DK943783
Clone id YMU02A01NGRL0003_O22
Library
Length 527
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_O22. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
AGTGTGGAGTCTCAGCCATGCAGCTTTTAACTCGATCTTCAAACATCGTTCCAGAAATGT
CGCTCATGGTGTCTGCTACTTGTCCCTCTTTCTCTACCACCCGTTGCTTACTGCAGCGAC
AACCTCCCTTTCTACGCTCGGGCATTGCCGTGCTAACGGCCAAGTCGCCAAAGCGTCAAG
CTCCCAGTTTTGCGATTCCTGAGGACAACGCCGCTGTCGAATCCCCTTCCGATCGTTCTT
CGCCTCTTCCTCCTCCTCCTCCTCAGCAGGACAAAAAGATTCAAGCAAGGGAAGCAGCCC
AGAAAGGACAGACGACAGCTGCAGTGACAGGTGCCATTGCAGTCATACTTGGAGTAGCCT
ATCTTGTCTTGGGACAGCTGCTAGATTCTCGTGGTGTAAATCTTGTGCCACCCCCCCCAG
AAGCTTTTGAGCCATAATGATTTTCTGTACTAATCTTTTTGGTTGCATGGCTAGAGAGAA
ATAGCATATTTGACCCCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q5M6W3
Definition sp|Q5M6W3|CB063_MOUSE Uncharacterized protein C2orf63 homolog OS=Mus musculus
Align length 50
Score (bit) 34.3
E-value 0.33
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943783|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_O22, 5'
(499 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5M6W3|CB063_MOUSE Uncharacterized protein C2orf63 homolog OS... 34 0.33
sp|Q8I3Z1|MLRR1_PLAF7 MATH and LRR domain-containing protein PFE... 30 4.7
sp|Q54G85|PSIJ_DICDI Protein psiJ OS=Dictyostelium discoideum GN... 30 6.3
sp|Q6DIB5|MEG10_MOUSE Multiple epidermal growth factor-like doma... 30 8.2
sp|Q96KG7|MEG10_HUMAN Multiple epidermal growth factor-like doma... 30 8.2

>sp|Q5M6W3|CB063_MOUSE Uncharacterized protein C2orf63 homolog
OS=Mus musculus PE=2 SV=1
Length = 596

Score = 34.3 bits (77), Expect = 0.33
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +3

Query: 15 AMQLLTRSSNIVPEMSLMVSATCPSFSTTRCLLQ---RQPPFLRSGIAVL 155
AM+ + +S +I + + + CP RCL Q +PPFL G+AVL
Sbjct: 460 AMEHIQQSKDINTDDLIQLITACPQIDLIRCLTQERNEKPPFLSFGLAVL 509


>sp|Q8I3Z1|MLRR1_PLAF7 MATH and LRR domain-containing protein PFE0570w
OS=Plasmodium falciparum (isolate 3D7) GN=PFE0570w PE=2
SV=1
Length = 10061

Score = 30.4 bits (67), Expect = 4.7
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3

Query: 416 GGWHKIYTTRI*QLSQDKIGYSKYDCNGTCHCSC 315
G W++IY RI QL Q ++++ C+ +CSC
Sbjct: 2739 GPWYQIYKNRITQLKQ-ATDFNEWKCHRDFYCSC 2771


>sp|Q54G85|PSIJ_DICDI Protein psiJ OS=Dictyostelium discoideum
GN=psiJ PE=3 SV=1
Length = 719

Score = 30.0 bits (66), Expect = 6.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1

Query: 124 GCRCSKQRVVEKEGQVADTMSDISGTMFEDRVKSC 20
GC K++ +K+ D+ S I+G F DRVK C
Sbjct: 397 GCSHLKKQCSDKDYCTIDSCSSITGECFFDRVKDC 431


>sp|Q6DIB5|MEG10_MOUSE Multiple epidermal growth factor-like domains
10 OS=Mus musculus GN=Megf10 PE=1 SV=1
Length = 1147

Score = 29.6 bits (65), Expect = 8.2
Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 15/48 (31%)
Frame = +2

Query: 317 SCSDRCHCSHT---------------WSSLSCLGTAARFSWCKSCATP 415
+C++RC CSH WS + C A W +C+ P
Sbjct: 537 NCAERCDCSHADGCHPTTGHCRCLPGWSGVHCDSVCAEGRWGPNCSLP 584


>sp|Q96KG7|MEG10_HUMAN Multiple epidermal growth factor-like domains
10 OS=Homo sapiens GN=MEGF10 PE=1 SV=1
Length = 1140

Score = 29.6 bits (65), Expect = 8.2
Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 15/48 (31%)
Frame = +2

Query: 317 SCSDRCHCSHT---------------WSSLSCLGTAARFSWCKSCATP 415
+C++RC CSH WS + C A W +C+ P
Sbjct: 537 NCAERCDCSHADGCHPTTGHCRCLPGWSGVHCDSVCAEGRWGPNCSLP 584


tr_hit_id Q5IS40
Definition tr|Q5IS40|Q5IS40_PANTR Neuronal cell adhesion protein OS=Pan troglodytes
Align length 59
Score (bit) 34.7
E-value 2.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943783|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_O22, 5'
(499 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q5IS40|Q5IS40_PANTR Neuronal cell adhesion protein OS=Pan tro... 35 2.6
tr|Q75ML9|Q75ML9_HUMAN Putative uncharacterized protein NRCAM (F... 35 2.6
tr|Q14CA1|Q14CA1_HUMAN NRCAM protein OS=Homo sapiens GN=NRCAM PE... 35 2.6
tr|Q14BM2|Q14BM2_HUMAN NRCAM protein OS=Homo sapiens GN=NRCAM PE... 35 2.6
tr|Q9QVN4|Q9QVN4_9MURI R NR-CaM 22 protein OS=Rattus sp. PE=4 SV=1 34 3.4
tr|B7ZMV8|B7ZMV8_MOUSE Putative uncharacterized protein OS=Mus m... 34 3.4
tr|B2RQ04|B2RQ04_MOUSE RIKEN cDNA 1700034F02 gene OS=Mus musculu... 34 3.4
tr|Q5IS85|Q5IS85_9PRIM Neuronal cell adhesion protein OS=Saimiri... 34 3.4

