DK943956 |
Clone id |
YMU02A01NGRL0004_I02 |
Library |
YMU02 |
Length |
549 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0004_I02. 5' end sequence. |
Accession |
DK943956 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
- |
Sequence |
GTCAACTTTCCGTTCCAAATTGGACCTCTGTGTGATGTGAAAGTTACCCCGAAATTAAAG TTTTGAGGTGCTTTTGCTTTGCAGTTTTAAACAATGACACAAAATGTTTTAATGACGTGC AGGTTGTTCGGATCAACTTCTTTCGTGGATTTCAGTTTTCTGTTACTTGGTGGGCTTATA CATTCCCAATGACTGCATCAACAATTGCAACAATCAACTATGCGGTTGAAGTTCGGCATC CTATCACACAGGGTATGGCAGTCGTTCTCTCATGCATTTCAAGTGTGGTGGTTATGAGTG TATTTGTGGCCACACTGTACCATGCAGTGAAGGGCAATCTACTTCCAAATGATGTGGCAA TTGCCATCACGAGAAAGCGACACAAACGAAAGCAAAAGGGCTCAAAAGTAGATCCTCTGT TTGAGAAGATGTCGAATGAGGATGAAGATGATTCAACAAAGCTGTTTTTGGCAAGTGAGG GAGGGACCATTGTCGCGTCTCTTGAAAACGGTTTGATCAGTTTCACATCAGATCCTTTTC CTGTGTGTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q63755 |
Definition |
sp|Q63755|PRDM2_RAT PR domain zinc finger protein 2 OS=Rattus norvegicus |
Align length |
54 |
Score (bit) |
32.7 |
E-value |
1.2 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QKA1 |
Definition |
tr|A7QKA1|A7QKA1_VITVI Chromosome chr2 scaffold_112, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
96 |
Score (bit) |
109.0 |
E-value |
8.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943956|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0004_I02, 5' (549 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QKA1|A7QKA1_VITVI Chromosome chr2 scaffold_112, whole genom... 109 8e-23 tr|Q6I589|Q6I589_ORYSJ Os05g0584900 protein OS=Oryza sativa subs... 108 2e-22 tr|A3B790|A3B790_ORYSJ Putative uncharacterized protein OS=Oryza... 108 2e-22 tr|Q5ZE68|Q5ZE68_ORYSJ Putative uncharacterized protein P0501G01... 106 9e-22 tr|A2WSR8|A2WSR8_ORYSI Putative uncharacterized protein OS=Oryza... 106 9e-22 tr|A2Y7Z7|A2Y7Z7_ORYSI Putative uncharacterized protein OS=Oryza... 105 1e-21 tr|B6SWN8|B6SWN8_MAIZE C4-dicarboxylate transporter/malic acid t... 102 2e-20 tr|A7QGD4|A7QGD4_VITVI Chromosome undetermined scaffold_91, whol... 102 2e-20 tr|A2ZQW2|A2ZQW2_ORYSJ Putative uncharacterized protein OS=Oryza... 100 7e-20 tr|Q9FLV9|Q9FLV9_ARATH Similarity to unknown protein (At5g24030)... 100 9e-20 tr|Q75G55|Q75G55_ORYSJ Os05g0219900 protein OS=Oryza sativa subs... 99 1e-19 tr|Q5NAK4|Q5NAK4_ORYSJ Putative uncharacterized protein P0443E07... 99 1e-19 tr|Q5NAK3|Q5NAK3_ORYSJ cDNA clone:J023143J08, full insert sequen... 99 1e-19 tr|Q0JPE8|Q0JPE8_ORYSJ Os01g0226600 protein (Fragment) OS=Oryza ... 99 1e-19 tr|B8AAY8|B8AAY8_ORYSI Putative uncharacterized protein OS=Oryza... 