NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK943896
Clone id YMU02A01NGRL0004_F03
Library
Length 592
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0004_F03. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
ACACACAGCATACTCTCTCTAGCCCACTAGATATTTTGCTTCTTCTGCTTATACGTTTCT
TCTGGTGGGCGTGGTAAGGGTTAGAGCTAATTGCCTCGCGTTTCTGTGTTCCCATCCGCG
ATCCATCTCTTCTGCAAGGTTTACATTTTGGAGAAATGGCGTCCTTGACAGAGAAGGCGA
CCCACATGAGCAAACCCATGATGGGCTCCGGGCAACTAGCCTCTCGGCACTTGGTGAAGA
GGACCGTGGCTAGCTCACTCGGAACAGGCTTACGCAGAGGTATGGGTCTTCCCAAGCTGG
ACATGACCTCACCTAGCAATGGCGCGGCGGCTCTCAGGTCGCATTCCTTTGGAAAGTCTA
TCATGTCAGCGGACAGCCCTTTTGCTCCTTCCCCCAAGTCAAGGGTTCCCCTTTCCCCTG
TCTGTATGGCTGCAGCAGCAGATGCTGGCGGTAGCGACGCCTCTCCGAGCGTGTCTACCT
CATCTGAAGGATTCCTTGCGAAGTATCCTGCATTGGTGACTGGATTCTTCTTCTTCATGT
GGTACTTCCTCAATGTGATCTTCAACATTTTGAACAAGAAGATTTACAACTA
■■Homology search results ■■ -
sp_hit_id P49133
Definition sp|P49133|TPT_MAIZE Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays
Align length 36
Score (bit) 75.1
E-value 2.0e-13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943896|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_F03, 5'
         (592 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P49133|TPT_MAIZE Triose phosphate/phosphate translocator, chl...    75   2e-13
sp|P49132|TPT_FLATR Triose phosphate/phosphate translocator, chl...    74   5e-13
sp|P49131|TPT_FLAPR Triose phosphate/phosphate translocator, chl...    72   2e-12
sp|P11869|TPT_SPIOL Triose phosphate/phosphate translocator, chl...    72   3e-12
sp|P21727|TPT_PEA Triose phosphate/phosphate translocator, chlor...    69   2e-11
sp|P52177|TPT1_BRAOB Triose phosphate/phosphate translocator, ch...    64   7e-10
sp|P29463|TPT_SOLTU Triose phosphate/phosphate translocator, chl...    59   2e-08
sp|P52178|TPT2_BRAOB Triose phosphate/phosphate translocator, no...    36   0.13 
sp|Q94B38|GPT2_ARATH Glucose-6-phosphate/phosphate translocator ...    35   0.21 
sp|Q9M5A9|GPT1_ARATH Glucose-6-phosphate/phosphate translocator ...    35   0.21 
sp|A1S3Y5|ACPS_SHEAM Holo-[acyl-carrier-protein] synthase OS=She...    35   0.28 
sp|P59475|ACPS_BUCBP Holo-[acyl-carrier-protein] synthase OS=Buc...    34   0.62 
sp|A5FVX4|ACPS_ACICJ Holo-[acyl-carrier-protein] synthase OS=Aci...    34   0.62 
sp|Q33568|CYB_TRYBO Cytochrome b OS=Trypanoplasma borreli GN=MT-...    33   0.81 
sp|Q6P4T0|ATG2A_MOUSE Autophagy-related protein 2 homolog A OS=M...    33   0.81 
sp|A8FSE0|ACPS_SHESH Holo-[acyl-carrier-protein] synthase OS=She...    33   0.81 
sp|A3QBT1|ACPS_SHELP Holo-[acyl-carrier-protein] synthase OS=She...    33   0.81 
sp|B0TIW1|ACPS_SHEHH Holo-[acyl-carrier-protein] synthase OS=She...    33   0.81 
sp|Q2NCF7|ACPS_ERYLH Holo-[acyl-carrier-protein] synthase OS=Ery...    33   0.81 
sp|Q1GT99|ACPS_SPHAL Holo-[acyl-carrier-protein] synthase OS=Sph...    33   1.1  
sp|Q07Z00|ACPS_SHEFN Holo-[acyl-carrier-protein] synthase OS=She...    33   1.1  
sp|A8H1D1|ACPS_SHEPA Holo-[acyl-carrier-protein] synthase OS=She...    33   1.4  
sp|Q7N1X9|ACPS_PHOLL Holo-[acyl-carrier-protein] synthase OS=Pho...    33   1.4  
sp|Q24751|ATPB_DROVI ATP synthase subunit beta, mitochondrial (F...    32   1.8  
sp|Q12KI5|ACPS_SHEDO Holo-[acyl-carrier-protein] synthase OS=She...    32   2.4  
sp|Q6P4S8|INT1_MOUSE Integrator complex subunit 1 OS=Mus musculu...    32   2.4  
sp|Q54K95|ATTY_DICDI Tyrosine aminotransferase OS=Dictyostelium ...    32   3.1  
sp|Q2NS17|ACPS_SODGM Holo-[acyl-carrier-protein] synthase OS=Sod...    32   3.1  
sp|A6TCH7|ACPS_KLEP7 Holo-[acyl-carrier-protein] synthase OS=Kle...    32   3.1  
sp|Q869N2|PAKB_DICDI Serine/threonine-protein kinase pakB OS=Dic...    31   4.0  

