DK943928
Clone id YMU02A01NGRL0004_G18
Library
Length 496
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0004_G18. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
TGTGGATTTCGTATTCCAAACATGTTTCAATGAACAAAAAGAGATTCAATTCGGATGCTG
TATCCAAAACGTACAAAGTTTCGGAAATGCCAAAAGGGCAAATGTAGAGGTTGCAGAACG
GACGGTACACGACTTAGTTTCGGAGAATATGGCATTAAAAGCTGTTCAGCGGGTCGTATT
CCATATCAAACCATTGAGGCAGCGCGTCGCGCTATAAGCAGACATTTCCAGAGAAATGGT
CGAATATGGGTAAGAATCTTTGCAGATATTCCCATTACCCGTAAACCCACGGAAGTAAGA
ATGGGAAAAGGAAAGGGAAATCCTACAGGTTGGATGGCTCGTGTGGTGACAGGACAGATC
TTATTTGAAATGGATGGTGTGAGTTTGTCAAATGCTCGAGAGGCTGCGACATTAGCAGCG
CATAGACTATGTATGCCGACTAAGTTTGTTCAATGGTCGTAATTGCTTGCGAAAAAAAAA
AAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P26862
Definition sp|P26862|RM16_MARPO 60S ribosomal protein L16, mitochondrial OS=Marchantia polymorpha
Align length 135
Score (bit) 216.0
E-value 4.0e-56
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943928|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_G18, 5'
(471 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P26862|RM16_MARPO 60S ribosomal protein L16, mitochondrial OS... 216 4e-56
sp|Q95747|RM16_ARATH 60S ribosomal protein L16, mitochondrial OS... 215 7e-56
sp|P46801|RM16_ORYSJ 60S ribosomal protein L16, mitochondrial OS... 193 4e-49
sp|P49389|RM16_BRANA 60S ribosomal protein L16, mitochondrial OS... 191 2e-48
sp|P27927|RM16_MAIZE 60S ribosomal protein L16, mitochondrial OS... 184 1e-46
sp|Q04715|RM16_PETHY 60S ribosomal protein L16, mitochondrial OS... 182 7e-46
sp|A8IAR0|RL16_AZOC5 50S ribosomal protein L16 OS=Azorhizobium c... 159 8e-39
sp|Q07KM5|RL16_RHOP5 50S ribosomal protein L16 OS=Rhodopseudomon... 157 2e-38
sp|Q211F5|RL16_RHOPB 50S ribosomal protein L16 OS=Rhodopseudomon... 156 5e-38
sp|Q47J96|RL16_DECAR 50S ribosomal protein L16 OS=Dechloromonas ... 155 7e-38
sp|Q89J91|RL16_BRAJA 50S ribosomal protein L16 OS=Bradyrhizobium... 155 9e-38
sp|A4YSJ9|RL16_BRASO 50S ribosomal protein L16 OS=Bradyrhizobium... 154 1e-37
sp|Q6N4U1|RL16_RHOPA 50S ribosomal protein L16 OS=Rhodopseudomon... 154 2e-37
sp|Q37M36|RL16_RHOPS 50S ribosomal protein L16 OS=Rhodopseudomon... 152 7e-37
sp|Q2IXQ3|RL16_RHOP2 50S ribosomal protein L16 OS=Rhodopseudomon... 152 7e-37
sp|Q1R0G8|RL16_CHRSD 50S ribosomal protein L16 OS=Chromohalobact... 152 7e-37
sp|A5ELM0|RL16_BRASB 50S ribosomal protein L16 OS=Bradyrhizobium... 152 7e-37
sp|Q1QN23|RL16_NITHX 50S ribosomal protein L16 OS=Nitrobacter ha... 152 9e-37
sp|A5EX92|RL16_DICNV 50S ribosomal protein L16 OS=Dichelobacter ... 152 9e-37
sp|Q21M50|RL16_SACD2 50S ribosomal protein L16 OS=Saccharophagus... 151 1e-36
sp|Q3SSV9|RL16_NITWN 50S ribosomal protein L16 OS=Nitrobacter wi... 151 1e-36
sp|Q82X82|RL16_NITEU 50S ribosomal protein L16 OS=Nitrosomonas e... 151 1e-36
sp|Q0AII8|RL16_NITEC 50S ribosomal protein L16 OS=Nitrosomonas e... 151 1e-36
sp|A6W385|RL16_MARMS 50S ribosomal protein L16 OS=Marinomonas sp... 151 1e-36
sp|A0L5Y0|RL16_MAGSM 50S ribosomal protein L16 OS=Magnetococcus ... 151 1e-36
sp|A9IW18|RL16_BART1 50S ribosomal protein L16 OS=Bartonella tri... 151 2e-36
sp|A0LIJ7|RL16_SYNFM 50S ribosomal protein L16 OS=Syntrophobacte... 150 2e-36
sp|A7HWR8|RL16_PARL1 50S ribosomal protein L16 OS=Parvibaculum l... 150 2e-36
sp|Q7VTC6|RL16_BORPE 50S ribosomal protein L16 OS=Bordetella per... 150 2e-36
sp|Q7W2E9|RL16_BORPA 50S ribosomal protein L16 OS=Bordetella par... 150 2e-36