>tr|Q5IS40|Q5IS40_PANTR Neuronal cell adhesion protein OS=Pan
troglodytes PE=2 SV=1
Length = 1180

Score = 34.7 bits (78), Expect = 2.6
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +3

Query: 39 SNIVPEMSLMVSATCPSFSTTRCLLQRQPPFLRSGIAVLTAKSPKRQAPSFAIPEDNAA 215
SN++PE + F+ T+ + Q+QP + V++AKS + + P+F PE NA+
Sbjct: 205 SNVLPEDTREDYICYARFNHTQTIQQKQP----ISVKVISAKSSRERPPTFLTPEGNAS 259


>tr|Q75ML9|Q75ML9_HUMAN Putative uncharacterized protein NRCAM
(Fragment) OS=Homo sapiens GN=NRCAM PE=2 SV=1
Length = 383

Score = 34.7 bits (78), Expect = 2.6
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +3

Query: 39 SNIVPEMSLMVSATCPSFSTTRCLLQRQPPFLRSGIAVLTAKSPKRQAPSFAIPEDNAA 215
SN++PE + F+ T+ + Q+QP + V++AKS + + P+F PE NA+
Sbjct: 205 SNVLPEDTREDYICYARFNHTQTIQQKQP----ISVKVISAKSSRERPPTFLTPEGNAS 259


>tr|Q14CA1|Q14CA1_HUMAN NRCAM protein OS=Homo sapiens GN=NRCAM PE=2
SV=1
Length = 1180

Score = 34.7 bits (78), Expect = 2.6
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +3

Query: 39 SNIVPEMSLMVSATCPSFSTTRCLLQRQPPFLRSGIAVLTAKSPKRQAPSFAIPEDNAA 215
SN++PE + F+ T+ + Q+QP + V++AKS + + P+F PE NA+
Sbjct: 205 SNVLPEDTREDYICYARFNHTQTIQQKQP----ISVKVISAKSSRERPPTFLTPEGNAS 259


>tr|Q14BM2|Q14BM2_HUMAN NRCAM protein OS=Homo sapiens GN=NRCAM PE=2
SV=1
Length = 1192

Score = 34.7 bits (78), Expect = 2.6
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +3

Query: 39 SNIVPEMSLMVSATCPSFSTTRCLLQRQPPFLRSGIAVLTAKSPKRQAPSFAIPEDNAA 215
SN++PE + F+ T+ + Q+QP + V++AKS + + P+F PE NA+
Sbjct: 205 SNVLPEDTREDYICYARFNHTQTIQQKQP----ISVKVISAKSSRERPPTFLTPEGNAS 259


>tr|Q9QVN4|Q9QVN4_9MURI R NR-CaM 22 protein OS=Rattus sp. PE=4 SV=1
Length = 1166

Score = 34.3 bits (77), Expect = 3.4
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +3

Query: 39 SNIVPEMSLMVSATCPSFSTTRCLLQRQPPFLRSGIAVLTAKSPKRQAPSFAIPEDN 209
SN++PE + F+ T+ + Q+QP L+ V++AKS K + P+F PE N
Sbjct: 176 SNVLPEDTREDYICYARFNHTQTIQQKQPISLK----VISAKSSKERPPTFLTPEGN 228


>tr|B7ZMV8|B7ZMV8_MOUSE Putative uncharacterized protein OS=Mus
musculus PE=2 SV=1
Length = 585

Score = 34.3 bits (77), Expect = 3.4
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +3

Query: 15 AMQLLTRSSNIVPEMSLMVSATCPSFSTTRCLLQ---RQPPFLRSGIAVL 155
AM+ + +S +I + + + CP RCL Q +PPFL G+AVL
Sbjct: 449 AMEHIQQSKDINTDDLIQLITACPQIDLIRCLTQERNEKPPFLSFGLAVL 498


>tr|B2RQ04|B2RQ04_MOUSE RIKEN cDNA 1700034F02 gene OS=Mus musculus
GN=1700034F02Rik PE=2 SV=1
Length = 596

Score = 34.3 bits (77), Expect = 3.4
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +3

Query: 15 AMQLLTRSSNIVPEMSLMVSATCPSFSTTRCLLQ---RQPPFLRSGIAVL 155
AM+ + +S +I + + + CP RCL Q +PPFL G+AVL
Sbjct: 460 AMEHIQQSKDINTDDLIQLITACPQIDLIRCLTQERNEKPPFLSFGLAVL 509


>tr|Q5IS85|Q5IS85_9PRIM Neuronal cell adhesion protein OS=Saimiri
boliviensis PE=2 SV=1
Length = 1180

Score = 34.3 bits (77), Expect = 3.4
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +3

Query: 39 SNIVPEMSLMVSATCPSFSTTRCLLQRQPPFLRSGIAVLTAKSPKRQAPSFAIPEDNAA 215
SN++PE + F+ T+ + Q+QP + V++AKS + + P+F PE NA+
Sbjct: 205 SNVLPEDTREDYICYARFNHTQTIQQKQP----ISVKVISAKSNRERPPTFLTPEGNAS 259