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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK943814
Clone id YMU02A01NGRL0004_A15
Library
Length 341
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0004_A15. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GTGCAGAAGTTTGCGTTCAGGCGATTCTACATGACGAAGTGAAGAATAAGGCTTTTGATT
TGACCTCCAAGCCTGAGGGTGTAGCCCCTCCAACTACTGACTTTAAAGCACTGTTCAGCC
AAGTAACTGCAAGCTTTTAGATGACCAGTCTCGGCTAAATGTGCCGGGAAATTTCCTTTT
ACTTGGCTCTGTATCATAAAAGTCCATAGGGGCTTTGTATATGATAGACATTGATGTGCT
ATCGAAAGCACAAAGAGTTCTGTACATGTCCTACAAATGTTGCAAGTTGCAATTTATGTG
AAGTTTGAAGCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q94EG6
Definition sp|Q94EG6|Y5224_ARATH Uncharacterized protein At5g02240 OS=Arabidopsis thaliana
Align length 45
Score (bit) 71.2
E-value 1.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943814|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_A15, 5'
         (312 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q94EG6|Y5224_ARATH Uncharacterized protein At5g02240 OS=Arabi...    71   1e-12
sp|O80934|Y2766_ARATH Uncharacterized protein At2g37660, chlorop...    62   9e-10
sp|P32044|KPYK_THEAC Pyruvate kinase OS=Thermoplasma acidophilum...    31   1.7  
sp|Q4UK20|ACON_RICFE Aconitate hydratase OS=Rickettsia felis GN=...    29   6.4  
sp|Q5UPR3|YR777_MIMIV Putative ankyrin repeat protein R777 OS=Ac...    29   8.3  

>sp|Q94EG6|Y5224_ARATH Uncharacterized protein At5g02240
           OS=Arabidopsis thaliana GN=At5g02240 PE=1 SV=1
          Length = 253

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 33/45 (73%), Positives = 38/45 (84%)
 Frame = +3

Query: 3   AEVCVQAILHDEVKNKAFDLTSKPEGVAPPTTDFKALFSQVTASF 137
           AEVC+QA+L +E KNKAFDL SKPEG + PT DFKALFSQVT+ F
Sbjct: 209 AEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSRF 253


>sp|O80934|Y2766_ARATH Uncharacterized protein At2g37660,
           chloroplastic OS=Arabidopsis thaliana GN=At2g37660 PE=1
           SV=2
          Length = 325

 Score = 62.0 bits (149), Expect = 9e-10
 Identities = 30/45 (66%), Positives = 33/45 (73%)
 Frame = +3

Query: 3   AEVCVQAILHDEVKNKAFDLTSKPEGVAPPTTDFKALFSQVTASF 137
           AEVCVQA+  +E K KA DL SKPEG   PT DFKALF+QVT  F
Sbjct: 281 AEVCVQALQLEEAKFKALDLASKPEGTGTPTKDFKALFTQVTTKF 325


>sp|P32044|KPYK_THEAC Pyruvate kinase OS=Thermoplasma acidophilum
           GN=Ta0896 PE=1 SV=2
          Length = 544

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 12/29 (41%), Positives = 22/29 (75%)
 Frame = +2

Query: 110 TVQPSNCKLLDDQSRLNVPGNFLLLGSVS 196
           T++  N  +L D+SR+N+PG F+ LG+++
Sbjct: 126 TIRALNDGVLRDRSRVNIPGRFIELGTIT 154


>sp|Q4UK20|ACON_RICFE Aconitate hydratase OS=Rickettsia felis
           GN=acnA PE=3 SV=1
          Length = 878

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
 Frame = -1

Query: 240 STSMSIIYKAPMDFYDTEPSKRKFPGT-----FSRDWSSKSLQLLG*TVL*SQ*LEGLH 79
           S++   IY A MD+   +     F G       SRDW++K  QLLG   + ++  E +H
Sbjct: 730 SSTQQTIYDAAMDYKANDVPVVIFAGKEYGSGSSRDWAAKGPQLLGVKAVIAESFERIH 788


>sp|Q5UPR3|YR777_MIMIV Putative ankyrin repeat protein R777
           OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R777 PE=4
           SV=1
          Length = 305