>sp|P26862|RM16_MARPO 60S ribosomal protein L16, mitochondrial
OS=Marchantia polymorpha GN=RPL16 PE=3 SV=2
Length = 135

Score = 216 bits (550), Expect = 4e-56
Identities = 102/135 (75%), Positives = 117/135 (86%)
Frame = +1

Query: 55 MLYPKRTKFRKCQKGKCRGCRTDGTRLSFGEYGIKSCSAGRIPYQTIEAARRAISRHFQR 234
MLYPKRTKFRK QKG+C+GC+ DGT+L FG+YGIKSC AGRI YQ IEAARRAISR F+R
Sbjct: 1 MLYPKRTKFRKYQKGRCKGCKADGTQLCFGKYGIKSCEAGRISYQAIEAARRAISRKFRR 60

Query: 235 NGRIWVRIFADIPITRKPTEVRMGKGKGNPTGWMARVVTGQILFEMDGVSLSNAREAATL 414
N +IWVR+FADIPIT KP EVRMGKGKGN GW+ARV+ GQILFEMD VSLSNA++AATL
Sbjct: 61 NSKIWVRVFADIPITSKPAEVRMGKGKGNTKGWIARVLKGQILFEMDCVSLSNAQQAATL 120

Query: 415 AAHRLCMPTKFVQWS 459
AAH+L + KF +WS
Sbjct: 121 AAHKLGLSIKFFKWS 135


>sp|Q95747|RM16_ARATH 60S ribosomal protein L16, mitochondrial
OS=Arabidopsis thaliana GN=RPL16 PE=2 SV=3
Length = 179

Score = 215 bits (548), Expect = 7e-56
Identities = 109/162 (67%), Positives = 127/162 (78%), Gaps = 9/162 (5%)
Frame = +1

Query: 1 CGFRIPNMFQ*TKRDSIRMLYPKRTKFRKCQKGKC-RGCRTDGTRLSFGEYGIKSCSAGR 177
CGF I K D +LYPKRTK+ K +KG+C RGC+ DGT+L FG YGIKSC AG
Sbjct: 25 CGFHIVKK----KGD---VLYPKRTKYSKYRKGRCSRGCKPDGTKLGFGRYGIKSCKAGC 77

Query: 178 IPYQTIEAARRAISRHF--------QRNGRIWVRIFADIPITRKPTEVRMGKGKGNPTGW 333
+ Y+ IEAARRAI HF +RNG+IWVR+FAD+PIT KPTEVRMG+GKGNPTGW
Sbjct: 78 LSYRAIEAARRAIIGHFHRAMSGQFRRNGKIWVRVFADLPITGKPTEVRMGRGKGNPTGW 137

Query: 334 MARVVTGQILFEMDGVSLSNAREAATLAAHRLCMPTKFVQWS 459
+ARV TGQILFEMDGVSL+NAR+AATLAAH+LC+ TKFVQWS
Sbjct: 138 IARVSTGQILFEMDGVSLANARQAATLAAHKLCLSTKFVQWS 179


>sp|P46801|RM16_ORYSJ 60S ribosomal protein L16, mitochondrial
OS=Oryza sativa subsp. japonica GN=RPL16 PE=3 SV=1
Length = 185

Score = 193 bits (490), Expect = 4e-49
Identities = 96/144 (66%), Positives = 111/144 (77%), Gaps = 9/144 (6%)
Frame = +1

Query: 55 MLYPKRTKFRKCQKGKC-RGCRTDGTRLSFGEYGIKSCSAGRIPYQTIEAARRA------ 213
+LYPKRTK+ K K +C RGC DGT+L FG YG KSC AGR+ Y+ IEAARRA
Sbjct: 42 VLYPKRTKYSKYSKCRCSRGCEPDGTQLGFGRYGTKSCRAGRLSYRAIEAARRATIGQFH 101

Query: 214 --ISRHFQRNGRIWVRIFADIPITRKPTEVRMGKGKGNPTGWMARVVTGQILFEMDGVSL 387
+S F+RN +IWVR+ AD+PIT KP EVRMG+GKGNPTGW+ARV TGQI FEMDGVSL
Sbjct: 102 RAMSGQFRRNCKIWVRVLADLPITGKPAEVRMGRGKGNPTGWIARVSTGQIPFEMDGVSL 161

