DK943974
Clone id YMU02A01NGRL0004_I24
Library
Length 497
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0004_I24. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
TATCGTAGCGGGTATAGTTTAGTGGTAAAAGTGTGACTCGTCTCGCAGTGATTTTGATAG
TTGAGGGATCGTATCTCGGCTAAATTAACTGAAAGAAAAAAAACTTTATCTTCGCAGAAA
ATATGTGTTTTCTTATTATTTCTCCAAAATTAGAGGTAGATTAATCAATCTCGTCACTCA
TTCATTTCAAGAACTAGGGAAGATAGTGACGAAGCAGAATTGTTTTGGTACCCCAAGAAA
TACTTGGTTTAATTTCTACTTCCGGGGAGATAAATAAAGAAAAAAGTCTATGGGTAGACG
TCTAAGATAGCTGACTCATCGTCACTAAACCTCAGAGAATAAATCTGGGAAAGAAAGTTG
GAATAAATAAATCCGGGTTTGTCAAGATTATTGAACATCTATTTGGTTGAACGGGATCCC
TCGTTTCAACAACTCGGTGAGATATATTTCCCTAAGGGTTTTTTCCTGAAAAAAAAAAAA
AAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id O43114
Definition sp|O43114|ORC5_SCHPO Origin recognition complex subunit 5 OS=Schizosaccharomyces pombe
Align length 57
Score (bit) 29.3
E-value 8.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943974|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_I24, 5'
(468 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O43114|ORC5_SCHPO Origin recognition complex subunit 5 OS=Sch... 29 8.9

>sp|O43114|ORC5_SCHPO Origin recognition complex subunit 5
OS=Schizosaccharomyces pombe GN=orc5 PE=1 SV=2
Length = 455

Score = 29.3 bits (64), Expect = 8.9
Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 8/57 (14%)
Frame = +3

Query: 249 LISTSGEINKEKSLWVDV*DS*LIVTKPQRI--------NLGKKVGINKSGFVKIIE 395
L+ T+ +++KE+++W+++ D + RI ++ K GIN SGF+ ++E
Sbjct: 51 LLRTAFDLSKEENVWINLQDCFTVAHFWYRILIKVGVDKDIALKKGINISGFIYLLE 107


tr_hit_id Q54CB7
Definition tr|Q54CB7|Q54CB7_DICDI Putative uncharacterized protein OS=Dictyostelium discoideum
Align length 55
Score (bit) 32.7
E-value 9.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943974|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_I24, 5'
(468 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q54CB7|Q54CB7_DICDI Putative uncharacterized protein OS=Dicty... 33 9.4

>tr|Q54CB7|Q54CB7_DICDI Putative uncharacterized protein
OS=Dictyostelium discoideum GN=DDB_0191758 PE=4 SV=1
Length = 955

Score = 32.7 bits (73), Expect = 9.4
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +3

Query: 240 ILGLISTSGEINKEKSLWVDV*DS*LIVTKPQRINLGKKVGINKSGFVKIIEHLF 404
I+G ++ SGE+N E ++ DS +T IN+GK IN S + I F
Sbjct: 745 IIGTLNVSGELNSENGQFIFTLDS---LTNSTFINIGKNATINNSTLIIRINQYF 796