BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943909|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_F20, 5'
         (337 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q91WC3|ACSL6_MOUSE Long-chain-fatty-acid--CoA ligase 6 OS=Mus...    30   4.9  
sp|Q89VX9|GLND_BRAJA [Protein-PII] uridylyltransferase OS=Bradyr...    29   8.4  
sp|Q21106|VPRBP_CAEEL VPRBP-like protein OS=Caenorhabditis elega...    29   8.4  

>sp|Q91WC3|ACSL6_MOUSE Long-chain-fatty-acid--CoA ligase 6 OS=Mus
           musculus GN=Acsl6 PE=2 SV=1
          Length = 697

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 10/81 (12%)
 Frame = +1

Query: 7   TVVNGCPRMALHKGDSDASLYNTRD*GLLFPANVPCSG-------SDWKEWMAYITRSTD 165
           +V+ GC ++  H  D   ++Y     GL    N PC G         W  +     R+  
Sbjct: 73  SVIGGCTQLLTHYYDDARTMYQVFRRGLSISGNGPCLGFRKPEQPYQWLSYQEVAKRAEF 132

Query: 166 VGMVLVRSETRL---QFYRVF 219
           +G  L++ + ++   QF  VF
Sbjct: 133 LGSGLLQHDCKVGTEQFVGVF 153


>sp|Q89VX9|GLND_BRAJA [Protein-PII] uridylyltransferase
           OS=Bradyrhizobium japonicum GN=glnD PE=3 SV=2
          Length = 929

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +1

Query: 136 WMA-YITRSTDVGMVLVRSETRLQFYRVFLRCYFNE*KYLWS-RVHEHFYN 282
           W+A Y+ R  D   ++ R     Q YR F RC      +LWS R + HFY+
Sbjct: 254 WIAKYVYRVRDTDELVERGVFDAQEYRTFRRCA----DFLWSVRCNLHFYS 300


>sp|Q21106|VPRBP_CAEEL VPRBP-like protein OS=Caenorhabditis elegans
           GN=ZK1251.9 PE=2 SV=5
          Length = 1701

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +3

Query: 192 DKAPILSRISEMLLQ*VEIFVEQGP 266
           D  PIL RISE+L Q  +IF++  P
Sbjct: 50  DPIPILKRISELLEQATDIFIKNDP 74

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943909|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_F20, 5'
         (337 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******