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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK943778
Clone id YMU02A01NGRL0003_O17
Library
Length 531
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_O17. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
TGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACTCTGTCCTA
CTTGCCGCCTTTGTCAAGTGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCCGAAAAGG
CTGGACCCCTTGCATTGAGTTCGACAAAATCGGGAGCGTGTACCGAGAGCACTTCCACGG
CAGCGGCTACTACGATGGGCGGTACTGGGTGATGTGGAAGCTGCCCATGTTTGGCTGCCA
AGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGCGCCAAGGAGTATCCTGAAGCCTT
CATCCGCGTGCTGGGCTTTGACGCTAAGAGGCAGGTGCAGGTCTCCGGCTTCCTTGTCCA
GAAGCCCTCTGTCTAAACTTTCTTAAGGCAAGCCAATTTAGTTGGCATGAATGCCTGCTT
CCCATTTCCCACTGGCGCCTAACAAGCTTGCTCTTATGAGCTTTTGTGTCCCAGCCACTT
TGCATACATAATGAAACAACTTCCCAGTGGTGGCTCCAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 123
Score (bit) 173.0
E-value 4.0e-43
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943778|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_O17, 5'
         (517 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   173   4e-43
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   172   6e-43
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   172   8e-43
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   170   4e-42
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   170   4e-42
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   170   4e-42
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   170   4e-42
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   170   4e-42
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   169   7e-42
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   169   9e-42
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   168   1e-41
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   167   2e-41
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   167   3e-41
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   167   4e-41
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   167   4e-41
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   167   4e-41
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   166   8e-41
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   166   8e-41
sp|P08474|RBS_CUCSA Ribulose bisphosphate carboxylase small chai...   166   8e-41
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   166   8e-41
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   166   8e-41
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   166   8e-41
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   165   1e-40
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   165   1e-40
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   165   1e-40
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   165   1e-40
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   165   1e-40
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   164   2e-40
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   164   3e-40
sp|O22573|RBS3_FRIAG Ribulose bisphosphate carboxylase small cha...   162   7e-40

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  173 bits (439), Expect = 4e-43
 Identities = 76/123 (61%), Positives = 93/123 (75%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   VSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFH 178
           V  M VW P   KK+ETLSYLPPLS E ++K++D+++R  W PC+EF+ + G VYREH H
Sbjct: 55  VQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHH 114

Query: 179 GSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 358
             GYYDGRYW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD  RQVQ   F+V
Sbjct: 115 SPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIV 174

Query: 359 QKP 367
            KP
Sbjct: 175 AKP 177


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  172 bits (437), Expect = 6e-43
 Identities = 78/123 (63%), Positives = 94/123 (76%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   VSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFH 178
           V  M VW P   KKFETLSYLPPLSSEQ+AK+VD+++RK   PC+EF+ + G VYREH  
Sbjct: 57  VQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNR 116

Query: 179 GSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 358
             GYYDGRYW MWKLPMFGC D++ VL+E+ EC K YP AFIR++GFD KRQVQ+  F+ 
Sbjct: 117 SPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQIISFIA 176

Query: 359 QKP 367
            KP
Sbjct: 177 YKP 179


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  172 bits (436), Expect = 8e-43
 Identities = 74/122 (60%), Positives = 92/122 (75%)
 Frame = +2

Query: 2   VSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG 181
           V  M VW P   KKFETLSYLPPL+ EQ+ ++VD+++R GW PCIEF K+G VYRE+ + 
Sbjct: 54  VRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHNS 113

Query: 182 SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQ 361
            GYYDGRYW MWKLPMFGC D++ VL+E+ EC+K YP+ F R++GFD  RQVQ   FL  
Sbjct: 114 PGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCISFLTY 173

Query: 362 KP 367
           KP
Sbjct: 174 KP 175


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  170 bits (430), Expect = 4e-42
 Identities = 76/123 (61%), Positives = 90/123 (73%)
 Frame = +2

Query: 2   VSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG 181
           VS M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYRE+   
Sbjct: 55  VSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHAS 114

Query: 182 SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQ 361
            GYYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ   F+  
Sbjct: 115 PGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAY 174

Query: 362 KPS 370
           KP+
Sbjct: 175 KPT 177


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  170 bits (430), Expect = 4e-42
 Identities = 76/123 (61%), Positives = 90/123 (73%)
 Frame = +2

