BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943800|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_P22, 5'
         (230 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6PA97|TPPC9_XENLA Trafficking protein particle complex subun...    30   5.0  
sp|Q1KMR4|PDK4_RHIFE [Pyruvate dehydrogenase [lipoamide]] kinase...    30   5.0  
sp|Q68WM5|MIAA_RICTY tRNA delta(2)-isopentenylpyrophosphate tran...    30   5.0  
sp|Q38VY5|UNG_LACSS Uracil-DNA glycosylase OS=Lactobacillus sake...    29   6.5  

>sp|Q6PA97|TPPC9_XENLA Trafficking protein particle complex subunit 9
            OS=Xenopus laevis GN=trappc9 PE=2 SV=1
          Length = 1151

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -2

Query: 124  CNRHGQNPTSLSTFPFQAYTGGLHHH 47
            C+++   P +L+  P+Q Y  G+H+H
Sbjct: 1049 CSKNAVGPFALTVIPYQDYQNGVHNH 1074


>sp|Q1KMR4|PDK4_RHIFE [Pyruvate dehydrogenase [lipoamide]] kinase
           isozyme 4, mitochondrial OS=Rhinolophus ferrumequinum
           GN=PDK4 PE=2 SV=1
          Length = 412

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = -3

Query: 201 KFIGEPFYNLYMPSKTHC*FKMGNITATAMVKTLLHSQHSPSKLILVVSI 52
           KF GEP + +Y+PS  H    +  +   AM  T+ H ++ PS   + V++
Sbjct: 233 KFPGEPIHIVYVPSHLH--HMLFELFKNAMRATVEHQENEPSLTPVEVTV 280


>sp|Q68WM5|MIAA_RICTY tRNA delta(2)-isopentenylpyrophosphate
           transferase OS=Rickettsia typhi GN=miaA PE=3 SV=1
          Length = 311

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -2

Query: 94  LSTFPFQAYTGGLHHHLHLFIRYIIDWKLIK 2
           ++  P Q Y  G+H+HL+ F+    D+ +IK
Sbjct: 47  ITASPIQIYNTGIHYHLYNFLSITEDFSVIK 77


>sp|Q38VY5|UNG_LACSS Uracil-DNA glycosylase OS=Lactobacillus sakei
           subsp. sakei (strain 23K) GN=ung PE=3 SV=1
          Length = 229

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 9/21 (42%), Positives = 17/21 (80%)
 Frame = -1

Query: 158 KRIVSSRWETLLQPPWSKPYF 96
           K I+ + W+T+L+P ++KPY+
Sbjct: 2   KTIIHNDWQTVLEPEFAKPYY 22

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943800|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_P22, 5'
         (230 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******