DK943925 [AcEST]

DK943925
Clone id	YMU02A01NGRL0004_G15
Library	YMU02
Length	496
Definition	Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0004_G15. 5' end sequence.
Accession	DK943925
Tissue type	young leaves
Developmental stage	sporophyte
Contig ID	CL1Contig3
Sequence	TATCGTAGCGGGTATAGTTTAGTGGTAAAAGTGTGACTCGTCTCGCAGTGATTTTGATAG TTGAGGGATCGTATCTCGGCTAAATTAACCGAAAGGAAAAACTTTATCTTCGCAGAAAAT ATGTGTTTTCTTATTATTTCTCCAAAATTAGAGGTAGATTAATCAATCTTGTCACTCATT CATTTCAAGAACTAGGGAAGATAGTGACGAAGCAGGATTGTTTTGGTACCCCAAGAAATA CTTGGTTTAATTTCTACTTCCGGGGAGATAAATAAAGAAAAAAAATCTATGGGTAGACGT CTAAGATAGCTGACTCATCGTCACTAAACCTCAGAGAATAAATCTGGGAAAGAAAGTTGG AATAAATAAATCCGGGTTTGTCAAGATTATTGAACATCTATTTGGTTGAACGGGATCCCT CGTTTCAACAACTCGGTGAGATATATTTCCCTAAGGGTTTTTTCCTGAAAAAAAAAAAAA AAAAAAAAAAAAAAAA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK943925\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0004_G15, 5' (467 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A6D2J9
Definition	tr\|A6D2J9\|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio shilonii AK1
Align length	50
Score (bit)	33.5
E-value	5.5
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK943925\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0004_G15, 5' (467 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A6D2J9\|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibri... 33 5.5 tr\|Q4T0X5\|Q4T0X5_TETNG Chromosome undetermined SCAF10805, whole ... 33 9.4 >tr\|A6D2J9\|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio shilonii AK1 GN=VSAK1_01567 PE=4 SV=1 Length = 319 Score = 33.5 bits (75), Expect = 5.5 Identities = 15/50 (30%), Positives = 31/50 (62%) Frame = -1 Query: 188 LKMSDKIDSTSNFGEIIRKHIFSAKIKFFLSVNLAEIRSLNYQNHCET 39 LK +++++D ST + ++++F A +F+L VNL + R++ Q C + Sbjct: 234 LKQIANELDISTKSINLFFKEYLFIAPKRFYLLVNLFKFRNILIQGKCSS 283 >tr\|Q4T0X5\|Q4T0X5_TETNG Chromosome undetermined SCAF10805, whole genome shotgun sequence OS=Tetraodon nigroviridis GN=GSTENG00009096001 PE=4 SV=1 Length = 817 Score = 32.7 bits (73), Expect = 9.4 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = +2 Query: 116 KICVFLLFLQNRINQSCHSFISRTREDSDEAGLFWYPKK 238 ++C + FL+ N+SC +F R RE S L WY K Sbjct: 244 RLCPYASFLRYLAKRNRSCRAFFQRPRERSSAGDLTWYENK 284