DK943933 |
Clone id |
YMU02A01NGRL0004_H01 |
Library |
YMU02 |
Length |
611 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0004_H01. 5' end sequence. |
Accession |
DK943933 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL36Contig1 |
Sequence |
CTCTCATTCCTTAACATCTGCTGCGGAATACTCGTCGGCGACAGCCATGGGTCGAAGACC TGCAAGGTGCTACCGGCAGATTAAAAACAAGCCATATCCAAAATCTCGTTACTGTAGGGG TGTACCCGACCCAAAAATTCGTATATATGATGTTGGCATGAAGAAAAAGGGTGTTGATGA GTTTCCCTTTTGTGTGCACCTTGTGAGTTGGGAGAAAGAAAATGTCTCCAGTGAAGGCCT GGAGGCAGCTCGTATTGCTTGCAACAAATACATGACAAAATTTGCTGGAAAGGATGCTTT TCATCTACGAGTTCGCGTGCACCCTTTCCATGTTCTTCGTATCAACAAGATGCTTTCATG TGCCGGAGCTGATAGGCTCCAGACAGGAATGAGGGGTGCTTTTGGAAAGCCCCAGGGCAC TTGTGCGCGAGTTGACATTGGGCAGGTCCTATTGAGCGTCCGCTGCAAGGACAATAATGG TATACATGCCCAGGAGGCCTTGCGTCGCGCTAAGTTCAAATTTCCTGGAAGGCAGAAGAT TATTGTGAGCCGAAAATGGGGATTCACCAAATTTTCTCGAACTGACTACTTGAAGTGGAA GGAAGAGAACA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SPB3 |
Definition |
sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10 OS=Vitis riparia |
Align length |
188 |
Score (bit) |
376.0 |
E-value |
1.0e-104 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QTC5 |
Definition |
tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
188 |
Score (bit) |
383.0 |
E-value |
1.0e-105 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943933|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0004_H01, 5' (611 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genom... 383 e-105 tr|A9U2S2|A9U2S2_PHYPA Predicted protein OS=Physcomitrella paten... 378 e-103 tr|A9TWJ0|A9TWJ0_PHYPA Predicted protein OS=Physcomitrella paten... 378 e-103 tr|A9RQA3|A9RQA3_PHYPA Predicted protein OS=Physcomitrella paten... 378 e-103 tr|B3TLM0|B3TLM0_ELAGV QM-like protein OS=Elaeis guineensis var.... 377 e-103 tr|Q6DV76|Q6DV76_9FABA QM family protein OS=Caragana jubata GN=Q... 376 e-103 tr|Q9FUN3|Q9FUN3_ELAGV QM-like protein OS=Elaeis guineensis var.... 375 e-103 tr|Q6DV42|Q6DV42_CAMSI QM-like protein OS=Camellia sinensis PE=2... 375 e-102 tr|Q3SC85|Q3SC85_SOLLC 60S ribosomal protein L10 OS=Solanum lyco... 372 e-101 tr|A7NXZ2|A7NXZ2_VITVI Chromosome chr6 scaffold_3, whole genome ... 371 e-101 tr|B6TAQ2|B6TAQ2_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 371 e-101 tr|Q38HS5|Q38HS5_SOLTU 60S ribosomal protein L10-like protein OS... 370 e-101 tr|B6T5B9|B6T5B9_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 370 e-101 tr|B4FPT8|B4FPT8_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 370 e-101 tr|B6TD86|B6TD86_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 370 e-101 tr|A9RCU9|A9RCU9_PHYPA Predicted protein (Fragment) OS=Physcomit... 370 e-101 tr|A9P8W6|A9P8W6_POPTR Putative uncharacterized protein OS=Popul... 369 e-101 tr|B6UGR9|B6UGR9_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 368 e-100 tr|B7FGF8|B7FGF8_MEDTR Putative uncharacterized protein OS=Medic... 367 e-100 tr|A9PGG5|A9PGG5_POPTR Putative uncharacterized protein OS=Popul... 367 e-100 tr|A9NPP8|A9NPP8_PICSI Putative uncharacterized protein OS=Picea... 363 4e-99 tr|B7E5G0|B7E5G0_ORYSJ cDNA clone:001-035-D11, full insert seque... 361 2e-98 tr|B7EBT7|B7EBT7_ORYSJ cDNA clone:002-188-A02, full insert seque... 359 8e-98 tr|A3B0D3|A3B0D3_ORYSJ Putative uncharacterized protein OS=Oryza... 359 8e-98 tr|A9NPT9|A9NPT9_PICSI Putative uncharacterized protein OS=Picea... 358 2e-97 tr|Q2HIH6|Q2HIH6_ARATH At1g26910 OS=Arabidopsis thaliana PE=2 SV=1 353 6e-96 tr|A2XGB9|A2XGB9_ORYSI Putative uncharacterized protein OS=Oryza... 337 2e-91 tr|Q10LW7|Q10LW7_ORYSJ 60S ribosomal protein L10, putative, expr... 335 2e-90 tr|B8AYH0|B8AYH0_ORYSI Putative uncharacterized protein OS=Oryza... 328 1e-88 tr|Q0DS57|Q0DS57_ORYSJ Os03g0332500 protein OS=Oryza sativa subs... 327 4e-88
>tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006249001 PE=4 SV=1 Length = 224
Score = 383 bits (983), Expect = e-105 Identities = 181/188 (96%), Positives = 184/188 (97%) Frame = +2
Query: 47 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 226 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
Query: 227 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 406 SSE LEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 407 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 586 KPQGTCARV+IGQVLLSVRCKD NG HAQEALRRAKFKFPGRQKIIVSRKWGFTKFSR D Sbjct: 121 KPQGTCARVNIGQVLLSVRCKDGNGNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
Query: 587 YLKWKEEN 610 Y+KWK+EN Sbjct: 181 YVKWKQEN 188
>tr|A9U2S2|A9U2S2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_227764 PE=4 SV=1 Length = 223
Score = 378 bits (971), Expect = e-103 Identities = 177/188 (94%), Positives = 183/188 (97%) Frame = +2
Query: 47 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 226 MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 227 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 406 SSE LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 407 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 586 KPQG CARV IGQVLLSVRCKD NG+HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+R D Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDQNGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFARVD 180
Query: 587 YLKWKEEN 610 Y+KWKEEN Sbjct: 181 YVKWKEEN 188
>tr|A9TWJ0|A9TWJ0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172372 PE=4 SV=1 Length = 223
Score = 378 bits (971), Expect = e-103 Identities = 177/188 (94%), Positives = 183/188 (97%) Frame = +2
Query: 47 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 226 MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 227 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 406 SSE LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 407 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 586 KPQG CARV IGQVLLSVRCKD NG+HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+R D Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDQNGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFARVD 180