Query: 388 SNAREAATLAAHRLCMPTKFVQWS 459
SNAR+AA LAAH+ C TKFVQWS
Sbjct: 162 SNARQAARLAAHKPCSSTKFVQWS 185


>sp|P49389|RM16_BRANA 60S ribosomal protein L16, mitochondrial
OS=Brassica napus GN=RPL16 PE=3 SV=2
Length = 177

Score = 191 bits (484), Expect = 2e-48
Identities = 101/163 (61%), Positives = 117/163 (71%), Gaps = 10/163 (6%)
Frame = +1

Query: 1 CGFRIPNMFQ*TKRDSIRMLYPKRTKFRKCQKGKC-RGCRTDGTRLSFGEYGIKSCSAGR 177
CGF I K D +LYPKRTK+ KG+C RGC+ DGT+L FG YG KSC AGR
Sbjct: 25 CGFHIVKK----KGD---VLYPKRTKY---SKGRCSRGCKPDGTKLGFGRYGTKSCRAGR 74

Query: 178 IPYQTIEAARRAISRH---------FQRNGRIWVRIFADIPITRKPTEVRMGKGKGNPTG 330
+ Y+ IEAARRA H F+RN +IWVR+ AD+PIT KP EVRMG+GKGNPTG
Sbjct: 75 LSYRAIEAARRATIGHSFRRAMSGQFRRNCKIWVRVLADLPITGKPAEVRMGRGKGNPTG 134

Query: 331 WMARVVTGQILFEMDGVSLSNAREAATLAAHRLCMPTKFVQWS 459
W+ARV TGQI FEMDGVSL+NAR+AA LAAH+ C TKFVQWS
Sbjct: 135 WIARVSTGQIPFEMDGVSLANARQAARLAAHKPCSSTKFVQWS 177


>sp|P27927|RM16_MAIZE 60S ribosomal protein L16, mitochondrial
OS=Zea mays GN=RPL16 PE=3 SV=1
Length = 185

Score = 184 bits (468), Expect = 1e-46
Identities = 94/144 (65%), Positives = 109/144 (75%), Gaps = 9/144 (6%)
Frame = +1

Query: 55 MLYPKRTKFRKCQKGKC-RGCRTDGTRLSFGEYGIKSCSAGRIPYQTIEAARRA------ 213
+LYPKRTK+ K K +C RG DGT+L FG YG KS AGR+ Y+ IEAARRA
Sbjct: 42 VLYPKRTKYSKYSKCRCSRGREPDGTQLGFGRYGTKSSRAGRLSYRAIEAARRATIGQFR 101

Query: 214 --ISRHFQRNGRIWVRIFADIPITRKPTEVRMGKGKGNPTGWMARVVTGQILFEMDGVSL 387
+S F+RN +IWVR+ AD+PIT KP EVRMG+GKGNPTGW+ARV TGQI FEMDGVSL
Sbjct: 102 RAMSGQFRRNCKIWVRVLADLPITGKPAEVRMGRGKGNPTGWIARVSTGQIPFEMDGVSL 161

Query: 388 SNAREAATLAAHRLCMPTKFVQWS 459
SNAR+AA LAAH+ C TKFVQWS
Sbjct: 162 SNARQAARLAAHKPCSSTKFVQWS 185


>sp|Q04715|RM16_PETHY 60S ribosomal protein L16, mitochondrial
OS=Petunia hybrida GN=RPL16 PE=2 SV=1
Length = 155

Score = 182 bits (462), Expect = 7e-46
Identities = 95/144 (65%), Positives = 109/144 (75%), Gaps = 9/144 (6%)
Frame = +1

Query: 1 CGFRIPNMFQ*TKRDSIRMLYPKRTKFRKCQKGKC-RGCRTDGTRLSFGEYGIKSCSAGR 177
CGF I KRD +LYPKRTK+ K +KG+C RGC+ DGT+L FG YG KSC AGR
Sbjct: 17 CGFLIVKK----KRD---VLYPKRTKYSKYRKGRCSRGCKPDGTQLGFGRYGTKSCRAGR 69

Query: 178 IPYQTIEAARRAISRHF--------QRNGRIWVRIFADIPITRKPTEVRMGKGKGNPTGW 333
+ Y+ IEAARRAI HF +RNG+IWVR+ ADIPIT KPTEVRMG+GKGNPTGW
Sbjct: 70 LSYRAIEAARRAIIGHFHRAMSGQFRRNGKIWVRVLADIPITGKPTEVRMGRGKGNPTGW 129

Query: 334 MARVVTGQILFEMDGVSLSNAREA 405
+ARV GQILFEMDGVSLSNAR+A
Sbjct: 130 IARVSRGQILFEMDGVSLSNARQA 153


>sp|A8IAR0|RL16_AZOC5 50S ribosomal protein L16 OS=Azorhizobium
caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)
GN=rplP PE=3 SV=1
Length = 137

Score = 159 bits (401), Expect = 8e-39
Identities = 75/133 (56%), Positives = 99/133 (74%)
Frame = +1

