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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK943783
Clone id YMU02A01NGRL0003_O22
Library
Length 527
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_O22. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
AGTGTGGAGTCTCAGCCATGCAGCTTTTAACTCGATCTTCAAACATCGTTCCAGAAATGT
CGCTCATGGTGTCTGCTACTTGTCCCTCTTTCTCTACCACCCGTTGCTTACTGCAGCGAC
AACCTCCCTTTCTACGCTCGGGCATTGCCGTGCTAACGGCCAAGTCGCCAAAGCGTCAAG
CTCCCAGTTTTGCGATTCCTGAGGACAACGCCGCTGTCGAATCCCCTTCCGATCGTTCTT
CGCCTCTTCCTCCTCCTCCTCCTCAGCAGGACAAAAAGATTCAAGCAAGGGAAGCAGCCC
AGAAAGGACAGACGACAGCTGCAGTGACAGGTGCCATTGCAGTCATACTTGGAGTAGCCT
ATCTTGTCTTGGGACAGCTGCTAGATTCTCGTGGTGTAAATCTTGTGCCACCCCCCCCAG
AAGCTTTTGAGCCATAATGATTTTCTGTACTAATCTTTTTGGTTGCATGGCTAGAGAGAA
ATAGCATATTTGACCCCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q5M6W3
Definition sp|Q5M6W3|CB063_MOUSE Uncharacterized protein C2orf63 homolog OS=Mus musculus
Align length 50
Score (bit) 34.3
E-value 0.33
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943783|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_O22, 5'
         (499 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5M6W3|CB063_MOUSE Uncharacterized protein C2orf63 homolog OS...    34   0.33 
sp|Q8I3Z1|MLRR1_PLAF7 MATH and LRR domain-containing protein PFE...    30   4.7  
sp|Q54G85|PSIJ_DICDI Protein psiJ OS=Dictyostelium discoideum GN...    30   6.3  
sp|Q6DIB5|MEG10_MOUSE Multiple epidermal growth factor-like doma...    30   8.2  
sp|Q96KG7|MEG10_HUMAN Multiple epidermal growth factor-like doma...    30   8.2  

>sp|Q5M6W3|CB063_MOUSE Uncharacterized protein C2orf63 homolog
           OS=Mus musculus PE=2 SV=1
          Length = 596

 Score = 34.3 bits (77), Expect = 0.33
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +3

Query: 15  AMQLLTRSSNIVPEMSLMVSATCPSFSTTRCLLQ---RQPPFLRSGIAVL 155
           AM+ + +S +I  +  + +   CP     RCL Q    +PPFL  G+AVL
Sbjct: 460 AMEHIQQSKDINTDDLIQLITACPQIDLIRCLTQERNEKPPFLSFGLAVL 509


>sp|Q8I3Z1|MLRR1_PLAF7 MATH and LRR domain-containing protein PFE0570w
            OS=Plasmodium falciparum (isolate 3D7) GN=PFE0570w PE=2
            SV=1
          Length = 10061

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -3

Query: 416  GGWHKIYTTRI*QLSQDKIGYSKYDCNGTCHCSC 315
            G W++IY  RI QL Q    ++++ C+   +CSC
Sbjct: 2739 GPWYQIYKNRITQLKQ-ATDFNEWKCHRDFYCSC 2771


>sp|Q54G85|PSIJ_DICDI Protein psiJ OS=Dictyostelium discoideum
           GN=psiJ PE=3 SV=1
          Length = 719

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -1

Query: 124 GCRCSKQRVVEKEGQVADTMSDISGTMFEDRVKSC 20
           GC   K++  +K+    D+ S I+G  F DRVK C
Sbjct: 397 GCSHLKKQCSDKDYCTIDSCSSITGECFFDRVKDC 431


>sp|Q6DIB5|MEG10_MOUSE Multiple epidermal growth factor-like domains
           10 OS=Mus musculus GN=Megf10 PE=1 SV=1
          Length = 1147

