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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK943828
Clone id YMU02A01NGRL0004_B09
Library
Length 175
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0004_B09. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
CTCTAAAGCCCCCAAAGATGTCAAGATTCAGGGTATTTGGTATGCGCAAGTAGAGTAGAC
GGAGAAAACTTGGGGTCTTTCCTTTCGCAAGGCCCTGGCTTGACCCTGTCCTTGTTTCTA
TATTGTTATGTAAAGCAAAGTTCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id O49079
Definition sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1, chloroplastic OS=Fritillaria agrestis
Align length 18
Score (bit) 40.0
E-value 0.004
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943828|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_B09, 5'
         (145 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1, chlorop...    40   0.004
sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloropla...    39   0.010
sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer protein 1, chlorop...    37   0.023
sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer protein 1, chlorop...    37   0.023
sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1, chlorop...    37   0.023
sp|P27665|PSBO_WHEAT Oxygen-evolving enhancer protein 1, chlorop...    37   0.039
sp|Q9S841|PSBO2_ARATH Oxygen-evolving enhancer protein 1-2, chlo...    36   0.051
sp|P12359|PSBO_SPIOL Oxygen-evolving enhancer protein 1, chlorop...    36   0.067
sp|P23321|PSBO1_ARATH Oxygen-evolving enhancer protein 1-1, chlo...    35   0.088
sp|P46483|PSBO_EUGGR Oxygen-evolving enhancer protein 1, chlorop...    32   1.3  
sp|P12853|PSBO_CHLRE Oxygen-evolving enhancer protein 1, chlorop...    32   1.3  
sp|Q9SBN6|PSBO_VOLCA Oxygen-evolving enhancer protein 1, chlorop...    30   3.7  

>sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1,
           chloroplastic OS=Fritillaria agrestis GN=PSBO PE=2 SV=1
          Length = 329

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 17/18 (94%), Positives = 18/18 (100%)
 Frame = +2

Query: 2   SKAPKDVKIQGIWYAQVE 55
           SKAPKDVKIQGIWYAQ+E
Sbjct: 312 SKAPKDVKIQGIWYAQLE 329


>sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1,
           chloroplastic OS=Pisum sativum GN=PSBO PE=2 SV=1
          Length = 329

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 15/18 (83%), Positives = 18/18 (100%)
 Frame = +2

Query: 2   SKAPKDVKIQGIWYAQVE 55
           +KAPKDVKIQG+WYAQ+E
Sbjct: 311 AKAPKDVKIQGVWYAQLE 328


>sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer protein 1,
           chloroplastic OS=Nicotiana tabacum GN=PSBO PE=2 SV=1
          Length = 332

 Score = 37.4 bits (85), Expect = 0.023
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +2

Query: 2   SKAPKDVKIQGIWYAQVE 55
           +K PKDVKIQGIWYAQ+E
Sbjct: 315 AKVPKDVKIQGIWYAQLE 332


>sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer protein 1,
           chloroplastic OS=Solanum tuberosum GN=PSBO PE=2 SV=1
          Length = 333

 Score = 37.4 bits (85), Expect = 0.023
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +2

Query: 2   SKAPKDVKIQGIWYAQVE 55
           +K PKDVKIQGIWYAQ+E
Sbjct: 315 AKTPKDVKIQGIWYAQLE 332


>sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1,
           chloroplastic OS=Solanum lycopersicum GN=PSBO PE=2 SV=2
          Length = 329

 Score = 37.4 bits (85), Expect = 0.023
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +2

Query: 2   SKAPKDVKIQGIWYAQVE 55
           +K PKDVKIQGIWYAQ+E
Sbjct: 312 AKVPKDVKIQGIWYAQLE 329


>sp|P27665|PSBO_WHEAT Oxygen-evolving enhancer protein 1,
           chloroplastic OS=Triticum aestivum GN=PSBO PE=2 SV=1
          Length = 325

 Score = 36.6 bits (83), Expect = 0.039
 Identities = 14/17 (82%), Positives = 17/17 (100%)
 Frame = +2

Query: 5   KAPKDVKIQGIWYAQVE 55
           +APKDVKIQG+WYAQ+E
Sbjct: 307 EAPKDVKIQGVWYAQLE 323


>sp|Q9S841|PSBO2_ARATH Oxygen-evolving enhancer protein 1-2,
           chloroplastic OS=Arabidopsis thaliana GN=PSBO2 PE=1 SV=1
          Length = 331

 Score = 36.2 bits (82), Expect = 0.051
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = +2

