DK943884
Clone id YMU02A01NGRL0004_E11
Library
Length 498
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0004_E11. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GAGGATATTGTGTGTCTATGGACAAGCAGATGAGGAGGGAAAGCCACGTAGAGGATGTGT
ATCCATGGACAAGCGGATGAGGAGGGGTAAAAAGCCAGGCTGCGAATAAATTGAGACAGA
TTTCCATTGATGCCTTTACCATGGCCAGTGTTACCATCTCCCAAGCTGTTGTAAAGTTTT
GGGTGCACAGTTGCAGACCAGCTGGGGTTGCATCTTCTCTTTGTATCAATCCTGAGCATG
GGATCCTGCACTTTGACATAATTGTTGCTGCTGGAGGGATCGCACCATGAAGGTGGCGCT
TTCTAGTTTACTTCAACGATCGGGTGATATTCAATTTGAAGACCAAGCATAGATAAACAT
GGTTGGTAGTTTGTGATTGAAGTTCTTGATCGTTTTGCATCCACTTGTGCTACTCTTCTG
GCTTTGGCTGTAGAAAGTGACTGATCGTCATGGGGGTAAGCTTGTAAATTATGTGACAAT
AATCCCATTCAAATTCAT
■■Homology search results ■■ -
sp_hit_id O94380
Definition sp|O94380|GPI16_SCHPO GPI transamidase component PIG-T homolog OS=Schizosaccharomyces pombe
Align length 179
Score (bit) 34.7
E-value 0.25
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943884|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_E11, 5'
(498 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O94380|GPI16_SCHPO GPI transamidase component PIG-T homolog O... 35 0.25
sp|Q9MZS8|CATD_SHEEP Cathepsin D (Fragment) OS=Ovis aries GN=CTS... 32 1.2
sp|Q5VWM3|PRA18_HUMAN PRAME family member 18 OS=Homo sapiens GN=... 32 2.1
sp|A3QJZ6|PRA22_HUMAN PRAME family member 22 OS=Homo sapiens GN=... 31 2.8

>sp|O94380|GPI16_SCHPO GPI transamidase component PIG-T homolog
OS=Schizosaccharomyces pombe GN=SPBC1604.15 PE=2 SV=1
Length = 545

Score = 34.7 bits (78), Expect = 0.25
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 21/179 (11%)
Frame = -2

Query: 476 SHNLQAYPHDDQSLSTAKARRVAQ--VDAKRS--RTSITNYQP--------------CLS 351
S ++ YP ++QSL++ K + Q VD +R+ R T +QP CL
Sbjct: 217 SFSIDVYPSENQSLASVKMGIIIQAVVDVERNGRRKGKTTFQPPSEYCHDEDMDSLHCL- 275

Query: 350 MLGLQIEYHPIVEVN*KAPPSWCDPSSSNNYVKVQDPMLRIDTKRRCNPSWSATVHPKLY 171
M G E+H + ++ K P C SS+ + V V + +IDT + +A + +
Sbjct: 276 MSGYSTEHHTVDDLFHKVPKERCLLSSTFSDVFVSNGD-KIDT---FSLDEAANIQIPI- 330

Query: 170 NSLGDGNT---GHGKGINGNLSQFIRSLAFYPSSSACPWIHILYVAFPPHLLVHRHTIS 3
S D +T +GN + S + PSSS P + + FP + V+ HT++
Sbjct: 331 QSTSDNHTVTVDRSLSNDGNHWGSLSSTIYNPSSS--PRTIVYFEKFPWFVRVYLHTLT 387


>sp|Q9MZS8|CATD_SHEEP Cathepsin D (Fragment) OS=Ovis aries GN=CTSD
PE=1 SV=1
Length = 365

Score = 32.3 bits (72), Expect = 1.2
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = -3

Query: 298 RHLHGAIPPAATIMSKCRIPCSGLIQREDATPAGLQLCTQNFTTAWEMVTLAMVKASMEI 119
R LH AI I + IPC + T L+L +++T + E TL + +A +
Sbjct: 282 RELHKAIGAVPLIQGEYMIPCEKVSSLPQVT---LKLGGKDYTLSPEDYTLKVSQAGTTV 338

Query: 118 CLNLFAAWLFTPP 80
CL+ F PP
Sbjct: 339 CLSGFMGMDIPPP 351


>sp|Q5VWM3|PRA18_HUMAN PRAME family member 18 OS=Homo sapiens
GN=PRAMEF18 PE=2 SV=1
Length = 479

Score = 31.6 bits (70), Expect = 2.1
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = +3

Query: 117 QISIDAFTMASVTISQAVVKFWVHSCRPAGVASSLCINPEHGILHFDI----IVAAGGIA 284
++ ++AFT + + +V+ W C P G SL P+ ILH+ + + A +
Sbjct: 38 RLFVEAFTSRRCEVLKVMVQAWPFPCLPLG---SLMKTPDLEILHYVVDGIDCLLAQKVR 94

Query: 285 P*RWRFLV 308
P RW+ V
Sbjct: 95 PRRWKLQV 102


>sp|A3QJZ6|PRA22_HUMAN PRAME family member 22 OS=Homo sapiens
GN=PRAMEF22 PE=3 SV=2
Length = 479