Query: 55 MLYPKRTKFRKCQKGKCRGCRTDGTRLSFGEYGIKSCSAGRIPYQTIEAARRAISRHFQR 234
ML PKRTKFRK KG+ G GT L+FGE+G+K+ R+ + IEAARRA++RH +R
Sbjct: 1 MLQPKRTKFRKQFKGRIHGVAKGGTELNFGEFGLKALEPERVTARQIEAARRALTRHMKR 60

Query: 235 NGRIWVRIFADIPITRKPTEVRMGKGKGNPTGWMARVVTGQILFEMDGVSLSNAREAATL 414
GR+W+R+F D+P+T KPTEVRMGKGKG P W A+V G+I+FE+DGV + AREA TL
Sbjct: 61 AGRVWIRVFPDVPVTSKPTEVRMGKGKGAPEYWAAKVKPGRIMFEIDGVPVDLAREALTL 120

Query: 415 AAHRLCMPTKFVQ 453
AA +L + T+F+Q
Sbjct: 121 AAAKLPIKTRFIQ 133


>sp|Q07KM5|RL16_RHOP5 50S ribosomal protein L16 OS=Rhodopseudomonas
palustris (strain BisA53) GN=rplP PE=3 SV=1
Length = 137

Score = 157 bits (398), Expect = 2e-38
Identities = 72/132 (54%), Positives = 101/132 (76%)
Frame = +1

Query: 55 MLYPKRTKFRKCQKGKCRGCRTDGTRLSFGEYGIKSCSAGRIPYQTIEAARRAISRHFQR 234
M+ PK+TKFRK KG+ G + G LSFG++G+K+ + RI + IEAARRA++RH +R
Sbjct: 1 MMQPKKTKFRKAHKGRIHGVASSGATLSFGQFGLKAMAPERITARQIEAARRALTRHMKR 60

Query: 235 NGRIWVRIFADIPITRKPTEVRMGKGKGNPTGWMARVVTGQILFEMDGVSLSNAREAATL 414
GR+W+RIF D+P+++KP EVRMG GKG+P W+ARV G+++FE+DGV+L AREA TL
Sbjct: 61 AGRVWIRIFPDVPVSKKPAEVRMGSGKGSPELWVARVKPGRVIFEIDGVNLQIAREALTL 120

Query: 415 AAHRLCMPTKFV 450
AA +L + T+FV
Sbjct: 121 AAAKLPIKTRFV 132


>sp|Q211F5|RL16_RHOPB 50S ribosomal protein L16 OS=Rhodopseudomonas
palustris (strain BisB18) GN=rplP PE=3 SV=1
Length = 137

Score = 156 bits (394), Expect = 5e-38
Identities = 71/132 (53%), Positives = 100/132 (75%)
Frame = +1

Query: 55 MLYPKRTKFRKCQKGKCRGCRTDGTRLSFGEYGIKSCSAGRIPYQTIEAARRAISRHFQR 234
M+ PK+TKFRK KG+ G T G LSFG++G+K+ + RI + IEAARRA++RH +R
Sbjct: 1 MMQPKKTKFRKAHKGRIHGVATSGATLSFGQFGLKAMAPERITARQIEAARRALTRHMKR 60

Query: 235 NGRIWVRIFADIPITRKPTEVRMGKGKGNPTGWMARVVTGQILFEMDGVSLSNAREAATL 414
GR+W+RIF D+P+++KP EVRMG GKG P W+ARV G+++FE+DGV++ A+EA TL
Sbjct: 61 AGRVWIRIFPDLPVSKKPAEVRMGSGKGTPELWVARVKPGRVIFEIDGVNVQVAKEALTL 120

Query: 415 AAHRLCMPTKFV 450
AA +L + T+FV
Sbjct: 121 AAAKLPIKTRFV 132


>sp|Q47J96|RL16_DECAR 50S ribosomal protein L16 OS=Dechloromonas
aromatica (strain RCB) GN=rplP PE=3 SV=1
Length = 137

Score = 155 bits (393), Expect = 7e-38
Identities = 75/132 (56%), Positives = 98/132 (74%)
Frame = +1

Query: 55 MLYPKRTKFRKCQKGKCRGCRTDGTRLSFGEYGIKSCSAGRIPYQTIEAARRAISRHFQR 234
ML P R KFRK KG+ G T GT++SFGE+G+K+ GR+ + IEAARRA++RH +R
Sbjct: 1 MLQPNRRKFRKEHKGRNEGLATRGTKVSFGEWGLKAIGRGRLTARQIEAARRAMTRHIKR 60