Query: 2   SKAPKDVKIQGIWYAQVE 55
           +K PKDVKIQG+WY Q+E
Sbjct: 314 AKVPKDVKIQGVWYGQIE 331


>sp|P12359|PSBO_SPIOL Oxygen-evolving enhancer protein 1,
           chloroplastic OS=Spinacia oleracea GN=PSBO PE=1 SV=1
          Length = 332

 Score = 35.8 bits (81), Expect = 0.067
 Identities = 13/18 (72%), Positives = 17/18 (94%)
 Frame = +2

Query: 2   SKAPKDVKIQGIWYAQVE 55
           +K PKDVKI+G+WYAQ+E
Sbjct: 313 AKVPKDVKIEGVWYAQLE 330


>sp|P23321|PSBO1_ARATH Oxygen-evolving enhancer protein 1-1,
           chloroplastic OS=Arabidopsis thaliana GN=PSBO1 PE=1 SV=2
          Length = 332

 Score = 35.4 bits (80), Expect = 0.088
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = +2

Query: 2   SKAPKDVKIQGIWYAQVE 55
           +K PKDVKIQG+WY Q+E
Sbjct: 315 AKVPKDVKIQGVWYGQLE 332


>sp|P46483|PSBO_EUGGR Oxygen-evolving enhancer protein 1,
           chloroplastic OS=Euglena gracilis GN=PSBO PE=1 SV=2
          Length = 338

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +2

Query: 2   SKAPKDVKIQGIWYAQV 52
           +K PKD+K  G+WYAQ+
Sbjct: 318 AKVPKDIKTSGVWYAQI 334
tr_hit_id A9NV80
Definition tr|A9NV80|A9NV80_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 18
Score (bit) 40.8
E-value 0.035
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943828|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_B09, 5'
         (145 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NV80|A9NV80_PICSI Putative uncharacterized protein OS=Picea...    41   0.035
tr|A9NRV4|A9NRV4_PICSI Putative uncharacterized protein OS=Picea...    41   0.035
tr|B7FHI9|B7FHI9_MEDTR Putative uncharacterized protein OS=Medic...    39   0.17 
tr|B6T3B2|B6T3B2_MAIZE Oxygen-evolving enhancer protein 1 OS=Zea...    39   0.17 
tr|B4FRF2|B4FRF2_MAIZE Putative uncharacterized protein OS=Zea m...    39   0.17 
tr|B4F9R9|B4F9R9_MAIZE Oxygen-evolving enhancer protein 1 OS=Zea...    39   0.17 
tr|A5JV93|A5JV93_9POAL Chloroplast oxygen-evolving enhancer prot...    39   0.17 
tr|Q84QE8|Q84QE8_TOBAC Oxygen evolving complex 33 kDa photosyste...    37   0.38 
tr|Q58H58|Q58H58_NICBE Chloroplast photosynthetic oxygen-evolvin...    37   0.38 
tr|A9PK45|A9PK45_POPJC Putative uncharacterized protein OS=Popul...    37   0.38 
tr|Q943W1|Q943W1_ORYSJ cDNA clone:001-013-B04, full insert seque...    37   0.50 
tr|B8A8L8|B8A8L8_ORYSI Putative uncharacterized protein OS=Oryza...    37   0.50 
tr|A7NTK5|A7NTK5_VITVI Chromosome chr18 scaffold_1, whole genome...    37   0.50 
tr|A6N1L3|A6N1L3_ORYSI Oxygen-evolving enhancer protein 1 (Fragm...    37   0.50 
tr|A6N1E2|A6N1E2_ORYSI Oxygen-evolving enhancer protein 1 (Fragm...    37   0.50 
tr|A6N109|A6N109_ORYSI Oxygen-evolving enhancer protein 1 (Fragm...    37   0.50 
tr|A5BPG1|A5BPG1_VITVI Putative uncharacterized protein OS=Vitis...    37   0.50 
tr|Q9LRC4|Q9LRC4_9ROSI Oxygen evolving enhancer protein 1 OS=Bru...    36   0.85 
tr|B5BT06|B5BT06_SALEU 33 kDa protein of the oxygen-evolving com...    36   0.85 
tr|B0L803|B0L803_9CARY 33 kDa OEC protein (Fragment) OS=Salicorn...    36   0.85 
tr|A9PJ90|A9PJ90_POPJC Putative uncharacterized protein OS=Popul...    36   0.85 
tr|A9PHI5|A9PHI5_POPTR Putative uncharacterized protein OS=Popul...    36   0.85 
tr|A9PHA9|A9PHA9_POPTR Putative uncharacterized protein OS=Popul...    36   0.85 
tr|A9PGS6|A9PGS6_POPTR Putative uncharacterized protein OS=Popul...    36   0.85 
tr|Q6RUN4|Q6RUN4_TOBAC ERT12 (Fragment) OS=Nicotiana tabacum GN=...    35   1.5  
tr|Q6DV58|Q6DV58_BRAOL Photosystem II protein OS=Brassica olerac...    35   1.5  
tr|Q7XYP5|Q7XYP5_BIGNA Photosystem II protein PsbO OS=Bigelowiel...    35   1.9  
tr|A9CMA1|A9CMA1_9VIRI 33kDa oxygen evolving protein of photosys...    35   1.9  
tr|A9U1K9|A9U1K9_PHYPA Predicted protein OS=Physcomitrella paten...    35   2.5  
tr|A9CM96|A9CM96_9CHLO 33kDa oxygen evolving protein of photosys...    35   2.5  