Query: 2   VSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG 181
           VS M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYRE+   
Sbjct: 55  VSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHAS 114

Query: 182 SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQ 361
            GYYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ   F+  
Sbjct: 115 PGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAY 174

Query: 362 KPS 370
           KP+
Sbjct: 175 KPT 177


>sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1
          Length = 177

 Score =  170 bits (430), Expect = 4e-42
 Identities = 76/123 (61%), Positives = 90/123 (73%)
 Frame = +2

Query: 2   VSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG 181
           VS M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYRE+   
Sbjct: 55  VSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHAS 114

Query: 182 SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQ 361
            GYYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ   F+  
Sbjct: 115 PGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAY 174

Query: 362 KPS 370
           KP+
Sbjct: 175 KPT 177


>sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU40A, chloroplastic OS=Lemna gibba GN=SSU40A PE=3 SV=1
          Length = 177

 Score =  170 bits (430), Expect = 4e-42
 Identities = 76/123 (61%), Positives = 90/123 (73%)
 Frame = +2

Query: 2   VSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG 181
           VS M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYRE+   
Sbjct: 55  VSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHAS 114

Query: 182 SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQ 361
            GYYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ   F+  
Sbjct: 115 PGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAY 174

Query: 362 KPS 370
           KP+
Sbjct: 175 KPT 177


>sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1
          Length = 177

 Score =  170 bits (430), Expect = 4e-42
 Identities = 76/123 (61%), Positives = 90/123 (73%)
 Frame = +2

Query: 2   VSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG 181
           VS M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYRE+   
Sbjct: 55  VSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHAS 114

Query: 182 SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQ 361
            GYYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ   F+  
Sbjct: 115 PGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAY 174

Query: 362 KPS 370
           KP+
Sbjct: 175 KPT 177


>sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU1, chloroplastic OS=Lemna gibba GN=SSU1 PE=2 SV=2
          Length = 173

 Score =  169 bits (428), Expect = 7e-42
 Identities = 76/123 (61%), Positives = 90/123 (73%)
 Frame = +2

Query: 2   VSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG 181
           VS M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYRE+   
Sbjct: 51  VSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENNAS 110

Query: 182 SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQ 361
            GYYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ   F+  
Sbjct: 111 PGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAY 170

Query: 362 KPS 370
           KP+
Sbjct: 171 KPT 173


>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1
          Length = 180

 Score =  169 bits (427), Expect = 9e-42
 Identities = 77/125 (61%), Positives = 96/125 (76%), Gaps = 1/125 (0%)
 Frame = +2

Query: 2   VSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG 181
           VS M VW+PY+N KFETLSYLPPLS + +AKQ+D++++ GW PCIEFD  G+V RE    
Sbjct: 56  VSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDVQGTVTREGSTM 115

Query: 182 SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEY-PEAFIRVLGFDAKRQVQVSGFLV 358
            GYYDGRYW MWKLPMFGC D+A+VLREI EC K Y  + +IR LGFD  RQVQ + F+V
Sbjct: 116 PGYYDGRYWTMWKLPMFGCTDSASVLREIEECKKLYGKKCYIRCLGFDNTRQVQCASFIV 175

Query: 359 QKPSV 373
            +P++
Sbjct: 176 HQPTL 180
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 123
Score (bit) 241.0
E-value 2.0e-62
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943778|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_O17, 5'
         (517 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   241   2e-62
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   176   8e-43
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   174   2e-42
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   174   2e-42
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   174   2e-42
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   174   3e-42
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   172   7e-42
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   172   7e-42
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   171   2e-41
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   171   2e-41
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   171   2e-41
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   170   3e-41
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c...   170   4e-41
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza...   170   4e-41
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c...   170   4e-41
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   170   4e-41
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   168   1e-40
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...   168   2e-40
tr|A9NNZ8|A9NNZ8_PICSI Ribulose bisphosphate carboxylase small c...   168   2e-40
tr|A9NML5|A9NML5_PICSI Ribulose bisphosphate carboxylase small c...   168   2e-40
tr|A9NMJ1|A9NMJ1_PICSI Ribulose bisphosphate carboxylase small c...   168   2e-40
tr|A9NL36|A9NL36_PICSI Ribulose bisphosphate carboxylase small c...   168   2e-40
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c...   167   2e-40
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   167   4e-40
tr|A9NM29|A9NM29_PICSI Ribulose bisphosphate carboxylase small c...   167   4e-40
tr|A9NLD6|A9NLD6_PICSI Ribulose bisphosphate carboxylase small c...   167   4e-40
tr|A9NKU8|A9NKU8_PICSI Ribulose bisphosphate carboxylase small c...   167   4e-40
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   166   5e-40
tr|B3H5S2|B3H5S2_ARATH Uncharacterized protein At5g38410.3 OS=Ar...   166   5e-40
tr|A5PJI4|A5PJI4_BOVIN Putative uncharacterized protein OS=Bos t...   166   5e-40

