DK943865
Clone id YMU02A01NGRL0004_D06
Library
Length 359
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0004_D06. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GATGGCAGGACTGCTGCCCATTTCGTGTTTGAGGAATTGTCAGGCTGTCTGGGGAATGAA
GCTTTAGGTTCAAAAGCATGGACGATGTGCTTACTTGCTATCAATCAGCCTTGGTTTAGT
TGATCTGGCTGAGCTCAATTTTGGGGGGTTTAAGTTAGAGACATTTGTTCTGAGGGAATA
CTGAATTTGCAAGTTTTGCAACTCTTCCAAGTTTTTGTCGAGGAGTATTGGGAGGCAATC
TTTATGCGCAACTAAATGAATTTTTATTGGGAGCTCAAGATAGGATGTTTGGTTTTGTCA
AGGAATATTGGGAACCAATCTTTATGCGACNAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P83636
Definition sp|P83636|MIH_ORCLI Molt-inhibiting hormone OS=Orconectes limosus
Align length 28
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943865|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_D06, 5'
(331 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P83636|MIH_ORCLI Molt-inhibiting hormone OS=Orconectes limosu... 31 2.2
sp|O36041|IF2G_SPIVO Eukaryotic translation initiation factor 2 ... 30 3.8
sp|Q03833|GIS1_YEAST Transcriptional activator/repressor GIS1 OS... 30 4.9
sp|A2AQW0|M3K15_MOUSE Mitogen-activated protein kinase kinase ki... 29 6.4
sp|Q8KBW7|Y1665_CHLTE UPF0082 protein CT1665 OS=Chlorobium tepid... 29 8.4

>sp|P83636|MIH_ORCLI Molt-inhibiting hormone OS=Orconectes limosus
PE=1 SV=2
Length = 106

Score = 30.8 bits (68), Expect = 2.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1

Query: 7 RTAAHFVFEELSGCLGNEALGSKAWTMC 90
+T A +VFEE G +GN AL K +C
Sbjct: 26 QTTARYVFEECPGVMGNRALHGKVTRVC 53


>sp|O36041|IF2G_SPIVO Eukaryotic translation initiation factor 2
subunit gamma (Fragment) OS=Spironucleus vortens PE=3
SV=1
Length = 210

Score = 30.0 bits (66), Expect = 3.8
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = -2

Query: 297 QNQTSYLELPIKIHLVAHKDCLPILLDKNLEELQNLQIQYSLRTNVSNLNPPK 139
Q Q +Y E+ +H ++ + +PI +QNL I Y L+ V + PP+
Sbjct: 150 QAQNNYQEIQAFVHGISDINVVPI------SAIQNLNIDYILKHLVETITPPR 196


>sp|Q03833|GIS1_YEAST Transcriptional activator/repressor GIS1
OS=Saccharomyces cerevisiae GN=GIS1 PE=1 SV=1
Length = 894

Score = 29.6 bits (65), Expect = 4.9
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = -2

Query: 225 LLDKNLEELQNLQIQYSLRTNVSNLNPPKLSSARSTKP 112
LL+ + +ELQNL+ + + N+N P+ SS RST P
Sbjct: 369 LLNHSSQELQNLEDNKNPLFSNINMNRPQSSSLRSTTP 406


>sp|A2AQW0|M3K15_MOUSE Mitogen-activated protein kinase kinase kinase
15 OS=Mus musculus GN=Map3k15 PE=3 SV=1
Length = 1331

Score = 29.3 bits (64), Expect = 6.4
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -2

Query: 246 HKDCLPILLDKNLEELQNLQIQYSLRTNVSNLNPP 142
+++ L ++LD+ +EL +LQ+QY N PP
Sbjct: 1223 YQNLLRLILDQKTQELYHLQLQYKSNGGTENPPPP 1257


>sp|Q8KBW7|Y1665_CHLTE UPF0082 protein CT1665 OS=Chlorobium tepidum
GN=CT1665 PE=3 SV=1
Length = 251

Score = 28.9 bits (63), Expect = 8.4
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -2

Query: 252 VAHKDCLPILLDKNLEELQNLQIQY-SLRTNVSNLNPPK 139
++ D + +LLD LEEL++ QY ++ T+V +L P K
Sbjct: 147 ISEDDLMELLLDAGLEELESDDEQYFTVLTDVKDLEPVK 185


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943865|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_D06, 5'
(331 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******