>sp|P49133|TPT_MAIZE Triose phosphate/phosphate translocator,
           chloroplastic OS=Zea mays GN=TPT PE=1 SV=1
          Length = 409

 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 34/36 (94%), Positives = 34/36 (94%)
 Frame = +3

Query: 483 SEGFLAKYPALVTGFFFFMWYFLNVIFNILNKKIYN 590
           S GFL KYPALVTGFFFFMWYFLNVIFNILNKKIYN
Sbjct: 96  SVGFLEKYPALVTGFFFFMWYFLNVIFNILNKKIYN 131


>sp|P49132|TPT_FLATR Triose phosphate/phosphate translocator,
           chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1
          Length = 407

 Score = 73.9 bits (180), Expect = 5e-13
 Identities = 33/34 (97%), Positives = 33/34 (97%)
 Frame = +3

Query: 489 GFLAKYPALVTGFFFFMWYFLNVIFNILNKKIYN 590
           GFLAKYP LVTGFFFFMWYFLNVIFNILNKKIYN
Sbjct: 95  GFLAKYPFLVTGFFFFMWYFLNVIFNILNKKIYN 128


>sp|P49131|TPT_FLAPR Triose phosphate/phosphate translocator,
           chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1
          Length = 408

 Score = 72.4 bits (176), Expect = 2e-12
 Identities = 32/34 (94%), Positives = 32/34 (94%)
 Frame = +3

Query: 489 GFLAKYPALVTGFFFFMWYFLNVIFNILNKKIYN 590
           GF AKYP LVTGFFFFMWYFLNVIFNILNKKIYN
Sbjct: 96  GFFAKYPFLVTGFFFFMWYFLNVIFNILNKKIYN 129


>sp|P11869|TPT_SPIOL Triose phosphate/phosphate translocator,
           chloroplastic OS=Spinacia oleracea PE=1 SV=1
          Length = 404

 Score = 71.6 bits (174), Expect = 3e-12
 Identities = 33/41 (80%), Positives = 34/41 (82%)
 Frame = +3

Query: 468 SVSTSSEGFLAKYPALVTGFFFFMWYFLNVIFNILNKKIYN 590
           S   +  GFL KYPALVTG FFFMWYFLNVIFNILNKKIYN
Sbjct: 85  SSGEAKTGFLEKYPALVTGSFFFMWYFLNVIFNILNKKIYN 125


>sp|P21727|TPT_PEA Triose phosphate/phosphate translocator,
           chloroplastic OS=Pisum sativum PE=1 SV=1
          Length = 402

 Score = 68.6 bits (166), Expect = 2e-11
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = +3

Query: 489 GFLAKYPALVTGFFFFMWYFLNVIFNILNKKIYN 590
           GF ++YPAL TGFFFF WYFLNVIFNILNKKIYN
Sbjct: 90  GFFSRYPALTTGFFFFTWYFLNVIFNILNKKIYN 123


>sp|P52177|TPT1_BRAOB Triose phosphate/phosphate translocator,
           chloroplastic OS=Brassica oleracea var. botrytis GN=TPT
           PE=2 SV=1
          Length = 407

 Score = 63.5 bits (153), Expect = 7e-10
 Identities = 29/41 (70%), Positives = 30/41 (73%)
 Frame = +3

Query: 468 SVSTSSEGFLAKYPALVTGFFFFMWYFLNVIFNILNKKIYN 590
           S   +  GFL KYP LVTG    MWYFLNVIFNILNKKIYN
Sbjct: 88  SAGETKVGFLGKYPWLVTGILLLMWYFLNVIFNILNKKIYN 128