Score = 31.2 bits (69), Expect = 2.8
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +3

Query: 126 IDAFTMASVTISQAVVKFWVHSCRPAGVASSLCINPEHGILHFDI----IVAAGGIAP*R 293
++AFT + + +V+ W C P G SL P+ ILH+ + + A + P R
Sbjct: 41 VEAFTSRRCEVLKVMVQAWPFPCLPLG---SLMKTPDLEILHYVVDGIDCLLAQKVRPRR 97

Query: 294 WRFLV 308
W+ V
Sbjct: 98 WKLQV 102


tr_hit_id A5EHY6
Definition tr|A5EHY6|A5EHY6_BRASB Non-ribosomal peptide synthase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
Align length 50
Score (bit) 36.2
E-value 0.88
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943884|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_E11, 5'
(498 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5EHY6|A5EHY6_BRASB Non-ribosomal peptide synthase OS=Bradyrh... 36 0.88
tr|A1L3M0|A1L3M0_XENLA LOC100037041 protein OS=Xenopus laevis GN... 33 5.7
tr|Q7RRD8|Q7RRD8_PLAYO Glucose-6-phosphate 1-dehydrogenase OS=Pl... 33 5.7
tr|B3T5T2|B3T5T2_9ZZZZ Putative uncharacterized protein OS=uncul... 33 7.5
tr|A8IFS5|A8IFS5_CHLRE Predicted protein OS=Chlamydomonas reinha... 33 9.8

>tr|A5EHY6|A5EHY6_BRASB Non-ribosomal peptide synthase
OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
GN=BBta_3701 PE=3 SV=1
Length = 3962

Score = 36.2 bits (82), Expect = 0.88
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -2

Query: 278 PSSSNNYVKVQDPMLRIDTKRRCNPSWSATVHPKLYNSLGDGNTGHGKGI 129
P + + + DPML D++ C+P+ A P LY + G+TG KG+
Sbjct: 3220 PQFTGEVIALDDPML--DSETACDPTREAVADPLLYIAYTSGSTGRPKGV 3267


>tr|A1L3M0|A1L3M0_XENLA LOC100037041 protein OS=Xenopus laevis
GN=cxorf57 PE=2 SV=1
Length = 839

Score = 33.5 bits (75), Expect = 5.7
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3

Query: 171 VKFWVHSCRPAGVASSLCINPEHGI-LHFDII 263
+KF H+C+ A + +LC N EHGI LH D++
Sbjct: 764 MKFLAHNCQKACASDNLCENIEHGISLHGDVL 795


>tr|Q7RRD8|Q7RRD8_PLAYO Glucose-6-phosphate 1-dehydrogenase
OS=Plasmodium yoelii yoelii GN=PY00793 PE=3 SV=1
Length = 949

Score = 33.5 bits (75), Expect = 5.7
Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 24/128 (18%)
Frame = -2

Query: 332 EYHPIVEVN*KAPPSWCDPSSSNNYVKVQDPMLRIDTKRRC-------NPSWSATVHPKL 174
E H V + P + + + +NN +P + D+ +RC N S +AT
Sbjct: 436 EKHKQVNSTSQFPNNHTNTNVTNNIDNGCEPPMPNDSPKRCPYSSSYSNTSGNATCPHSS 495

Query: 173 YNSLGDGNTGHGKGINGNLSQFIRSLAFYPSSSACPWI-----------------HILYV 45
++S+ NTG ++ S A +S CP+I +LY+
Sbjct: 496 HHSVKPSNTG---------CPYLSSQANTSDNSGCPYISHHINKSGNSGCPYTITRMLYL 546

Query: 44 AFPPHLLV 21
A PPH+ V
Sbjct: 547 ALPPHIFV 554


>tr|B3T5T2|B3T5T2_9ZZZZ Putative uncharacterized protein
OS=uncultured marine microorganism HF4000_ANIW141L21
GN=ALOHA_HF4000ANIW141L21ctg1g8 PE=4 SV=1
Length = 326

Score = 33.1 bits (74), Expect = 7.5
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3

Query: 3 GYCVSMDKQM--RRESHVEDVYPWTSG*GGVKSQAANKLRQISIDAFTMASVTISQAVVK 176
GY V + K + R ESH E P+ G + +A LR+ F MAS+T S+AV K
Sbjct: 203 GYEVEISKMVVSRMESHYEVQIPFRPLDSGGEFEAIENLRRTDTCDFVMASITNSKAVSK 262


>tr|A8IFS5|A8IFS5_CHLRE Predicted protein OS=Chlamydomonas reinhardtii
GN=CHLREDRAFT_188291 PE=4 SV=1
Length = 1485

Score = 32.7 bits (73), Expect = 9.8
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = -2

Query: 200 WSATVHPK-----LYNSLGDGNTGHGKGINGNLSQFIRSLAFYPSSSACPWIHILYVAFP 36
W++++H + LY DG++GH G +RS+ ++ + + + +++P
Sbjct: 1146 WNSSLHLRHDAQILYIEDADGSSGHSHGSLAGAFSSLRSMMRLGAADSGSALSLEAMSYP 1205

Query: 35 PHLLVHRHT 9
H L H HT
Sbjct: 1206 NHYLAHDHT 1214