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  241 bits (614), Expect = 2e-62
 Identities = 108/123 (87%), Positives = 119/123 (96%)
 Frame = +2

Query: 2   VSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG 181
           +SAMLVWKPYDNKKFETLSYLPPL+++QIAKQV++MVRKGWTPCIEFD IGSVYREHFHG
Sbjct: 51  ISAMLVWKPYDNKKFETLSYLPPLTNDQIAKQVEYMVRKGWTPCIEFDTIGSVYREHFHG 110

Query: 182 SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQ 361
           SGYYDGRYW+MWKLPMFGC D+ +VLREIAECAKEYP AFIRVLGFDAKRQVQV+GFLV+
Sbjct: 111 SGYYDGRYWIMWKLPMFGCTDSGSVLREIAECAKEYPTAFIRVLGFDAKRQVQVAGFLVK 170

Query: 362 KPS 370
           KPS
Sbjct: 171 KPS 173


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  176 bits (445), Expect = 8e-43
 Identities = 76/123 (61%), Positives = 94/123 (76%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   VSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFH 178
           V  M VW P   KK+ETLSYLPPLS E ++K++D+++R  W PC+EF+ + G VYREH H
Sbjct: 55  VQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEFELEHGFVYREHHH 114

Query: 179 GSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 358
             GYYDGRYW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD+ RQVQ   F+V
Sbjct: 115 SPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDSVRQVQCISFIV 174

Query: 359 QKP 367
            KP
Sbjct: 175 SKP 177


>tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small
           chain OS=Ammopiptanthus mongolicus PE=2 SV=1
          Length = 174

 Score =  174 bits (441), Expect = 2e-42
 Identities = 76/123 (61%), Positives = 94/123 (76%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   VSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFH 178
           V  MLVW P   KKFETLSYLPPLS E + K+V++++RKGW PC+EF+ + G VYRE+  
Sbjct: 47  VQCMLVWPPLGRKKFETLSYLPPLSIESLTKEVEYLLRKGWVPCLEFELEHGFVYRENNR 106

Query: 179 GSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 358
             GYYDGRYW MWKLPMFGC DA+ V++E+ EC KEYP AF+R++GFD KRQVQ   F+ 
Sbjct: 107 SPGYYDGRYWTMWKLPMFGCSDASQVMKELEECKKEYPTAFVRIIGFDNKRQVQCISFIA 166

Query: 359 QKP 367
            KP
Sbjct: 167 YKP 169


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  174 bits (441), Expect = 2e-42
 Identities = 79/126 (62%), Positives = 96/126 (76%), Gaps = 3/126 (2%)
 Frame = +2

Query: 2   VSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG 181
           V  M VW P    KFET SYLPPL+ +QIAKQVDFM+++   PCIEFD +GSV R +F G
Sbjct: 54  VQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSG 113

Query: 182 ---SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGF 352
              SGYYDGRYW MWKLPMFGC D+A VLREI EC + +P  ++RVLGFD+K+QVQ+ GF
Sbjct: 114 PGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGF 173

Query: 353 LVQKPS 370
           LV +P+
Sbjct: 174 LVARPN 179


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  174 bits (441), Expect = 2e-42
 Identities = 79/126 (62%), Positives = 96/126 (76%), Gaps = 3/126 (2%)
 Frame = +2

Query: 2   VSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG 181
           V  M VW P    KFET SYLPPL+ +QIAKQVDFM+++   PCIEFD +GSV R +F G
Sbjct: 54  VQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSG 113