>sp|P29463|TPT_SOLTU Triose phosphate/phosphate translocator,
           chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1
          Length = 414

 Score = 58.9 bits (141), Expect = 2e-08
 Identities = 28/34 (82%), Positives = 28/34 (82%)
 Frame = +3

Query: 489 GFLAKYPALVTGFFFFMWYFLNVIFNILNKKIYN 590
           GF  K   L TGFFFFMWYFLNVIFNILNKKIYN
Sbjct: 103 GFFNK-ATLTTGFFFFMWYFLNVIFNILNKKIYN 135


>sp|P52178|TPT2_BRAOB Triose phosphate/phosphate translocator,
           non-green plastid, chloroplastic OS=Brassica oleracea
           var. botrytis GN=NGTPT PE=2 SV=1
          Length = 402

 Score = 36.2 bits (82), Expect = 0.13
 Identities = 34/132 (25%), Positives = 50/132 (37%)
 Frame = +3

Query: 189 SKPMMGSGQLASRHLVKRTVASSLGTGLRRGMGLPKLDMTSPSNGAAALRSHSFGKSIMS 368
           S P++  G+L+ RH V  T +S+L       + +P L   S                + S
Sbjct: 12  SLPLLKPGRLSLRHPV--TASSNLSVSPPNVVSVPPLPRRS--------------WRLAS 55

Query: 369 ADSPFAPSPKSRVPLSPVCMXXXXXXXXXXXXPSVSTSSEGFLAKYPALVTGFFFFMWYF 548
           +DSP     ++   L  V               +V    EG       L  G  F MWY 
Sbjct: 56  SDSPL----RAWSGLPSVSSPSLDTNRFKTAATAVPEEGEGSGKMTKVLELGLLFAMWYL 111

Query: 549 LNVIFNILNKKI 584
            N+ FNI NK++
Sbjct: 112 FNIYFNIYNKQV 123


>sp|Q94B38|GPT2_ARATH Glucose-6-phosphate/phosphate translocator 2,
           chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1
          Length = 388

 Score = 35.4 bits (80), Expect = 0.21
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +3

Query: 513 LVTGFFFFMWYFLNVIFNILNKKIYN 590
           L  G +F  W+ LNV+FNI NKK+ N
Sbjct: 95  LKIGIYFATWWALNVVFNIYNKKVLN 120


>sp|Q9M5A9|GPT1_ARATH Glucose-6-phosphate/phosphate translocator 1,
           chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1
          Length = 388

 Score = 35.4 bits (80), Expect = 0.21
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +3