Query: 235 NGRIWVRIFADIPITRKPTEVRMGKGKGNPTGWMARVVTGQILFEMDGVSLSNAREAATL 414
GRIW+RIF D PI++KP EVRMG GKGNP W+A + G++L+EMDGV+ + AREA L
Sbjct: 61 GGRIWIRIFPDKPISKKPAEVRMGNGKGNPEYWVAEIQPGKVLYEMDGVNEALAREAFAL 120

Query: 415 AAHRLCMPTKFV 450
AA +L +PT FV
Sbjct: 121 AAAKLPIPTTFV 132


tr_hit_id Q1XG98
Definition tr|Q1XG98|Q1XG98_PHYPA Ribosomal protein L16 OS=Physcomitrella patens
Align length 134
Score (bit) 231.0
E-value 2.0e-59
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943928|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_G18, 5'
(471 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q1XG98|Q1XG98_PHYPA Ribosomal protein L16 OS=Physcomitrella p... 231 2e-59
tr|Q5MA03|Q5MA03_TOBAC Ribosomal protein L16 OS=Nicotiana tabacu... 214 2e-54
tr|Q35645|Q35645_PETSP Ribosomal protein L16 OS=Petunia sp. GN=Y... 214 2e-54
tr|A9SY18|A9SY18_PHYPA Predicted protein (Fragment) OS=Physcomit... 213 4e-54
tr|Q7YAM1|Q7YAM1_CHAVU Ribosomal protein L16 OS=Chara vulgaris G... 211 1e-53
tr|O99880|O99880_SOLTU Ribosomal protein L16 OS=Solanum tuberosu... 211 1e-53
tr|B0BLF5|B0BLF5_CYCTA Ribosomal protein L16 OS=Cycas taitungens... 207 2e-52
tr|Q35224|Q35224_OENBE Ribosomal protein L16 (Fragment) OS=Oenot... 206 6e-52
tr|B6VJV9|B6VJV9_VITVI Ribosomal protein L16 OS=Vitis vinifera G... 202 9e-51
tr|Q8HDK8|Q8HDK8_MAGSO Ribosomal protein L16 OS=Magnolia soulang... 201 1e-50
tr|Q8HHY1|Q8HHY1_HELAN Ribosomal protein L16 OS=Helianthus annuu... 199 6e-50
tr|Q5IA32|Q5IA32_9DIPS Ribosomal protein L16 (Fragment) OS=Lonic... 197 3e-49
tr|A7KNJ7|A7KNJ7_ARATH Ribosomal protein L16 (Fragment) OS=Arabi... 196 4e-49
tr|Q5IA35|Q5IA35_PINTH Ribosomal protein L16 (Fragment) OS=Pinus... 194 2e-48
tr|Q5IA33|Q5IA33_AGAAE Ribosomal protein L16 (Fragment) OS=Agave... 194 2e-48
tr|Q5IA31|Q5IA31_EICCR Ribosomal protein L16 (Fragment) OS=Eichh... 194 2e-48
tr|Q5IA28|Q5IA28_CALFL Ribosomal protein L16 (Fragment) OS=Calyc... 193 3e-48
tr|Q5IA29|Q5IA29_PLAOC Ribosomal protein L16 (Fragment) OS=Plata... 193 4e-48
tr|Q2F985|Q2F985_ORYSI Ribosomal protein L16 OS=Oryza sativa sub... 193 4e-48
tr|Q2F932|Q2F932_ORYSJ Os12g0524700 protein OS=Oryza sativa subs... 193 4e-48
tr|Q5IA34|Q5IA34_9MAGN Ribosomal protein L16 (Fragment) OS=Nymph... 190 3e-47
tr|B8Q6P4|B8Q6P4_BAMOL Ribosomal protein L16 OS=Bambusa oldhamii... 189 5e-47
tr|Q5IA30|Q5IA30_AMBTC Ribosomal protein L16 (Fragment) OS=Ambor... 187 2e-46
tr|Q332Q3|Q332Q3_WHEAT Rpl16 OS=Triticum aestivum GN=rpl16 PE=3 ... 187 2e-46
tr|Q6R9I9|Q6R9I9_MAIZE Ribosomal protein L16-like OS=Zea mays GN... 184 1e-45
tr|Q1KKA5|Q1KKA5_MAIZE Ribosomal protein L16 OS=Zea mays subsp. ... 184 1e-45
tr|Q0GRB9|Q0GRB9_ZEALU Ribosomal protein L16 OS=Zea luxurians GN... 184 1e-45
tr|Q0GR71|Q0GR71_ZEAPE Ribosomal protein L16 OS=Zea perennis GN=... 184 1e-45
tr|Q0GR36|Q0GR36_ZEAMP Ribosomal protein L16 OS=Zea mays subsp. ... 184 1e-45
tr|Q09EQ5|Q09EQ5_TRIDA Ribosomal protein L16 OS=Tripsacum dactyl... 184 1e-45

>tr|Q1XG98|Q1XG98_PHYPA Ribosomal protein L16 OS=Physcomitrella
patens GN=rpl16 PE=3 SV=1
Length = 135