99 1e-19 tr|A2Y1P3|A2Y1P3_ORYSI Putative uncharacterized protein OS=Oryza... 99 1e-19 tr|Q9LD83|Q9LD83_ARATH T12C24.3 (At1g12480/T12C24_4) (F5O11.23) ... 97 6e-19 tr|A9RU49|A9RU49_PHYPA Predicted protein (Fragment) OS=Physcomit... 97 7e-19 tr|Q8L4G8|Q8L4G8_ORYSJ C4-dicarboxylate transporter-like protein... 96 9e-19 tr|A2WQC0|A2WQC0_ORYSI Putative uncharacterized protein OS=Oryza... 96 9e-19 tr|Q7XTX7|Q7XTX7_ORYSJ Os04g0574700 protein OS=Oryza sativa subs... 91 5e-17 tr|A2XWN1|A2XWN1_ORYSI Putative uncharacterized protein OS=Oryza... 91 5e-17 tr|Q9SUE2|Q9SUE2_ARATH Putative uncharacterized protein T13J8.80... 89 2e-16 tr|Q9ASQ7|Q9ASQ7_ARATH AT4g27970/T13J8_80 OS=Arabidopsis thalian... 89 2e-16 tr|A9SH15|A9SH15_PHYPA Predicted protein (Fragment) OS=Physcomit... 87 4e-16 tr|A9RQS2|A9RQS2_PHYPA Predicted protein (Fragment) OS=Physcomit... 85 2e-15 tr|A2YIS4|A2YIS4_ORYSI Putative uncharacterized protein OS=Oryza... 79 1e-13 tr|Q6ZLB6|Q6ZLB6_ORYSJ Os07g0181100 protein OS=Oryza sativa subs... 76 1e-12 tr|A3BH69|A3BH69_ORYSJ Putative uncharacterized protein OS=Oryza... 76 1e-12 tr|A9TDH3|A9TDH3_PHYPA Predicted protein OS=Physcomitrella paten... 67 6e-10
>tr|A7QKA1|A7QKA1_VITVI Chromosome chr2 scaffold_112, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001037001 PE=4 SV=1 Length = 553
Score = 109 bits (273), Expect = 8e-23 Identities = 55/96 (57%), Positives = 73/96 (76%), Gaps = 1/96 (1%) Frame = +3
Query: 123 VVRINFFRGFQFSVTWWAYTFPMTASTIATINYAVEVRHPITQGMAVVLSCISSVVVMSV 302 VVRINFFRGF+FSV WW+YTFPMT ++ATI YA +V +++G+AV LS +SS +V + Sbjct: 420 VVRINFFRGFRFSVAWWSYTFPMTTVSVATIKYAEQVPSVLSKGLAVFLSFMSSTMVSVL 479
Query: 303 FVATLYHA-VKGNLLPNDVAIAITRKRHKRKQKGSK 407 FV+TL HA V L PND+AIAIT+++H R +K K Sbjct: 480 FVSTLLHAFVWHTLFPNDLAIAITKRKHGRDKKPFK 515
>tr|Q6I589|Q6I589_ORYSJ Os05g0584900 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0009C07.7 PE=2 SV=1 Length = 377
Score = 108 bits (270), Expect = 2e-22 Identities = 62/126 (49%), Positives = 81/126 (64%), Gaps = 9/126 (7%) Frame = +3
Query: 126 VRINFFRGFQFSVTWWAYTFPMTASTIATINYAVEVRHPITQGMAVVLSCISSVVVMSVF 305 VR+N FRGF+FS+ WWAYTFPMT++ IAT+ YA EV + T+ MAV LS I++V V V Sbjct: 233 VRVNMFRGFRFSLAWWAYTFPMTSAAIATVLYASEVTNVATRAMAVGLSGIATVTVTGVL 292
Query: 306 VATLYHA-VKGNLLPNDVAIAITRKRHK-------RKQKGSKVDPL-FEKMSNEDEDDST 458 V T+YHA V+ +L PNDV+IAITR++ K + G+ V L F S DDS Sbjct: 293 VTTMYHAFVRRDLFPNDVSIAITRRKPKFSKILAHLRSSGTDVKELVFSVSSKNGADDSA 352
Query: 459 KLFLAS 476 + AS Sbjct: 353 SVSKAS 358
>tr|A3B790|A3B790_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_018912 PE=4 SV=1 Length = 602
