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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK943892
Clone id YMU02A01NGRL0004_E22
Library
Length 454
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0004_E22. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence 
GGATTGTTGGGATAATTTCGCTACTTTTCATCATATCATCAGTACCAGAAACCAAGGGAC
TAAGTCTGGAAGAGATTGAAGATAAGCTTTCGAAAGGTTGATGTTTTCTTGACAAGTACT
TTTGCTGGAGCTTGTCGTAGCGTCAAAGAAGAGAAGAGAACATGGTTCTCTTGGTCAAGA
CAATGCGTCTGGATAATCTACCCTTTGTGCCATTACACATGATCGATAATGCATTTGCAG
GTCTGCAAATGTGCAAAGTTGATACTTGATGTGTCTTTTGGGTTCGGATGATGGTACAAG
TCACCCTCTTGTGTGTGAAGCTATCTATAGCTGCAAGCTCCATCAAGATATTTGAAGTAA
CCTCCACAGAAATCTAAAGAAGCTTGGGATGTTGTAAGAATGAATTTCAAGCAATTGCAG
GATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q0WWW9
Definition sp|Q0WWW9|XYLL3_ARATH D-xylose-proton symporter-like 3 OS=Arabidopsis thaliana
Align length 30
Score (bit) 43.9
E-value 0.0003
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943892|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_E22, 5'
         (424 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q0WWW9|XYLL3_ARATH D-xylose-proton symporter-like 3 OS=Arabid...    44   3e-04
sp|Q9C757|INT2_ARATH Probable inositol transporter 2 OS=Arabidop...    38   0.014
sp|Q6AWX0|XYLL2_ARATH D-xylose-proton symporter-like 2 OS=Arabid...    38   0.019
sp|Q8L6Z8|XYLL1_ARATH D-xylose-proton symporter-like 1 OS=Arabid...    37   0.024
sp|Q9BE72|GTR12_MACFA Solute carrier family 2, facilitated gluco...    37   0.032
sp|Q8TD20|GTR12_HUMAN Solute carrier family 2, facilitated gluco...    37   0.032
sp|Q6GN01|GTR10_XENLA Solute carrier family 2, facilitated gluco...    37   0.041
sp|Q94CI6|EDL18_ARATH Sugar transporter ERD6-like 18 OS=Arabidop...    36   0.054
sp|Q0P4G6|GTR10_XENTR Solute carrier family 2, facilitated gluco...    36   0.070
sp|Q5J316|GTR12_BOVIN Solute carrier family 2, facilitated gluco...    35   0.092
sp|Q93Z80|EDL10_ARATH Sugar transporter ERD6-like 10 OS=Arabidop...    35   0.092
sp|O34718|IOLT_BACSU Major myo-inositol transporter iolT OS=Baci...    35   0.12 
sp|Q8BFW9|GTR12_MOUSE Solute carrier family 2, facilitated gluco...    35   0.16 
sp|Q32NG5|GTR12_XENLA Solute carrier family 2, facilitated gluco...    34   0.20 
sp|Q94CI7|EDL17_ARATH Sugar transporter ERD6-like 17 OS=Arabidop...    34   0.20 
sp|P46333|CSBC_BACSU Probable metabolite transport protein csbC ...    34   0.20 
sp|P32465|HXT1_YEAST Low-affinity glucose transporter HXT1 OS=Sa...    33   0.46 
sp|Q56ZZ7|PLST4_ARATH Plastidic glucose transporter 4 OS=Arabido...    33   0.60 
sp|Q4F7G0|ERDL2_ARATH Sugar transporter ERD6-like 2 OS=Arabidops...    33   0.60 
sp|Q94AF9|EDL11_ARATH Sugar transporter ERD6-like 11 OS=Arabidop...    32   0.78 
sp|P96710|ARAE_BACSU Arabinose-proton symporter OS=Bacillus subt...    32   0.78 
sp|Q9LNV3|STP2_ARATH Sugar transport protein 2 OS=Arabidopsis th...    32   1.0  
sp|P32466|HXT3_YEAST Low-affinity glucose transporter HXT3 OS=Sa...    32   1.0  
sp|Q9LTP6|EDL13_ARATH Putative sugar transporter ERD6-like 13 OS...    32   1.0  
sp|P54723|YFIG_BACSU Putative metabolite transport protein yfiG ...    32   1.3  
sp|P0AGF4|XYLE_ECOLI D-xylose-proton symporter OS=Escherichia co...    32   1.3  
sp|P0AGF5|XYLE_ECO57 D-xylose-proton symporter OS=Escherichia co...    32   1.3  
sp|P18631|RAG1_KLULA Low-affinity glucose transporter OS=Kluyver...    32   1.3  
sp|Q96QE2|MYCT_HUMAN Proton myo-inositol cotransporter OS=Homo s...    32   1.3  
sp|Q96290|MSSP1_ARATH Monosaccharide-sensing protein 1 OS=Arabid...    32   1.3  