Score = 231 bits (588), Expect = 2e-59
Identities = 108/134 (80%), Positives = 122/134 (91%)
Frame = +1

Query: 55 MLYPKRTKFRKCQKGKCRGCRTDGTRLSFGEYGIKSCSAGRIPYQTIEAARRAISRHFQR 234
MLYPKRTKFRK QKG+ +GC+ DGT+L FG+YG+KSC AGRI YQ IEAARRAISR F+R
Sbjct: 1 MLYPKRTKFRKYQKGRFKGCKADGTQLCFGKYGMKSCEAGRISYQAIEAARRAISREFRR 60

Query: 235 NGRIWVRIFADIPITRKPTEVRMGKGKGNPTGWMARVVTGQILFEMDGVSLSNAREAATL 414
NG+IWVR+FADIPIT KPTEVRMGKGKGN TGW+ARVV GQILFEMDGVSLSNA++AATL
Sbjct: 61 NGQIWVRVFADIPITSKPTEVRMGKGKGNSTGWIARVVEGQILFEMDGVSLSNAQQAATL 120

Query: 415 AAHRLCMPTKFVQW 456
AAH+LC+ TKFVQW
Sbjct: 121 AAHKLCLSTKFVQW 134


>tr|Q5MA03|Q5MA03_TOBAC Ribosomal protein L16 OS=Nicotiana tabacum
GN=rpl16 PE=3 SV=1
Length = 171

Score = 214 bits (544), Expect = 2e-54
Identities = 110/162 (67%), Positives = 125/162 (77%), Gaps = 9/162 (5%)
Frame = +1

Query: 1 CGFRIPNMFQ*TKRDSIRMLYPKRTKFRKCQKGKC-RGCRTDGTRLSFGEYGIKSCSAGR 177
CGF I KRD +LYPKRTK+ K +KG+C RGC+ DGT+L FG YG KSC AGR
Sbjct: 17 CGFPIVKK----KRD---VLYPKRTKYSKYRKGRCSRGCKPDGTQLGFGRYGTKSCRAGR 69

Query: 178 IPYQTIEAARRAISRHF--------QRNGRIWVRIFADIPITRKPTEVRMGKGKGNPTGW 333
+ Y+ IEAARRAI HF +RNG+IWVR+ ADIPIT KPTEVRMG+GKGNPTGW
Sbjct: 70 LSYRAIEAARRAIIGHFHRAMSGQFRRNGKIWVRVLADIPITGKPTEVRMGRGKGNPTGW 129

Query: 334 MARVVTGQILFEMDGVSLSNAREAATLAAHRLCMPTKFVQWS 459
+ARV GQILFEMDGVSLSNAR+AATLAAH+LC TKFVQWS
Sbjct: 130 IARVSRGQILFEMDGVSLSNARQAATLAAHKLCSSTKFVQWS 171


>tr|Q35645|Q35645_PETSP Ribosomal protein L16 OS=Petunia sp.
GN=Yrpl16 PE=3 SV=1
Length = 171

Score = 214 bits (544), Expect = 2e-54
Identities = 110/162 (67%), Positives = 125/162 (77%), Gaps = 9/162 (5%)
Frame = +1

Query: 1 CGFRIPNMFQ*TKRDSIRMLYPKRTKFRKCQKGKC-RGCRTDGTRLSFGEYGIKSCSAGR 177
CGF I KRD +LYPKRTK+ K +KG+C RGC+ DGT+L FG YG KSC AGR
Sbjct: 17 CGFLIVKK----KRD---VLYPKRTKYSKYRKGRCSRGCKPDGTQLGFGRYGTKSCRAGR 69

Query: 178 IPYQTIEAARRAISRHF--------QRNGRIWVRIFADIPITRKPTEVRMGKGKGNPTGW 333
+ Y+ IEAARRAI HF +RNG+IWVR+ ADIPIT KPTEVRMG+GKGNPTGW
Sbjct: 70 LSYRAIEAARRAIIGHFHRAMSGQFRRNGKIWVRVLADIPITGKPTEVRMGRGKGNPTGW 129

Query: 334 MARVVTGQILFEMDGVSLSNAREAATLAAHRLCMPTKFVQWS 459
+ARV GQILFEMDGVSLSNAR+AATLAAH+LC TKFVQWS
Sbjct: 130 IARVSRGQILFEMDGVSLSNARQAATLAAHKLCSSTKFVQWS 171


>tr|A9SY18|A9SY18_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_137190 PE=3 SV=1
Length = 132

Score = 213 bits (542), Expect = 4e-54
Identities = 101/131 (77%), Positives = 113/131 (86%)
Frame = +1