Query: 513 LVTGFFFFMWYFLNVIFNILNKKIYN 590
           L  G +F  W+ LNV+FNI NKK+ N
Sbjct: 95  LKIGIYFATWWALNVVFNIYNKKVLN 120
tr_hit_id Q9FTT3
Definition tr|Q9FTT3|Q9FTT3_ORYSJ Putative triose phosphate/phosphate translocator (Os01g0239200 protein) OS=Oryza sativa subsp. japonica
Align length 46
Score (bit) 77.0
E-value 7.0e-13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943896|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_F03, 5'
         (592 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9FTT3|Q9FTT3_ORYSJ Putative triose phosphate/phosphate trans...    77   7e-13
tr|Q9ARH5|Q9ARH5_ORYSA Triose phosphate/phosphate translocator O...    77   7e-13
tr|A2ZR52|A2ZR52_ORYSJ Putative uncharacterized protein OS=Oryza...    77   7e-13
tr|Q9MSB6|Q9MSB6_MESCR Triose phosphate/phosphate translocator O...    75   3e-12
tr|A9U2X2|A9U2X2_PHYPA Predicted protein OS=Physcomitrella paten...    74   5e-12
tr|A7QPR8|A7QPR8_VITVI Chromosome chr10 scaffold_138, whole geno...    74   5e-12
tr|A5B912|A5B912_VITVI Putative uncharacterized protein OS=Vitis...    74   5e-12
tr|B8ABD8|B8ABD8_ORYSI Putative uncharacterized protein OS=Oryza...    74   6e-12
tr|Q9ZSR7|Q9ZSR7_ARATH Phosphate/triose-phosphate translocator (...    74   8e-12
tr|Q9FNL1|Q9FNL1_ARATH Phosphate/triose-phosphate translocator O...    74   8e-12
tr|Q93ZM3|Q93ZM3_ARATH AT5g46110/MCL19_16 OS=Arabidopsis thalian...    74   8e-12
tr|Q8LB04|Q8LB04_ARATH Phosphate/triose-phosphate translocator O...    74   8e-12
tr|Q2V313|Q2V313_ARATH Uncharacterized protein At5g46110.3 OS=Ar...    74   8e-12
tr|Q9ATY2|Q9ATY2_WHEAT Triose phosphate translocator OS=Triticum...    73   1e-11
tr|A9U2X6|A9U2X6_PHYPA Predicted protein OS=Physcomitrella paten...    71   5e-11
tr|B7FHQ9|B7FHQ9_MEDTR Putative uncharacterized protein OS=Medic...    70   1e-10
tr|A7P2G6|A7P2G6_VITVI Chromosome chr1 scaffold_5, whole genome ...    70   1e-10
tr|B6T5Y2|B6T5Y2_MAIZE Triose phosphate/phosphate translocator O...    69   2e-10
tr|B4FWC0|B4FWC0_MAIZE Putative uncharacterized protein OS=Zea m...    69   2e-10
tr|Q60EU8|Q60EU8_ORYSJ Os05g0241200 protein OS=Oryza sativa subs...    68   4e-10
tr|A3B1R0|A3B1R0_ORYSJ Putative uncharacterized protein OS=Oryza...    68   4e-10
tr|A2Y286|A2Y286_ORYSI Putative uncharacterized protein OS=Oryza...    68   4e-10
tr|A9NVP1|A9NVP1_PICSI Putative uncharacterized protein OS=Picea...    67   1e-09
tr|Q40568|Q40568_TOBAC Phosphate translocator OS=Nicotiana tabac...    61   5e-08
tr|A4S7N4|A4S7N4_OSTLU DMT family transporter: triose phosphate/...    49   3e-04
tr|Q84Y92|Q84Y92_BRARP Putative phosphate/triose-phosphate trans...    43   0.012
tr|B4G0N7|B4G0N7_MAIZE Putative uncharacterized protein OS=Zea m...    43   0.012
tr|B7G197|B7G197_PHATR Predicted protein OS=Phaeodactylum tricor...    42   0.034
tr|B5AJT1|B5AJT1_GALSU Putative hexose phosphate translocator OS...    42   0.034
tr|Q4Y1U3|Q4Y1U3_PLACH Triose or hexose phosphate / phosphate tr...    40   0.075

>tr|Q9FTT3|Q9FTT3_ORYSJ Putative triose phosphate/phosphate
           translocator (Os01g0239200 protein) OS=Oryza sativa
           subsp. japonica GN=OSJNBa0086P08.33 PE=4 SV=1
          Length = 417

 Score = 77.0 bits (188), Expect = 7e-13
 Identities = 36/46 (78%), Positives = 39/46 (84%), Gaps = 4/46 (8%)
 Frame = +3

Query: 465 PSVSTSSE----GFLAKYPALVTGFFFFMWYFLNVIFNILNKKIYN 590
           P+ +TS E    GFL KYPAL+TGFFFFMWYFLNVIFNILNKKIYN
Sbjct: 94  PAAATSGEAKPAGFLEKYPALITGFFFFMWYFLNVIFNILNKKIYN 139


>tr|Q9ARH5|Q9ARH5_ORYSA Triose phosphate/phosphate translocator
           OS=Oryza sativa PE=2 SV=1
          Length = 417

 Score = 77.0 bits (188), Expect = 7e-13
 Identities = 36/46 (78%), Positives = 39/46 (84%), Gaps = 4/46 (8%)
 Frame = +3

Query: 465 PSVSTSSE----GFLAKYPALVTGFFFFMWYFLNVIFNILNKKIYN 590
           P+ +TS E    GFL KYPAL+TGFFFFMWYFLNVIFNILNKKIYN
Sbjct: 94  PAAATSGEAKPAGFLEKYPALITGFFFFMWYFLNVIFNILNKKIYN 139


>tr|A2ZR52|A2ZR52_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_001024 PE=4 SV=1
          Length = 277

 Score = 77.0 bits (188), Expect = 7e-13
 Identities = 36/46 (78%), Positives = 39/46 (84%), Gaps = 4/46 (8%)
 Frame = +3

Query: 465 PSVSTSSE----GFLAKYPALVTGFFFFMWYFLNVIFNILNKKIYN 590
           P+ +TS E    GFL KYPAL+TGFFFFMWYFLNVIFNILNKKIYN
Sbjct: 59  PAAATSGEAKPAGFLEKYPALITGFFFFMWYFLNVIFNILNKKIYN 104