>sp|Q0WWW9|XYLL3_ARATH D-xylose-proton symporter-like 3
           OS=Arabidopsis thaliana GN=At5g59250 PE=2 SV=2
          Length = 558

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 20/30 (66%), Positives = 25/30 (83%)
 Frame = +3

Query: 6   VGIISLLFIISSVPETKGLSLEEIEDKLSK 95
           + ++SLLF+I  VPETKGLSLEEIE K+ K
Sbjct: 529 IALVSLLFVILVVPETKGLSLEEIESKILK 558


>sp|Q9C757|INT2_ARATH Probable inositol transporter 2 OS=Arabidopsis
           thaliana GN=INT2 PE=2 SV=1
          Length = 580

 Score = 38.1 bits (87), Expect = 0.014
 Identities = 15/31 (48%), Positives = 24/31 (77%)
 Frame = +3

Query: 3   IVGIISLLFIISSVPETKGLSLEEIEDKLSK 95
           ++ +I+LLF++  VPETKG+ +EEIE  L +
Sbjct: 528 VISVIALLFVMVCVPETKGMPMEEIEKMLER 558


>sp|Q6AWX0|XYLL2_ARATH D-xylose-proton symporter-like 2
           OS=Arabidopsis thaliana GN=At5g17010 PE=1 SV=1
          Length = 503

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = +3

Query: 3   IVGIISLLFIISSVPETKGLSLEEIEDK 86
           ++ ++SL+FI   VPETKGL+LEEIE K
Sbjct: 474 VICVLSLVFIFFIVPETKGLTLEEIEAK 501


>sp|Q8L6Z8|XYLL1_ARATH D-xylose-proton symporter-like 1
           OS=Arabidopsis thaliana GN=At3g03090 PE=2 SV=1
          Length = 503

 Score = 37.4 bits (85), Expect = 0.024
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = +3

Query: 3   IVGIISLLFIISSVPETKGLSLEEIEDK 86
           ++ ++SL FI   VPETKGL+LEEIE K
Sbjct: 474 VICVVSLFFIYYIVPETKGLTLEEIEAK 501


>sp|Q9BE72|GTR12_MACFA Solute carrier family 2, facilitated glucose
           transporter member 12 OS=Macaca fascicularis GN=SLC2A12
           PE=2 SV=1
          Length = 621

 Score = 37.0 bits (84), Expect = 0.032
 Identities = 16/31 (51%), Positives = 24/31 (77%)
 Frame = +3

Query: 3   IVGIISLLFIISSVPETKGLSLEEIEDKLSK 95
           I+ + SLLF++  +PETKG SLE+I  +L+K
Sbjct: 540 IMSLASLLFVVMFIPETKGCSLEQISMELAK 570


>sp|Q8TD20|GTR12_HUMAN Solute carrier family 2, facilitated glucose
           transporter member 12 OS=Homo sapiens GN=SLC2A12 PE=2
           SV=1
          Length = 617