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 15/48 (31%)
 Frame = +2

Query: 317 SCSDRCHCSHT---------------WSSLSCLGTAARFSWCKSCATP 415
           +C++RC CSH                WS + C    A   W  +C+ P
Sbjct: 537 NCAERCDCSHADGCHPTTGHCRCLPGWSGVHCDSVCAEGRWGPNCSLP 584


>sp|Q96KG7|MEG10_HUMAN Multiple epidermal growth factor-like domains
           10 OS=Homo sapiens GN=MEGF10 PE=1 SV=1
          Length = 1140

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 15/48 (31%)
 Frame = +2

Query: 317 SCSDRCHCSHT---------------WSSLSCLGTAARFSWCKSCATP 415
           +C++RC CSH                WS + C    A   W  +C+ P
Sbjct: 537 NCAERCDCSHADGCHPTTGHCRCLPGWSGVHCDSVCAEGRWGPNCSLP 584
tr_hit_id Q5IS40
Definition tr|Q5IS40|Q5IS40_PANTR Neuronal cell adhesion protein OS=Pan troglodytes
Align length 59
Score (bit) 34.7
E-value 2.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943783|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_O22, 5'
         (499 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5IS40|Q5IS40_PANTR Neuronal cell adhesion protein OS=Pan tro...    35   2.6  
tr|Q75ML9|Q75ML9_HUMAN Putative uncharacterized protein NRCAM (F...    35   2.6  
tr|Q14CA1|Q14CA1_HUMAN NRCAM protein OS=Homo sapiens GN=NRCAM PE...    35   2.6  
tr|Q14BM2|Q14BM2_HUMAN NRCAM protein OS=Homo sapiens GN=NRCAM PE...    35   2.6  
tr|Q9QVN4|Q9QVN4_9MURI R NR-CaM 22 protein OS=Rattus sp. PE=4 SV=1     34   3.4  
tr|B7ZMV8|B7ZMV8_MOUSE Putative uncharacterized protein OS=Mus m...    34   3.4  
tr|B2RQ04|B2RQ04_MOUSE RIKEN cDNA 1700034F02 gene OS=Mus musculu...    34   3.4  
tr|Q5IS85|Q5IS85_9PRIM Neuronal cell adhesion protein OS=Saimiri...    34   3.4  

>tr|Q5IS40|Q5IS40_PANTR Neuronal cell adhesion protein OS=Pan
           troglodytes PE=2 SV=1
          Length = 1180

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 19/59 (32%), Positives = 33/59 (55%)
 Frame = +3

Query: 39  SNIVPEMSLMVSATCPSFSTTRCLLQRQPPFLRSGIAVLTAKSPKRQAPSFAIPEDNAA 215
           SN++PE +         F+ T+ + Q+QP      + V++AKS + + P+F  PE NA+
Sbjct: 205 SNVLPEDTREDYICYARFNHTQTIQQKQP----ISVKVISAKSSRERPPTFLTPEGNAS 259


>tr|Q75ML9|Q75ML9_HUMAN Putative uncharacterized protein NRCAM
           (Fragment) OS=Homo sapiens GN=NRCAM PE=2 SV=1
          Length = 383

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 19/59 (32%), Positives = 33/59 (55%)
 Frame = +3

Query: 39  SNIVPEMSLMVSATCPSFSTTRCLLQRQPPFLRSGIAVLTAKSPKRQAPSFAIPEDNAA 215
           SN++PE +         F+ T+ + Q+QP      + V++AKS + + P+F  PE NA+
Sbjct: 205 SNVLPEDTREDYICYARFNHTQTIQQKQP----ISVKVISAKSSRERPPTFLTPEGNAS 259


>tr|Q14CA1|Q14CA1_HUMAN NRCAM protein OS=Homo sapiens GN=NRCAM PE=2
           SV=1
          Length = 1180