Query: 587 YLKWKEEN 610 Y+KWKEEN Sbjct: 181 YVKWKEEN 188
>tr|A9RQA3|A9RQA3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_177230 PE=4 SV=1 Length = 223
Score = 378 bits (971), Expect = e-103 Identities = 177/188 (94%), Positives = 183/188 (97%) Frame = +2
Query: 47 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 226 MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 227 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 406 SSE LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 407 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 586 KPQG CARV IGQVLLSVRCKD NG+HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+R D Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDQNGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFARVD 180
Query: 587 YLKWKEEN 610 Y+KWKEEN Sbjct: 181 YVKWKEEN 188
>tr|B3TLM0|B3TLM0_ELAGV QM-like protein OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 224
Score = 377 bits (969), Expect = e-103 Identities = 179/188 (95%), Positives = 182/188 (96%) Frame = +2
Query: 47 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 226 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
Query: 227 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 406 SSE LEAARIACNKYM K+AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMAKYAGKDAFHLRMRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 407 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 586 KPQGTCARV IGQVLLSVRCKD+N HAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD Sbjct: 121 KPQGTCARVMIGQVLLSVRCKDSNSNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 180
Query: 587 YLKWKEEN 610 YLKWK EN Sbjct: 181 YLKWKSEN 188
>tr|Q6DV76|Q6DV76_9FABA QM family protein OS=Caragana jubata GN=QM PE=2 SV=1 Length = 216
Score = 376 bits (965), Expect = e-103 Identities = 177/188 (94%), Positives = 182/188 (96%) Frame = +2
Query: 47 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 226 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
Query: 227 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 406 SSE LEAARIACNKY+TKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYLTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 407 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 586 KPQGTCARV IGQVLLSVRCKD N HAQEALRRAKFKFPGRQKIIVSRKWGFTK++RTD Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDGNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKYNRTD 180
Query: 587 YLKWKEEN 610 YL+WK EN Sbjct: 181 YLRWKSEN 188
>tr|Q9FUN3|Q9FUN3_ELAGV QM-like protein OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 224
Score = 375 bits (964), Expect = e-103 Identities = 177/188 (94%), Positives = 181/188 (96%) Frame = +2
Query: 47 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 226 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
Query: 227 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 406 SSE LEAARIACNKYM K+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 407 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 586 KPQGTCARV IGQVLLSVRCKD N HAQEALRRAKFKFPGRQKII+SRKWGFTKF+RTD Sbjct: 121 KPQGTCARVMIGQVLLSVRCKDGNSNHAQEALRRAKFKFPGRQKIIISRKWGFTKFNRTD 180
Query: 587 YLKWKEEN 610 YL+WK EN Sbjct: 181 YLRWKSEN 188
>tr|Q6DV42|Q6DV42_CAMSI QM-like protein OS=Camellia sinensis PE=2 SV=1 Length = 216
Score = 375 bits (962), Expect = e-102 Identities = 177/188 (94%), Positives = 181/188 (96%) Frame = +2
Query: 47 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 226 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
Query: 227 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 406 SSE LEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN MLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINTMLSCAGADRLQTGMRGAFG 120
Query: 407 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 586 KPQGTCARV IGQVLLSVRCKD N HAQEALRRAKFKFPGRQKIIVSRKWGFTK++RTD Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDGNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKYNRTD 180
Query: 587 YLKWKEEN 610 YL+WK EN Sbjct: 181 YLRWKSEN 188
>tr|Q3SC85|Q3SC85_SOLLC 60S ribosomal protein L10 OS=Solanum lycopersicum GN=ACI29 PE=2 SV=1 Length = 220
Score = 372 bits (954), Expect = e-101 Identities = 178/188 (94%), Positives = 180/188 (95%) Frame = +2
Query: 47 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 226 MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
Query: 227 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 406 SSE LEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 407 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 586 KPQG CARV IGQVLLSVRCKD N HAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDGNANHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 180
Query: 587 YLKWKEEN 610 YLK+K EN Sbjct: 181 YLKYKSEN 188
>tr|A7NXZ2|A7NXZ2_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023920001 PE=4 SV=1 Length = 231
Score = 371 bits (953), Expect = e-101 Identities = 175/184 (95%), Positives = 178/184 (96%) Frame = +2
Query: 59 PARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEG 238 PARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE Sbjct: 16 PARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEA 75
Query: 239 LEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQG 418 LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQG Sbjct: 76 LEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQG 135
Query: 419 TCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYLKW 598 TCARV IGQVLLSVRCKD N HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RTDY+KW Sbjct: 136 TCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRTDYIKW 195
Query: 599 KEEN 610 K EN Sbjct: 196 KSEN 199
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