 Score = 37.0 bits (84), Expect = 0.032
 Identities = 16/31 (51%), Positives = 24/31 (77%)
 Frame = +3

Query: 3   IVGIISLLFIISSVPETKGLSLEEIEDKLSK 95
           I+ + SLLF++  +PETKG SLE+I  +L+K
Sbjct: 536 IMSLASLLFVVMFIPETKGCSLEQISMELAK 566


>sp|Q6GN01|GTR10_XENLA Solute carrier family 2, facilitated glucose
           transporter member 10 OS=Xenopus laevis GN=slc2a10 PE=2
           SV=1
          Length = 553

 Score = 36.6 bits (83), Expect = 0.041
 Identities = 16/29 (55%), Positives = 23/29 (79%)
 Frame = +3

Query: 6   VGIISLLFIISSVPETKGLSLEEIEDKLS 92
           VG++++ FI   +PETKG SLEEI+ +LS
Sbjct: 492 VGLLAIAFIYFFIPETKGQSLEEIDQQLS 520


>sp|Q94CI6|EDL18_ARATH Sugar transporter ERD6-like 18 OS=Arabidopsis
           thaliana GN=SFP2 PE=2 SV=1
          Length = 478

 Score = 36.2 bits (82), Expect = 0.054
 Identities = 19/28 (67%), Positives = 22/28 (78%)
 Frame = +3

Query: 6   VGIISLLFIISSVPETKGLSLEEIEDKL 89
           VG ++LLFI   VPETKGLSLEEI+  L
Sbjct: 441 VGGLALLFIWLLVPETKGLSLEEIQASL 468


>sp|Q0P4G6|GTR10_XENTR Solute carrier family 2, facilitated glucose
           transporter member 10 OS=Xenopus tropicalis GN=slc2a10
           PE=2 SV=1
          Length = 555

 Score = 35.8 bits (81), Expect = 0.070
 Identities = 15/30 (50%), Positives = 23/30 (76%)
 Frame = +3

Query: 3   IVGIISLLFIISSVPETKGLSLEEIEDKLS 92
           +VG++++ FI   +PETKG SLEEI+ + S
Sbjct: 493 VVGLLAIAFIYFFIPETKGQSLEEIDKQFS 522


>sp|Q5J316|GTR12_BOVIN Solute carrier family 2, facilitated glucose
           transporter member 12 OS=Bos taurus GN=SLC2A12 PE=1 SV=1
          Length = 621

 Score = 35.4 bits (80), Expect = 0.092
 Identities = 15/31 (48%), Positives = 24/31 (77%)
 Frame = +3