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 19/59 (32%), Positives = 33/59 (55%)
 Frame = +3

Query: 39  SNIVPEMSLMVSATCPSFSTTRCLLQRQPPFLRSGIAVLTAKSPKRQAPSFAIPEDNAA 215
           SN++PE +         F+ T+ + Q+QP      + V++AKS + + P+F  PE NA+
Sbjct: 205 SNVLPEDTREDYICYARFNHTQTIQQKQP----ISVKVISAKSSRERPPTFLTPEGNAS 259


>tr|Q14BM2|Q14BM2_HUMAN NRCAM protein OS=Homo sapiens GN=NRCAM PE=2
           SV=1
          Length = 1192

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 19/59 (32%), Positives = 33/59 (55%)
 Frame = +3

Query: 39  SNIVPEMSLMVSATCPSFSTTRCLLQRQPPFLRSGIAVLTAKSPKRQAPSFAIPEDNAA 215
           SN++PE +         F+ T+ + Q+QP      + V++AKS + + P+F  PE NA+
Sbjct: 205 SNVLPEDTREDYICYARFNHTQTIQQKQP----ISVKVISAKSSRERPPTFLTPEGNAS 259


>tr|Q9QVN4|Q9QVN4_9MURI R NR-CaM 22 protein OS=Rattus sp. PE=4 SV=1
          Length = 1166

 Score = 34.3 bits (77), Expect = 3.4
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = +3

Query: 39  SNIVPEMSLMVSATCPSFSTTRCLLQRQPPFLRSGIAVLTAKSPKRQAPSFAIPEDN 209
           SN++PE +         F+ T+ + Q+QP  L+    V++AKS K + P+F  PE N
Sbjct: 176 SNVLPEDTREDYICYARFNHTQTIQQKQPISLK----VISAKSSKERPPTFLTPEGN 228


>tr|B7ZMV8|B7ZMV8_MOUSE Putative uncharacterized protein OS=Mus
           musculus PE=2 SV=1
          Length = 585

 Score = 34.3 bits (77), Expect = 3.4
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +3

Query: 15  AMQLLTRSSNIVPEMSLMVSATCPSFSTTRCLLQ---RQPPFLRSGIAVL 155
           AM+ + +S +I  +  + +   CP     RCL Q    +PPFL  G+AVL
Sbjct: 449 AMEHIQQSKDINTDDLIQLITACPQIDLIRCLTQERNEKPPFLSFGLAVL 498


>tr|B2RQ04|B2RQ04_MOUSE RIKEN cDNA 1700034F02 gene OS=Mus musculus
           GN=1700034F02Rik PE=2 SV=1
          Length = 596

 Score = 34.3 bits (77), Expect = 3.4
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +3

Query: 15  AMQLLTRSSNIVPEMSLMVSATCPSFSTTRCLLQ---RQPPFLRSGIAVL 155
           AM+ + +S +I  +  + +   CP     RCL Q    +PPFL  G+AVL
Sbjct: 460 AMEHIQQSKDINTDDLIQLITACPQIDLIRCLTQERNEKPPFLSFGLAVL 509


>tr|Q5IS85|Q5IS85_9PRIM Neuronal cell adhesion protein OS=Saimiri
           boliviensis PE=2 SV=1
          Length = 1180

 Score = 34.3 bits (77), Expect = 3.4
 Identities = 19/59 (32%), Positives = 33/59 (55%)
 Frame = +3

Query: 39  SNIVPEMSLMVSATCPSFSTTRCLLQRQPPFLRSGIAVLTAKSPKRQAPSFAIPEDNAA 215
           SN++PE +         F+ T+ + Q+QP      + V++AKS + + P+F  PE NA+
Sbjct: 205 SNVLPEDTREDYICYARFNHTQTIQQKQP----ISVKVISAKSNRERPPTFLTPEGNAS 259