>tr|A9NV80|A9NV80_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 341

 Score = 40.8 bits (94), Expect = 0.035
 Identities = 17/18 (94%), Positives = 18/18 (100%)
 Frame = +2

Query: 2   SKAPKDVKIQGIWYAQVE 55
           SKAPKDVKIQGIWYAQ+E
Sbjct: 322 SKAPKDVKIQGIWYAQIE 339


>tr|A9NRV4|A9NRV4_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 341

 Score = 40.8 bits (94), Expect = 0.035
 Identities = 17/18 (94%), Positives = 18/18 (100%)
 Frame = +2

Query: 2   SKAPKDVKIQGIWYAQVE 55
           SKAPKDVKIQGIWYAQ+E
Sbjct: 322 SKAPKDVKIQGIWYAQIE 339


>tr|B7FHI9|B7FHI9_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 170

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 15/18 (83%), Positives = 18/18 (100%)
 Frame = +2

Query: 2   SKAPKDVKIQGIWYAQVE 55
           +KAPKDVKIQG+WYAQ+E
Sbjct: 152 AKAPKDVKIQGVWYAQLE 169


>tr|B6T3B2|B6T3B2_MAIZE Oxygen-evolving enhancer protein 1 OS=Zea
           mays PE=2 SV=1
          Length = 329

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 15/18 (83%), Positives = 18/18 (100%)
 Frame = +2

Query: 2   SKAPKDVKIQGIWYAQVE 55
           +KAPKDVKIQG+WYAQ+E
Sbjct: 312 AKAPKDVKIQGVWYAQLE 329


>tr|B4FRF2|B4FRF2_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 230

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 15/18 (83%), Positives = 18/18 (100%)
 Frame = +2

Query: 2   SKAPKDVKIQGIWYAQVE 55
           +KAPKDVKIQG+WYAQ+E
Sbjct: 213 AKAPKDVKIQGVWYAQLE 230


>tr|B4F9R9|B4F9R9_MAIZE Oxygen-evolving enhancer protein 1 OS=Zea
           mays PE=2 SV=1
          Length = 335

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 15/18 (83%), Positives = 18/18 (100%)
 Frame = +2

Query: 2   SKAPKDVKIQGIWYAQVE 55
           +KAPKDVKIQG+WYAQ+E
Sbjct: 318 AKAPKDVKIQGVWYAQLE 335


>tr|A5JV93|A5JV93_9POAL Chloroplast oxygen-evolving enhancer protein
           1 OS=Leymus chinensis GN=OEE1 PE=2 SV=1
          Length = 328

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 15/18 (83%), Positives = 18/18 (100%)
 Frame = +2

Query: 2   SKAPKDVKIQGIWYAQVE 55
           +KAPKDVKIQG+WYAQ+E
Sbjct: 309 AKAPKDVKIQGVWYAQLE 326


>tr|Q84QE8|Q84QE8_TOBAC Oxygen evolving complex 33 kDa photosystem
           II protein OS=Nicotiana tabacum GN=PsbO PE=2 SV=1
          Length = 332

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +2

Query: 2   SKAPKDVKIQGIWYAQVE 55
           +K PKDVKIQGIWYAQ+E
Sbjct: 315 AKVPKDVKIQGIWYAQLE 332


>tr|Q58H58|Q58H58_NICBE Chloroplast photosynthetic oxygen-evolving
           protein 33 kDa subunit OS=Nicotiana benthamiana GN=psbO
           PE=2 SV=1
          Length = 332

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +2

Query: 2   SKAPKDVKIQGIWYAQVE 55
           +K PKDVKIQGIWYAQ+E
Sbjct: 315 AKVPKDVKIQGIWYAQLE 332


>tr|A9PK45|A9PK45_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 331

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +2

Query: 2   SKAPKDVKIQGIWYAQVE 55
           +K PKDVKIQGIWYAQ+E
Sbjct: 314 AKTPKDVKIQGIWYAQLE 331