Query: 3   IVGIISLLFIISSVPETKGLSLEEIEDKLSK 95
           ++ + SL+F+I  +PETKG SLE+I  +L+K
Sbjct: 540 VMSLASLVFVIVFIPETKGCSLEQISVELAK 570
tr_hit_id Q07A14
Definition tr|Q07A14|Q07A14_NICLS Putative sugar transporter OS=Nicotiana langsdorffii x Nicotiana sanderae
Align length 30
Score (bit) 46.6
E-value 0.0006
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943892|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_E22, 5'
         (424 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q07A14|Q07A14_NICLS Putative sugar transporter OS=Nicotiana l...    47   6e-04
tr|A7NYV4|A7NYV4_VITVI Chromosome chr6 scaffold_3, whole genome ...    45   0.002
tr|A9NWB2|A9NWB2_PICSI Putative uncharacterized protein OS=Picea...    45   0.002
tr|B4FYX8|B4FYX8_MAIZE Putative uncharacterized protein OS=Zea m...    44   0.004
tr|Q852B0|Q852B0_ORYSJ Putative sugar transporter protein OS=Ory...    43   0.009
tr|Q10BC6|Q10BC6_ORYSJ Sugar transporter family protein, putativ...    43   0.009
tr|Q0DM84|Q0DM84_ORYSJ Os03g0823100 protein (Fragment) OS=Oryza ...    43   0.009
tr|B8AMC6|B8AMC6_ORYSI Putative uncharacterized protein OS=Oryza...    43   0.009
tr|A3AP68|A3AP68_ORYSJ Putative uncharacterized protein OS=Oryza...    43   0.009
tr|Q83EH4|Q83EH4_COXBU D-xylose-proton symporter OS=Coxiella bur...    42   0.012
tr|B6J5X9|B6J5X9_COXB1 D-xylose-proton symporter OS=Coxiella bur...    42   0.012
tr|B6J1W5|B6J1W5_COXB2 D-xylose-proton symporter OS=Coxiella bur...    42   0.012
tr|A9NBH8|A9NBH8_COXBR D-xylose-proton symporter OS=Coxiella bur...    42   0.012
tr|A9KGL9|A9KGL9_COXBN D-xylose-proton symporter OS=Coxiella bur...    42   0.012
tr|A9ZHM5|A9ZHM5_COXBU D-xylose-proton symporter OS=Coxiella bur...    42   0.012
tr|A7PBC8|A7PBC8_VITVI Chromosome chr16 scaffold_10, whole genom...    42   0.012
tr|A5BV27|A5BV27_VITVI Putative uncharacterized protein OS=Vitis...    42   0.012
tr|A9S285|A9S285_PHYPA Predicted protein OS=Physcomitrella paten...    41   0.026
tr|Q0SH01|Q0SH01_RHOSR Sugar transporter, MFS superfamily protei...    40   0.044
tr|A9PFB9|A9PFB9_POPTR Putative uncharacterized protein OS=Popul...    40   0.044
tr|Q8NTX0|Q8NTX0_CORGL Permeases of the major facilitator superf...    39   0.098
tr|A4QAH8|A4QAH8_CORGB Putative uncharacterized protein OS=Coryn...    39   0.098
tr|A1R4I6|A1R4I6_ARTAT Putative sugar MFS transporter OS=Arthrob...    39   0.098
tr|A9ZSY3|A9ZSY3_BOMMO Trehalose transporter BmTRET1 OS=Bombyx m...    39   0.098
tr|A9T3E1|A9T3E1_PHYPA Predicted protein (Fragment) OS=Physcomit...    39   0.13 
tr|A4AMQ8|A4AMQ8_9FLAO Xylose transporter OS=Flavobacteriales ba...    39   0.17 
tr|Q2HSP6|Q2HSP6_MEDTR General substrate transporter OS=Medicago...    38   0.28 
tr|Q49ZU7|Q49ZU7_STAS1 Putative permease of the major facilitato...    37   0.37 
tr|Q0S9U7|Q0S9U7_RHOSR Sugar transporter, MFS superfamily protei...    37   0.37 
tr|A9GZH1|A9GZH1_GLUDA Putative sugar transporter protein OS=Glu...    37   0.37 

>tr|Q07A14|Q07A14_NICLS Putative sugar transporter OS=Nicotiana
           langsdorffii x Nicotiana sanderae PE=2 SV=1
          Length = 552

 Score = 46.6 bits (109), Expect = 6e-04
 Identities = 20/30 (66%), Positives = 27/30 (90%)
 Frame = +3

Query: 6   VGIISLLFIISSVPETKGLSLEEIEDKLSK 95
           + ++SLLF+++SVPETKGLSLEEIE K+ K
Sbjct: 523 IALLSLLFVVTSVPETKGLSLEEIESKILK 552


>tr|A7NYV4|A7NYV4_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024269001
           PE=3 SV=1
          Length = 561

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 21/31 (67%), Positives = 26/31 (83%)
 Frame = +3

Query: 3   IVGIISLLFIISSVPETKGLSLEEIEDKLSK 95
           I+ ++SLLF+I  VPETKGLSLEEIE K+ K
Sbjct: 531 IIALLSLLFVIVYVPETKGLSLEEIESKILK 561