Query: 64 PKRTKFRKCQKGKCRGCRTDGTRLSFGEYGIKSCSAGRIPYQTIEAARRAISRHFQRNGR 243
PK TKFRK KG+ +GC+ DGT+L F +YG+KSC AGRI YQ IEAARRAISR FQR+G+
Sbjct: 1 PKHTKFRKYHKGRFKGCKADGTQLCFEKYGMKSCEAGRISYQAIEAARRAISREFQRDGQ 60

Query: 244 IWVRIFADIPITRKPTEVRMGKGKGNPTGWMARVVTGQILFEMDGVSLSNAREAATLAAH 423
IWVR+FADIPIT KPTEVRMGKGKGN TGW+ARVV QILFEMDGVSLSNA++AATLA H
Sbjct: 61 IWVRVFADIPITNKPTEVRMGKGKGNSTGWIARVVKRQILFEMDGVSLSNAQQAATLAVH 120

Query: 424 RLCMPTKFVQW 456
RLC TKFVQW
Sbjct: 121 RLCSSTKFVQW 131


>tr|Q7YAM1|Q7YAM1_CHAVU Ribosomal protein L16 OS=Chara vulgaris
GN=rpl16 PE=3 SV=1
Length = 134

Score = 211 bits (538), Expect = 1e-53
Identities = 102/135 (75%), Positives = 117/135 (86%)
Frame = +1

Query: 55 MLYPKRTKFRKCQKGKCRGCRTDGTRLSFGEYGIKSCSAGRIPYQTIEAARRAISRHFQR 234
MLYPKRTKFRK QKG+ +G +L FG+YGI+SC AGRI YQ IEAARRAI+R F+R
Sbjct: 1 MLYPKRTKFRKYQKGRSKGSHA-AAQLCFGKYGIQSCEAGRISYQGIEAARRAITRKFRR 59

Query: 235 NGRIWVRIFADIPITRKPTEVRMGKGKGNPTGWMARVVTGQILFEMDGVSLSNAREAATL 414
NG+IWVR+F+DIPIT KPTEVRMGKGKGNPTGW+ARV GQILFEMDGVSLSNA+ AATL
Sbjct: 60 NGQIWVRVFSDIPITSKPTEVRMGKGKGNPTGWIARVSQGQILFEMDGVSLSNAQAAATL 119

Query: 415 AAHRLCMPTKFVQWS 459
A+H+LC+ TKFVQWS
Sbjct: 120 ASHKLCLSTKFVQWS 134


>tr|O99880|O99880_SOLTU Ribosomal protein L16 OS=Solanum tuberosum
GN=Yrpl16 PE=3 SV=1
Length = 171

Score = 211 bits (537), Expect = 1e-53
Identities = 108/162 (66%), Positives = 123/162 (75%), Gaps = 9/162 (5%)
Frame = +1

Query: 1 CGFRIPNMFQ*TKRDSIRMLYPKRTKFRKCQKGKC-RGCRTDGTRLSFGEYGIKSCSAGR 177
CGF I KR + LYPKRTK+ K +KG+C RGC+ DGT+L FG YG KSC AGR
Sbjct: 17 CGFHIVK-----KRGDV--LYPKRTKYSKYRKGRCSRGCKPDGTQLGFGRYGTKSCRAGR 69

Query: 178 IPYQTIEAARRAISRHFQR--------NGRIWVRIFADIPITRKPTEVRMGKGKGNPTGW 333
+ Y+ IEAARRAI HF R NG+IWVR+ ADIPIT KP+EVRMG+GKGNPTGW
Sbjct: 70 LSYRAIEAARRAIIGHFHRAMSGQFPRNGKIWVRVLADIPITGKPSEVRMGRGKGNPTGW 129

Query: 334 MARVVTGQILFEMDGVSLSNAREAATLAAHRLCMPTKFVQWS 459
+ARV GQILFEMDGVSLSNAR+AATLAAH+LC TKFVQWS
Sbjct: 130 IARVSRGQILFEMDGVSLSNARQAATLAAHKLCSSTKFVQWS 171


>tr|B0BLF5|B0BLF5_CYCTA Ribosomal protein L16 OS=Cycas taitungensis
GN=rpl16 PE=3 SV=1
Length = 177

Score = 207 bits (528), Expect = 2e-52
Identities = 102/134 (76%), Positives = 113/134 (84%), Gaps = 1/134 (0%)
Frame = +1

Query: 61 YPKRTKFRKCQKGKC-RGCRTDGTRLSFGEYGIKSCSAGRIPYQTIEAARRAISRHFQRN 237
YPKRT++RK +KG C RGC TDGT+L FG YGIKSC AGRI Y+ IEAARRAIS F+RN
Sbjct: 44 YPKRTRYRKYRKGICSRGCETDGTQLGFGRYGIKSCGAGRISYRAIEAARRAISGQFRRN 103