Score = 108 bits (270), Expect = 2e-22 Identities = 62/126 (49%), Positives = 81/126 (64%), Gaps = 9/126 (7%) Frame = +3
Query: 126 VRINFFRGFQFSVTWWAYTFPMTASTIATINYAVEVRHPITQGMAVVLSCISSVVVMSVF 305 VR+N FRGF+FS+ WWAYTFPMT++ IAT+ YA EV + T+ MAV LS I++V V V Sbjct: 458 VRVNMFRGFRFSLAWWAYTFPMTSAAIATVLYASEVTNVATRAMAVGLSGIATVTVTGVL 517
Query: 306 VATLYHA-VKGNLLPNDVAIAITRKRHK-------RKQKGSKVDPL-FEKMSNEDEDDST 458 V T+YHA V+ +L PNDV+IAITR++ K + G+ V L F S DDS Sbjct: 518 VTTMYHAFVRRDLFPNDVSIAITRRKPKFSKILAHLRSSGTDVKELVFSVSSKNGADDSA 577
Query: 459 KLFLAS 476 + AS Sbjct: 578 SVSKAS 583
>tr|Q5ZE68|Q5ZE68_ORYSJ Putative uncharacterized protein P0501G01.17 (Putative uncharacterized protein) (Os01g0623200 protein) OS=Oryza sativa subsp. japonica GN=P0501G01.17 PE=4 SV=1 Length = 686
Score = 106 bits (264), Expect = 9e-22 Identities = 56/106 (52%), Positives = 75/106 (70%), Gaps = 1/106 (0%) Frame = +3
Query: 126 VRINFFRGFQFSVTWWAYTFPMTASTIATINYAVEVRHPITQGMAVVLSCISSVVVMSVF 305 VRINFFRGF+FS+ WWAYTFPMT + IATI YA EV + +T+ +++ LS I++V V + Sbjct: 546 VRINFFRGFRFSLAWWAYTFPMTGAAIATITYATEVTNVLTRALSIGLSGIATVTVAGLL 605
Query: 306 VATLYHA-VKGNLLPNDVAIAITRKRHKRKQKGSKVDPLFEKMSNE 440 V T++HA V +L PNDV+IAITRK K K SK+ F S++ Sbjct: 606 VTTMFHAFVLKDLFPNDVSIAITRK----KPKFSKILAHFRSSSSD 647
>tr|A2WSR8|A2WSR8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_02913 PE=4 SV=1 Length = 638
Score = 106 bits (264), Expect = 9e-22 Identities = 56/106 (52%), Positives = 75/106 (70%), Gaps = 1/106 (0%) Frame = +3
Query: 126 VRINFFRGFQFSVTWWAYTFPMTASTIATINYAVEVRHPITQGMAVVLSCISSVVVMSVF 305 VRINFFRGF+FS+ WWAYTFPMT + IATI YA EV + +T+ +++ LS I++V V + Sbjct: 498 VRINFFRGFRFSLAWWAYTFPMTGAAIATITYATEVTNVLTRALSIGLSGIATVTVAGLL 557
Query: 306 VATLYHA-VKGNLLPNDVAIAITRKRHKRKQKGSKVDPLFEKMSNE 440 V T++HA V +L PNDV+IAITRK K K SK+ F S++ Sbjct: 558 VTTMFHAFVLKDLFPNDVSIAITRK----KPKFSKILAHFRSSSSD 599
>tr|A2Y7Z7|A2Y7Z7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21165 PE=4 SV=1 Length = 619
Score = 105 bits (263), Expect = 1e-21 Identities = 56/96 (58%), Positives = 71/96 (73%), Gaps = 1/96 (1%) Frame = +3
Query: 126 VRINFFRGFQFSVTWWAYTFPMTASTIATINYAVEVRHPITQGMAVVLSCISSVVVMSVF 305 VR+N FRGF+FS+ WWAYTFPMT++ IAT+ YA EV + T+ MAV LS I++V V V Sbjct: 458 VRVNMFRGFRFSLAWWAYTFPMTSAAIATVLYASEVTNVATRAMAVGLSGIATVTVTGVL 517
Query: 306 VATLYHA-VKGNLLPNDVAIAITRKRHKRKQKGSKV 410 V T+YHA V+ +L PNDV+IAITR RK K SK+ Sbjct: 518 VTTMYHAFVRRDLFPNDVSIAITR----RKPKFSKI 549
>tr|B6SWN8|B6SWN8_MAIZE C4-dicarboxylate transporter/malic acid transport protein OS=Zea mays PE=2 SV=1 Length = 634
