DK943887
Clone id YMU02A01NGRL0004_E16
Library
Length 287
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0004_E16. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
CTTGCAGAATATTCCAAGGCATCCATCACACAACAAAATCCAAGCCAAAAAATATGGCAG
AAGCTTTGCAAGGATTTTCTAAGGAACTGAAGGCCTGCCAAAGAGTCAATTGTCCTTCGG
GTTATTTGTCCTTGTATTATACGAGATCAAAATTGTGAGCTCAGATTATTCATTTTTTTC
TGTGCTTCTTTACGGACAATACGATTAAGAAAAGGTGTTGCTTTNAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id A1BHB7
Definition sp|A1BHB7|KUP_CHLPD Probable potassium transport system protein kup OS=Chlorobium phaeobacteroides (strain DSM 266)
Align length 25
Score (bit) 28.9
E-value 8.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943887|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_E16, 5'
(225 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A1BHB7|KUP_CHLPD Probable potassium transport system protein ... 29 8.2

>sp|A1BHB7|KUP_CHLPD Probable potassium transport system protein kup
OS=Chlorobium phaeobacteroides (strain DSM 266) GN=kup
PE=3 SV=1
Length = 637

Score = 28.9 bits (63), Expect = 8.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2

Query: 2 LQNIPRHPSHNKIQAKKYGRSFARI 76
L+ +PR P+ K++ KKYG R+
Sbjct: 527 LERVPRVPNSKKVEIKKYGDGLCRV 551


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943887|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_E16, 5'
(225 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******