>tr|A9NWB2|A9NWB2_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 521

 Score = 44.7 bits (104), Expect = 0.002
 Identities = 20/31 (64%), Positives = 26/31 (83%)
 Frame = +3

Query: 3   IVGIISLLFIISSVPETKGLSLEEIEDKLSK 95
           ++ ++SLLF+I  VPETKGLSLEEIE K+ K
Sbjct: 491 VIALLSLLFVIFYVPETKGLSLEEIESKILK 521


>tr|B4FYX8|B4FYX8_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 148

 Score = 43.9 bits (102), Expect = 0.004
 Identities = 19/31 (61%), Positives = 26/31 (83%)
 Frame = +3

Query: 3   IVGIISLLFIISSVPETKGLSLEEIEDKLSK 95
           ++ ++SL+F+I  VPETKGLSLEEIE K+ K
Sbjct: 118 VIAVLSLVFVILVVPETKGLSLEEIESKILK 148


>tr|Q852B0|Q852B0_ORYSJ Putative sugar transporter protein OS=Oryza
           sativa subsp. japonica GN=OSJNBb0081B07.15 PE=3 SV=1
          Length = 525

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 19/30 (63%), Positives = 25/30 (83%)
 Frame = +3

Query: 6   VGIISLLFIISSVPETKGLSLEEIEDKLSK 95
           + ++SL+F+I  VPETKGL+LEEIE KL K
Sbjct: 496 ISLLSLVFVILKVPETKGLTLEEIESKLLK 525


>tr|Q10BC6|Q10BC6_ORYSJ Sugar transporter family protein, putative,
           expressed OS=Oryza sativa subsp. japonica
           GN=LOC_Os03g60820 PE=3 SV=1
          Length = 545

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 19/30 (63%), Positives = 25/30 (83%)
 Frame = +3

Query: 6   VGIISLLFIISSVPETKGLSLEEIEDKLSK 95
           + ++SL+F+I  VPETKGL+LEEIE KL K
Sbjct: 516 ISLLSLVFVILKVPETKGLTLEEIESKLLK 545


>tr|Q0DM84|Q0DM84_ORYSJ Os03g0823100 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os03g0823100 PE=4 SV=1
          Length = 303

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 19/30 (63%), Positives = 25/30 (83%)
 Frame = +3

Query: 6   VGIISLLFIISSVPETKGLSLEEIEDKLSK 95
           + ++SL+F+I  VPETKGL+LEEIE KL K
Sbjct: 274 ISLLSLVFVILKVPETKGLTLEEIESKLLK 303


>tr|B8AMC6|B8AMC6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_14118 PE=4 SV=1
          Length = 579

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 19/30 (63%), Positives = 25/30 (83%)
 Frame = +3

Query: 6   VGIISLLFIISSVPETKGLSLEEIEDKLSK 95
           + ++SL+F+I  VPETKGL+LEEIE KL K
Sbjct: 550 ISLLSLVFVILKVPETKGLTLEEIESKLLK 579


>tr|A3AP68|A3AP68_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_012590 PE=4 SV=1
          Length = 454

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 19/30 (63%), Positives = 25/30 (83%)
 Frame = +3

Query: 6   VGIISLLFIISSVPETKGLSLEEIEDKLSK 95
           + ++SL+F+I  VPETKGL+LEEIE KL K
Sbjct: 425 ISLLSLVFVILKVPETKGLTLEEIESKLLK 454


>tr|Q83EH4|Q83EH4_COXBU D-xylose-proton symporter OS=Coxiella
           burnetii GN=CBU_0347 PE=3 SV=2
          Length = 463

 Score = 42.4 bits (98), Expect = 0.012
 Identities = 18/32 (56%), Positives = 27/32 (84%)
 Frame = +3

Query: 3   IVGIISLLFIISSVPETKGLSLEEIEDKLSKG 98
           I+ +I+L+FI +SVPETKG++LE+IE+ L  G
Sbjct: 424 IISVITLIFIYTSVPETKGVTLEQIEENLYAG 455