Score = 102 bits (253), Expect = 2e-20 Identities = 56/112 (50%), Positives = 71/112 (63%), Gaps = 1/112 (0%) Frame = +3
Query: 126 VRINFFRGFQFSVTWWAYTFPMTASTIATINYAVEVRHPITQGMAVVLSCISSVVVMSVF 305 VRINFFRGF+FS+ WWAYTFPMT + IA+I Y+ EV + T+ + V LS I+ + V ++F Sbjct: 519 VRINFFRGFRFSLAWWAYTFPMTGAAIASIRYSTEVDNTFTKALCVALSVIAVLTVTALF 578
Query: 306 VATLYHA-VKGNLLPNDVAIAITRKRHKRKQKGSKVDPLFEKMSNEDEDDST 458 V TL HA V L PND+ IAIT HK K P+ E + ED ST Sbjct: 579 VTTLVHAFVLRKLFPNDICIAIT--DHKMK-------PIMELHESHGEDSST 621
>tr|A7QGD4|A7QGD4_VITVI Chromosome undetermined scaffold_91, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037797001 PE=4 SV=1 Length = 486
Score = 102 bits (253), Expect = 2e-20 Identities = 56/128 (43%), Positives = 83/128 (64%), Gaps = 1/128 (0%) Frame = +3
Query: 126 VRINFFRGFQFSVTWWAYTFPMTASTIATINYAVEVRHPITQGMAVVLSCISSVVVMSVF 305 VR+NFFRGF+FS+ WWAYTFPMT + IATI Y+ EV + +T+ ++V LS I+ + V ++ Sbjct: 353 VRVNFFRGFRFSLAWWAYTFPMTGAAIATIRYSNEVTNIVTRSLSVTLSAIAILTVTALL 412
Query: 306 VATLYHA-VKGNLLPNDVAIAITRKRHKRKQKGSKVDPLFEKMSNEDEDDSTKLFLASEG 482 + T+ HA V +L PND+AIAI+ +R K +K L S+ E ++ F +S+ Sbjct: 413 ITTILHAFVLQDLFPNDIAIAISERRRKTSKKWYH---LRTGSSDTKEIENFLKFGSSDN 469
Query: 483 GTIVASLE 506 I ASL+ Sbjct: 470 KDIEASLK 477
>tr|A2ZQW2|A2ZQW2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_000934 PE=4 SV=1 Length = 636
Score = 100 bits (248), Expect = 7e-20 Identities = 47/101 (46%), Positives = 73/101 (72%), Gaps = 8/101 (7%) Frame = +3
Query: 126 VRINFFRGFQFSVTWWAYTFPMTASTIATINYAVEVRHPITQGMAVVLSCISSVVVMSVF 305 VRIN FRGF+FS+ WWAYTFPMT++ IA+I Y+ EV++ TQ + + LS ++++ V ++F Sbjct: 505 VRINLFRGFRFSLAWWAYTFPMTSAAIASIRYSSEVKNAFTQSLCIALSVLATLTVTALF 564
Query: 306 VATLYH-AVKGNLLPNDVAIAITRKR-------HKRKQKGS 404 + TL H AV +L PND++IAIT ++ H+++Q+ S Sbjct: 565 LTTLLHAAVHRDLFPNDISIAITERKLKPIAEIHEQQQRSS 605
>tr|Q9FLV9|Q9FLV9_ARATH Similarity to unknown protein (At5g24030) OS=Arabidopsis thaliana GN=At5g24030 PE=2 SV=1 Length = 635
Score = 99.8 bits (247), Expect = 9e-20 Identities = 56/114 (49%), Positives = 79/114 (69%), Gaps = 2/114 (1%) Frame = +3
Query: 126 VRINFFRGFQFSVTWWAYTFPMTASTIATINYAVEVRHPITQGMAVVLSCISSVVVMSVF 305 VRINFFRG +FS++WWAYTFPMT + IATI YA V+ +TQ M VVL I+++VV ++ Sbjct: 498 VRINFFRGIKFSLSWWAYTFPMTGAAIATIRYATVVKSTMTQIMCVVLCAIATLVVFALL 557
Query: 306 VATLYHA-VKGNLLPNDVAIAIT-RKRHKRKQKGSKVDPLFEKMSNEDEDDSTK 461 V T+ HA V +L PND+AIAI+ R R K+ + +D L +S+E+ ++ K Sbjct: 558 VTTIIHAFVLRDLFPNDLAIAISNRPRPKQNSQHRWLDQL-RNVSSENIENYLK 610
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