Query: 182 ---SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGF 352
              SGYYDGRYW MWKLPMFGC D+A VLREI EC + +P  ++RVLGFD+K+QVQ+ GF
Sbjct: 114 PGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGF 173

Query: 353 LVQKPS 370
           LV +P+
Sbjct: 174 LVARPN 179


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
           chain OS=Populus trichocarpa PE=2 SV=1
          Length = 170

 Score =  174 bits (440), Expect = 3e-42
 Identities = 74/119 (62%), Positives = 91/119 (76%)
 Frame = +2

Query: 11  MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGY 190
           M  W P +NKKFE LSYLPPLS + IAK++D+M++KGW PC+EFD++GSV REH    GY
Sbjct: 50  MKTWNPINNKKFEALSYLPPLSEDSIAKEIDYMMKKGWIPCLEFDEVGSVRREHSRMPGY 109

Query: 191 YDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 367
           YDGRYW +WKLPMFGC D++ VL EI EC K YP+A+IR L FD K Q Q   F++QKP
Sbjct: 110 YDGRYWTLWKLPMFGCTDSSQVLEEIHECKKAYPDAYIRCLAFDNKHQGQCMAFVIQKP 168


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  172 bits (437), Expect = 7e-42
 Identities = 77/126 (61%), Positives = 96/126 (76%), Gaps = 3/126 (2%)
 Frame = +2

Query: 2   VSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG 181
           V  M VW P    KFET SYLPPL+ +QIAKQVD+M+++   PCIEFD +GSV R +F G
Sbjct: 89  VQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSG 148

Query: 182 ---SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGF 352
              SGYYDGRYW MWKLPMFGC D++ VLREI EC  ++P  ++RVLGFD+K+QVQ+ GF
Sbjct: 149 AGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGF 208

Query: 353 LVQKPS 370
           LV +P+
Sbjct: 209 LVSRPN 214


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  172 bits (437), Expect = 7e-42
 Identities = 77/126 (61%), Positives = 96/126 (76%), Gaps = 3/126 (2%)
 Frame = +2

Query: 2   VSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG 181
           V  M VW P    KFET SYLPPL+ +QIAKQVD+M+++   PCIEFD +GSV R +F G
Sbjct: 59  VQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSG 118

Query: 182 ---SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGF 352
              SGYYDGRYW MWKLPMFGC D++ VLREI EC  ++P  ++RVLGFD+K+QVQ+ GF
Sbjct: 119 AGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGF 178

Query: 353 LVQKPS 370
           LV +P+
Sbjct: 179 LVSRPN 184


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  171 bits (434), Expect = 2e-41
 Identities = 77/126 (61%), Positives = 95/126 (75%), Gaps = 3/126 (2%)
 Frame = +2

Query: 2   VSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG 181
           V  M VW P    KFET SYLPPLS +QIA+QVD+M+++   PCIEFD +G+V R +F G
Sbjct: 59  VQCMQVWNPIGQPKFETFSYLPPLSDDQIARQVDYMIQQNLIPCIEFDTVGAVSRTNFSG 118

Query: 182 SG---YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGF 352
           SG   YYDGRYW MWKLPMFGC D++ VLREI EC   YP  ++RVLGFD+K+QVQ+ GF
Sbjct: 119 SGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKTSYPSCWVRVLGFDSKKQVQICGF 178

Query: 353 LVQKPS 370
           LV +P+
Sbjct: 179 LVARPN 184


>tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small
           chain OS=Panax ginseng PE=2 SV=1
          Length = 183

 Score =  171 bits (434), Expect = 2e-41
 Identities = 75/123 (60%), Positives = 93/123 (75%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   VSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFH 178
           V  M VW P   KKFETLSYLP L+ EQ++K+VD+++R GW PC+EF+ + G VYREH H
Sbjct: 56  VQCMKVWPPLGLKKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEFELEHGFVYREHHH 115

Query: 179 GSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 358
             GYYDGRYW MWKLPMFGC D++ VL+E+ EC KEYP A+IR++GFD  RQVQ   F+ 
Sbjct: 116 SPGYYDGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPNAYIRIIGFDNVRQVQCISFIA 175

Query: 359 QKP 367
            KP
Sbjct: 176 FKP 178