Query: 238 GRIWVRIFADIPITRKPTEVRMGKGKGNPTGWMARVVTGQILFEMDGVSLSNAREAATLA 417
G+I VR+FAD PIT KPTEVR GKGKGNPTGW+AR TGQI FEMDGVSLSNAR+AATLA
Sbjct: 104 GQIRVRVFADPPITGKPTEVRTGKGKGNPTGWIARASTGQIPFEMDGVSLSNARQAATLA 163

Query: 418 AHRLCMPTKFVQWS 459
AH+ C TKFVQWS
Sbjct: 164 AHKPCSSTKFVQWS 177


>tr|Q35224|Q35224_OENBE Ribosomal protein L16 (Fragment)
OS=Oenothera bertiana GN=rpl16 PE=3 SV=1
Length = 144

Score = 206 bits (523), Expect = 6e-52
Identities = 101/144 (70%), Positives = 116/144 (80%), Gaps = 9/144 (6%)
Frame = +1

Query: 55 MLYPKRTKFRKCQKGKC-RGCRTDGTRLSFGEYGIKSCSAGRIPYQTIEAARRAISRHF- 228
+LYPKRTK+ K +KG+C RGC DGT+LSFG YG KSC AGR+ Y+ IEAARRA F
Sbjct: 1 VLYPKRTKYSKYRKGRCSRGCEPDGTQLSFGRYGTKSCRAGRLSYRAIEAARRATIGQFH 60

Query: 229 -------QRNGRIWVRIFADIPITRKPTEVRMGKGKGNPTGWMARVVTGQILFEMDGVSL 387
+RNG+IWVR+ AD+PIT KPTEVRMG+GKGNPTGW+ARV TGQILFEMDGVSL
Sbjct: 61 RAMSGQSRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIARVSTGQILFEMDGVSL 120

Query: 388 SNAREAATLAAHRLCMPTKFVQWS 459
SNAR+AATLAAH+ C TKFVQWS
Sbjct: 121 SNARQAATLAAHKPCSSTKFVQWS 144


>tr|B6VJV9|B6VJV9_VITVI Ribosomal protein L16 OS=Vitis vinifera
GN=rpl16 PE=4 SV=1
Length = 185

Score = 202 bits (513), Expect = 9e-51
Identities = 105/162 (64%), Positives = 122/162 (75%), Gaps = 9/162 (5%)
Frame = +1

Query: 1 CGFRIPNMFQ*TKRDSIRMLYPKRTKFRKCQKGKC-RGCRTDGTRLSFGEYGIKSCSAGR 177
CGF I KRD +LYPKRTK+ K +KG+C RG DGT+L FG YG +SC AGR
Sbjct: 31 CGFHIVKK----KRD---VLYPKRTKYSKYRKGRCSRGREPDGTQLGFGRYGTQSCRAGR 83

Query: 178 IPYQTIEAARRA--------ISRHFQRNGRIWVRIFADIPITRKPTEVRMGKGKGNPTGW 333
+ Y+ IEAARRA +S F+RNG+IWVR+ AD+PIT KPTEVRMG+GKGNPTGW
Sbjct: 84 LSYRAIEAARRATIGQFHRAMSGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGW 143

Query: 334 MARVVTGQILFEMDGVSLSNAREAATLAAHRLCMPTKFVQWS 459
+ARV TGQI FEMDGVSLSNAR+AATLAAH+ C TKFVQWS
Sbjct: 144 IARVSTGQIPFEMDGVSLSNARQAATLAAHKPCSSTKFVQWS 185


>tr|Q8HDK8|Q8HDK8_MAGSO Ribosomal protein L16 OS=Magnolia
soulangeana GN=rpl16 PE=3 SV=1
Length = 144

Score = 201 bits (512), Expect = 1e-50
Identities = 100/144 (69%), Positives = 115/144 (79%), Gaps = 9/144 (6%)
Frame = +1

Query: 55 MLYPKRTKFRKCQKGKC-RGCRTDGTRLSFGEYGIKSCSAGRIPYQTIEAARRA------ 213
MLYPKRTK+ K +KG+C RG DGT+L FG YG KSC AGR+ Y+ IEAARRA
Sbjct: 1 MLYPKRTKYSKYRKGRCSRGREPDGTQLGFGRYGTKSCRAGRLSYRAIEAARRATIGQFH 60

Query: 214 --ISRHFQRNGRIWVRIFADIPITRKPTEVRMGKGKGNPTGWMARVVTGQILFEMDGVSL 387
+S F+RNG+IWVR+ AD+PIT KPTEVRMG+GKGNPTGW+ARV TGQI FEMDGVSL
Sbjct: 61 RAMSGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIARVSTGQIPFEMDGVSL 120

Query: 388 SNAREAATLAAHRLCMPTKFVQWS 459
SNAR+AATLAAH+ C TKFVQWS
Sbjct: 121 SNARQAATLAAHKPCSSTKFVQWS 144