>tr|Q9MSB6|Q9MSB6_MESCR Triose phosphate/phosphate translocator
           OS=Mesembryanthemum crystallinum GN=TPT PE=2 SV=1
          Length = 404

 Score = 75.1 bits (183), Expect = 3e-12
 Identities = 34/41 (82%), Positives = 35/41 (85%)
 Frame = +3

Query: 468 SVSTSSEGFLAKYPALVTGFFFFMWYFLNVIFNILNKKIYN 590
           S   +  GFL KYPALVTGFFFFMWYFLNVIFNILNKKIYN
Sbjct: 85  SAGEAKVGFLQKYPALVTGFFFFMWYFLNVIFNILNKKIYN 125


>tr|A9U2X2|A9U2X2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_227804 PE=4 SV=1
          Length = 440

 Score = 74.3 bits (181), Expect = 5e-12
 Identities = 32/36 (88%), Positives = 35/36 (97%)
 Frame = +3

Query: 483 SEGFLAKYPALVTGFFFFMWYFLNVIFNILNKKIYN 590
           ++GFLAKYPALVTGFFFF WYFLNVIFNI+NKKIYN
Sbjct: 126 AQGFLAKYPALVTGFFFFAWYFLNVIFNIMNKKIYN 161


>tr|A7QPR8|A7QPR8_VITVI Chromosome chr10 scaffold_138, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00003047001
           PE=4 SV=1
          Length = 406

 Score = 74.3 bits (181), Expect = 5e-12
 Identities = 34/41 (82%), Positives = 35/41 (85%)
 Frame = +3

Query: 468 SVSTSSEGFLAKYPALVTGFFFFMWYFLNVIFNILNKKIYN 590
           S   +  GFL KYPALVTGFFFFMWYFLNVIFNILNKKIYN
Sbjct: 87  SAGDAKIGFLDKYPALVTGFFFFMWYFLNVIFNILNKKIYN 127


>tr|A5B912|A5B912_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_028555 PE=4 SV=1
          Length = 443

 Score = 74.3 bits (181), Expect = 5e-12
 Identities = 34/41 (82%), Positives = 35/41 (85%)
 Frame = +3

Query: 468 SVSTSSEGFLAKYPALVTGFFFFMWYFLNVIFNILNKKIYN 590
           S   +  GFL KYPALVTGFFFFMWYFLNVIFNILNKKIYN
Sbjct: 87  SAGDAKIGFLDKYPALVTGFFFFMWYFLNVIFNILNKKIYN 127


>tr|B8ABD8|B8ABD8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_01091 PE=4 SV=1
          Length = 348

 Score = 73.9 bits (180), Expect = 6e-12
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = +3

Query: 489 GFLAKYPALVTGFFFFMWYFLNVIFNILNKKIYN 590
           GFL KYPAL+TGFFFFMWYFLNVIFNILNKKIYN
Sbjct: 37  GFLEKYPALITGFFFFMWYFLNVIFNILNKKIYN 70


>tr|Q9ZSR7|Q9ZSR7_ARATH Phosphate/triose-phosphate translocator
           (At5g46110/MCL19_16) OS=Arabidopsis thaliana
           GN=At5g46110 PE=2 SV=1
          Length = 410

 Score = 73.6 bits (179), Expect = 8e-12
 Identities = 33/34 (97%), Positives = 33/34 (97%)
 Frame = +3

Query: 489 GFLAKYPALVTGFFFFMWYFLNVIFNILNKKIYN 590
           GFLAKYP LVTGFFFFMWYFLNVIFNILNKKIYN
Sbjct: 98  GFLAKYPWLVTGFFFFMWYFLNVIFNILNKKIYN 131


>tr|Q9FNL1|Q9FNL1_ARATH Phosphate/triose-phosphate translocator
           OS=Arabidopsis thaliana PE=4 SV=1
          Length = 426

 Score = 73.6 bits (179), Expect = 8e-12
 Identities = 33/34 (97%), Positives = 33/34 (97%)
 Frame = +3

Query: 489 GFLAKYPALVTGFFFFMWYFLNVIFNILNKKIYN 590
           GFLAKYP LVTGFFFFMWYFLNVIFNILNKKIYN
Sbjct: 98  GFLAKYPWLVTGFFFFMWYFLNVIFNILNKKIYN 131