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -2

Query: 155 AETGHLKACSYLAEQCFKVSSWRGYTLRLGGQIKSL-ILHFVM*NRLNAN 9
           A+ GHL   SYL E+     S + Y +RL  +     ++ F++ N  NAN
Sbjct: 71  AKNGHLDVVSYLVEKGANPKSSKDYGMRLAAKYGHYEVVKFLVENGCNAN 120
tr_hit_id B6T962
Definition tr|B6T962|B6T962_MAIZE NAD-dependent epimerase/dehydratase OS=Zea mays
Align length 45
Score (bit) 68.6
E-value 2.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943814|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_A15, 5'
         (312 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6T962|B6T962_MAIZE NAD-dependent epimerase/dehydratase OS=Ze...    69   2e-10
tr|Q852A3|Q852A3_ORYSJ Os03g0822200 protein OS=Oryza sativa subs...    67   3e-10
tr|B8AMC4|B8AMC4_ORYSI Putative uncharacterized protein OS=Oryza...    67   3e-10
tr|A3AP61|A3AP61_ORYSJ Putative uncharacterized protein OS=Oryza...    67   3e-10
tr|A9NPJ0|A9NPJ0_PICSI Putative uncharacterized protein OS=Picea...    65   2e-09
tr|B4FH62|B4FH62_MAIZE NAD-dependent epimerase/dehydratase OS=Ze...    65   2e-09
tr|Q94HJ5|Q94HJ5_ORYSA Putative 3-beta hydroxysteroid dehydrogen...    64   3e-09
tr|Q65XW4|Q65XW4_ORYSJ Os05g0110300 protein OS=Oryza sativa subs...    64   3e-09
tr|B7FIE9|B7FIE9_MEDTR Putative uncharacterized protein OS=Medic...    64   3e-09
tr|A3AZ78|A3AZ78_ORYSJ Putative uncharacterized protein OS=Oryza...    64   3e-09
tr|A9TK47|A9TK47_PHYPA Predicted protein OS=Physcomitrella paten...    63   6e-09
tr|A9RUS0|A9RUS0_PHYPA Predicted protein OS=Physcomitrella paten...    63   8e-09
tr|A2XZK1|A2XZK1_ORYSI Putative uncharacterized protein OS=Oryza...    62   1e-08
tr|A7PNN9|A7PNN9_VITVI Chromosome chr8 scaffold_23, whole genome...    60   5e-08
tr|A9SVW7|A9SVW7_PHYPA Predicted protein OS=Physcomitrella paten...    58   3e-07
tr|B0C525|B0C525_ACAM1 Nucleoside-diphosphate-sugar epimerase, p...    52   1e-05
tr|B1WP44|B1WP44_CYAA5 Putative uncharacterized protein OS=Cyano...    46   8e-04
tr|A3INY5|A3INY5_9CHRO Putative uncharacterized protein OS=Cyano...    46   0.001
tr|B7KGS7|B7KGS7_9CHRO Nucleoside-diphosphate-sugar epimerase, p...    45   0.001
tr|Q4C2G1|Q4C2G1_CROWT Similar to Nucleoside-diphosphate-sugar e...    43   0.007
tr|B4B3X6|B4B3X6_9CHRO 3-beta hydroxysteroid dehydrogenase/isome...    41   0.026
tr|B7JXZ0|B7JXZ0_SYNP8 Nucleoside-diphosphate-sugar epimerase, p...    41   0.034
tr|B4C357|B4C357_9CHRO Nucleoside-diphosphate-sugar epimerase, p...    41   0.034
tr|A0Z9Z4|A0Z9Z4_NODSP Putative uncharacterized protein OS=Nodul...    40   0.045
tr|A8J1Z2|A8J1Z2_CHLRE Isomerase OS=Chlamydomonas reinhardtii GN...    38   0.22 
tr|Q3MEG2|Q3MEG2_ANAVT NAD-dependent epimerase/dehydratase OS=An...    35   1.4  
tr|A3IKG7|A3IKG7_9CHRO Putative uncharacterized protein OS=Cyano...    35   1.4  
tr|A0YIW3|A0YIW3_9CYAN Putative uncharacterized protein OS=Lyngb...    35   2.5  
tr|Q8YT24|Q8YT24_ANASP Alr2903 protein OS=Anabaena sp. (strain P...    34   3.2  

>tr|B6T962|B6T962_MAIZE NAD-dependent epimerase/dehydratase OS=Zea
           mays PE=2 SV=1
          Length = 257

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 32/45 (71%), Positives = 37/45 (82%)
 Frame = +3

Query: 3   AEVCVQAILHDEVKNKAFDLTSKPEGVAPPTTDFKALFSQVTASF 137
           AEVCVQA+ ++E K KAFDL SKPEGV  PT DF+ALFSQ+TA F
Sbjct: 213 AEVCVQALQYEEAKFKAFDLASKPEGVGTPTKDFRALFSQITARF 257


>tr|Q852A3|Q852A3_ORYSJ Os03g0822200 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBb0081B07.22 PE=2 SV=1
          Length = 257

 Score = 67.4 bits (163), Expect = 3e-10
 Identities = 32/45 (71%), Positives = 36/45 (80%)
 Frame = +3

Query: 3   AEVCVQAILHDEVKNKAFDLTSKPEGVAPPTTDFKALFSQVTASF 137
           AEVCVQA+ ++E K KAFDL SKPEG   PT DFK+LFSQVTA F
Sbjct: 213 AEVCVQALQYEETKFKAFDLASKPEGTGTPTKDFKSLFSQVTARF 257


