequence OS=Vitis vinifera
Align length 29
Score (bit) 51.6
E-value 2.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943772|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_O07, 5'
         (488 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7QWG1|A7QWG1_VITVI Chromosome undetermined scaffold_203, who...    52   2e-05
tr|A9NT62|A9NT62_PICSI Putative uncharacterized protein OS=Picea...    51   3e-05
tr|Q9FRG1|Q9FRG1_ORYSJ Expressed protein (Putative uncharacteriz...    50   7e-05
tr|A2XKK7|A2XKK7_ORYSI Putative uncharacterized protein OS=Oryza...    50   7e-05
tr|Q8LNF1|Q8LNF1_ORYSJ Os10g0502100 protein OS=Oryza sativa subs...    47   5e-04
tr|Q6K7R6|Q6K7R6_ORYSJ Os02g0826400 protein OS=Oryza sativa subs...    47   5e-04
tr|B8AF59|B8AF59_ORYSI Putative uncharacterized protein OS=Oryza...    47   5e-04
tr|B6TBS6|B6TBS6_MAIZE Putative uncharacterized protein OS=Zea m...    47   5e-04
tr|B4FGZ8|B4FGZ8_MAIZE Putative uncharacterized protein OS=Zea m...    47   5e-04
tr|A3ACW8|A3ACW8_ORYSJ Putative uncharacterized protein OS=Oryza...    47   5e-04
tr|A2Z926|A2Z926_ORYSI Putative uncharacterized protein OS=Oryza...    47   5e-04
tr|B6T6C1|B6T6C1_MAIZE Putative uncharacterized protein OS=Zea m...    46   0.001
tr|A7QSS2|A7QSS2_VITVI Chromosome chr4 scaffold_162, whole genom...    45   0.001
tr|Q9SN67|Q9SN67_ARATH Putative uncharacterized protein F25I24.2...    45   0.002
tr|A9PCJ9|A9PCJ9_POPTR Putative uncharacterized protein OS=Popul...    44   0.004
tr|A5ANY9|A5ANY9_VITVI Putative uncharacterized protein OS=Vitis...    43   0.007
tr|A9PE30|A9PE30_POPTR Putative uncharacterized protein OS=Popul...    42   0.020
tr|Q0WQ09|Q0WQ09_ARATH Putative uncharacterized protein OS=Arabi...    41   0.026
tr|B6TFH9|B6TFH9_MAIZE Putative uncharacterized protein OS=Zea m...    37   0.38 
tr|A9PCD8|A9PCD8_POPTR Putative uncharacterized protein OS=Popul...    37   0.38 
tr|Q1QW87|Q1QW87_CHRSD Molybdopterin binding protein OS=Chromoha...    35   2.5  
tr|Q2QLP0|Q2QLP0_ORYSJ Os12g0634600 protein OS=Oryza sativa subs...    34   3.2  
tr|A2ZN35|A2ZN35_ORYSI Putative uncharacterized protein OS=Oryza...    34   3.2  

>tr|A7QWG1|A7QWG1_VITVI Chromosome undetermined scaffold_203, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00008640001 PE=4 SV=1
          Length = 147

 Score = 51.6 bits (122), Expect = 2e-05
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = +2

Query: 152 KLERLAVWVGGSLASAFFASLERCSCINL 238
           +L+R+A WVG S+ASAFFASLERCSCINL
Sbjct: 80  RLDRMANWVGTSVASAFFASLERCSCINL 108


>tr|A9NT62|A9NT62_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 122

 Score = 50.8 bits (120), Expect = 3e-05
 Identities = 25/46 (54%), Positives = 29/46 (63%)
 Frame = +2

Query: 152 KLERLAVWVGGSLASAFFASLERCSCINLXXXXXXXXXXXXGKPLI 289
           KL+R AVWVG S+ SAFFASLERCSCI L             +PL+
Sbjct: 40  KLDRAAVWVGTSVVSAFFASLERCSCITLSNTDTEDEEEAKDRPLM 85


>tr|Q9FRG1|Q9FRG1_ORYSJ Expressed protein (Putative uncharacterized
           protein) OS=Oryza sativa subsp. japonica GN=Os03g47210
           PE=4 SV=1
          Length = 124

 Score = 49.7 bits (117), Expect = 7e-05
 Identities = 20/28 (71%), Positives = 26/28 (92%)
 Frame = +2

Query: 155 LERLAVWVGGSLASAFFASLERCSCINL 238
           L+R+A WVGG +A+AFFASLERCSC+N+
Sbjct: 38  LDRVAGWVGGGIAAAFFASLERCSCVNV 65


>tr|A2XKK7|A2XKK7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_12986 PE=4 SV=1
          Length = 124

 Score = 49.7 bits (117), Expect = 7e-05
 Identities = 20/28 (71%), Positives = 26/28 (92%)
 Frame = +2

Query: 155 LERLAVWVGGSLASAFFASLERCSCINL 238
           L+R+A WVGG +A+AFFASLERCSC+N+
Sbjct: 38  LDRVAGWVGGGIAAAFFASLERCSCVNV 65


>tr|Q8LNF1|Q8LNF1_ORYSJ Os10g0502100 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0078O01.13 PE=4 SV=1
          Length = 89

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 20/29 (68%), Positives = 25/29 (86%)
 Frame = +2

Query: 152 KLERLAVWVGGSLASAFFASLERCSCINL 238
           KLE  A+WVG S+ASAFFAS+E CSCI++
Sbjct: 16  KLEGYAIWVGASVASAFFASMESCSCIHV 44


>tr|Q6K7R6|Q6K7R6_ORYSJ Os02g0826400 protein OS=Oryza sativa subsp.
           japonica GN=P0452F04.17 PE=4 SV=1
          Length = 82

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = +2

Query: 155 LERLAVWVGGSLASAFFASLERCSCINL 238
           +E  A WVG S+ SAFFASLERCSCINL
Sbjct: 1   MESWASWVGASVTSAFFASLERCSCINL 28


>tr|B8AF59|B8AF59_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_09527 PE=4 SV=1
          Length = 82

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = +2

Query: 155 LERLAVWVGGSLASAFFASLERCSCINL 238
           +E  A WVG S+ SAFFASLERCSCINL
Sbjct: 1   MESWASWVGASVTSAFFASLERCSCINL 28


>tr|B6TBS6|B6TBS6_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 92

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = +2

Query: 155 LERLAVWVGGSLASAFFASLERCSCINL 238
           +E  A WVG S+ SAFFASLERCSCINL
Sbjct: 1   MESWATWVGTSVTSAFFASLERCSCINL 28


>tr|B4FGZ8|B4FGZ8_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 83

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = +2

Query: 155 LERLAVWVGGSLASAFFASLERCSCINL 238
           +E  A WVG S+ SAFFASLERCSCINL
Sbjct: 1   MESWATWVGTSVTSAFFASLERCSCINL 28


>tr|A3ACW8|A3ACW8_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_008640 PE=4 SV=1
          Length = 119

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = +2

Query: 155 LERLAVWVGGSLASAFFASLERCSCINL 238
           +E  A WVG S+ SAFFASLERCSCINL
Sbjct: 1   MESWASWVGASVTSAFFASLERCSCINL 28