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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK943795
Clone id YMU02A01NGRL0003_P15
Library
Length 260
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_P15. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence 
GAAGCAGTGGTATCAACGCAGAGTGCCATTACCGCCGGGTGGTACTGTGTCATCTAAACC
ATCACACCCTGCTCATAGTATCTGTACCTATCTCGGTTCAATATTAGGGTTTACCGACCT
TTGTGGCTTTATTAGTCGGAGCTTGTTTAGCTCTGTCATGACAATCATGATGGAGGGCTT
TTGTATACCTGTCTATGTGCTTTATCTAACTTCAAATTTTGTGGTGCGGCGGCAACCAAA
CGTTCTAAAAAAATCCATGT
■■Homology search results ■■ -
sp_hit_id Q6L786
Definition sp|Q6L786|MRGRD_MACFA Mas-related G-protein coupled receptor member D OS=Macaca fascicularis
Align length 47
Score (bit) 29.3
E-value 6.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943795|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_P15, 5'
         (221 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6L786|MRGRD_MACFA Mas-related G-protein coupled receptor mem...    29   6.3  

>sp|Q6L786|MRGRD_MACFA Mas-related G-protein coupled receptor member
           D OS=Macaca fascicularis GN=MRGPRD PE=2 SV=1
          Length = 320

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +2

Query: 35  HSICTYLGSILGFTDLCGFISRSLFSSVMTIMMEGFCIPVYVLYLTS 175
           H+ C  L S+  FT LCG    S+   ++   M      +Y+L L +
Sbjct: 24  HAACLVLSSLAMFTCLCGMAGNSMVIWLLGFRMRRTPFSIYILNLAA 70
tr_hit_id Q4L9X6
Definition tr|Q4L9X6|Q4L9X6_STAHJ Similar to unknown protein OS=Staphylococcus haemolyticus (strain JCSC1435)
Align length 55
Score (bit) 33.1
E-value 7.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943795|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_P15, 5'
         (221 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4L9X6|Q4L9X6_STAHJ Similar to unknown protein OS=Staphylococ...    33   7.2  

>tr|Q4L9X6|Q4L9X6_STAHJ Similar to unknown protein OS=Staphylococcus
           haemolyticus (strain JCSC1435) GN=SH0240 PE=4 SV=1
          Length = 201

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = +2

Query: 53  LGSILGFTDLCGFISRSLFSSVMTIMMEGFCIPVYVLYLTSNFVVRRQPNVLKKS 217
           LG +L F    G I    F    T  + GFCI    LY+ +  + RR  N+ +KS
Sbjct: 102 LGFLLSFDLHKGLIGSIAFIPHYTFEIMGFCILASALYMLNKAITRRFTNLFRKS 156