>tr|B8AMC4|B8AMC4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_14111 PE=4 SV=1
          Length = 257

 Score = 67.4 bits (163), Expect = 3e-10
 Identities = 32/45 (71%), Positives = 36/45 (80%)
 Frame = +3

Query: 3   AEVCVQAILHDEVKNKAFDLTSKPEGVAPPTTDFKALFSQVTASF 137
           AEVCVQA+ ++E K KAFDL SKPEG   PT DFK+LFSQVTA F
Sbjct: 213 AEVCVQALQYEETKFKAFDLASKPEGTGTPTKDFKSLFSQVTARF 257


>tr|A3AP61|A3AP61_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_012583 PE=4 SV=1
          Length = 238

 Score = 67.4 bits (163), Expect = 3e-10
 Identities = 32/45 (71%), Positives = 36/45 (80%)
 Frame = +3

Query: 3   AEVCVQAILHDEVKNKAFDLTSKPEGVAPPTTDFKALFSQVTASF 137
           AEVCVQA+ ++E K KAFDL SKPEG   PT DFK+LFSQVTA F
Sbjct: 194 AEVCVQALQYEETKFKAFDLASKPEGTGTPTKDFKSLFSQVTARF 238


>tr|A9NPJ0|A9NPJ0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 254

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 32/45 (71%), Positives = 35/45 (77%)
 Frame = +3

Query: 3   AEVCVQAILHDEVKNKAFDLTSKPEGVAPPTTDFKALFSQVTASF 137
           AEV VQA+L +E KNKAFDL SKPE    PTTDFKALFSQV+  F
Sbjct: 210 AEVSVQALLIEEAKNKAFDLASKPEEAGSPTTDFKALFSQVSTKF 254


>tr|B4FH62|B4FH62_MAIZE NAD-dependent epimerase/dehydratase OS=Zea
           mays PE=2 SV=1
          Length = 298

 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 30/45 (66%), Positives = 36/45 (80%)
 Frame = +3

Query: 3   AEVCVQAILHDEVKNKAFDLTSKPEGVAPPTTDFKALFSQVTASF 137
           AEVC+QA+L +E K KAFDL SKPEG   PTTDF+ALF+QV + F
Sbjct: 254 AEVCIQALLFEESKFKAFDLASKPEGEGTPTTDFRALFAQVNSRF 298


>tr|Q94HJ5|Q94HJ5_ORYSA Putative 3-beta hydroxysteroid
           dehydrogenase/isomerase protein OS=Oryza sativa PE=4
           SV=1
          Length = 293

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 30/45 (66%), Positives = 36/45 (80%)
 Frame = +3

Query: 3   AEVCVQAILHDEVKNKAFDLTSKPEGVAPPTTDFKALFSQVTASF 137
           AEVC+QA+L +E + KAFDL SKPEG   PTTDF+ALFSQV + F
Sbjct: 249 AEVCLQALLFEEARFKAFDLASKPEGEGVPTTDFRALFSQVNSRF 293


>tr|Q65XW4|Q65XW4_ORYSJ Os05g0110300 protein OS=Oryza sativa subsp.
           japonica GN=P0016H04.4 PE=2 SV=1
          Length = 293

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 30/45 (66%), Positives = 36/45 (80%)
 Frame = +3

Query: 3   AEVCVQAILHDEVKNKAFDLTSKPEGVAPPTTDFKALFSQVTASF 137
           AEVC+QA+L +E + KAFDL SKPEG   PTTDF+ALFSQV + F
Sbjct: 249 AEVCLQALLFEEARFKAFDLASKPEGEGVPTTDFRALFSQVNSRF 293


>tr|B7FIE9|B7FIE9_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 255

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 30/45 (66%), Positives = 35/45 (77%)
 Frame = +3

Query: 3   AEVCVQAILHDEVKNKAFDLTSKPEGVAPPTTDFKALFSQVTASF 137
           AEVCVQ + ++E K KAFDL SKPEG   PT DFKALFSQ+T+ F
Sbjct: 211 AEVCVQVLNYEETKLKAFDLASKPEGAGEPTKDFKALFSQLTSRF 255


>tr|A3AZ78|A3AZ78_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_016100 PE=4 SV=1
          Length = 227

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 30/45 (66%), Positives = 36/45 (80%)
 Frame = +3

Query: 3   AEVCVQAILHDEVKNKAFDLTSKPEGVAPPTTDFKALFSQVTASF 137
           AEVC+QA+L +E + KAFDL SKPEG   PTTDF+ALFSQV + F
Sbjct: 183 AEVCLQALLFEEARFKAFDLASKPEGEGVPTTDFRALFSQVNSRF 227