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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK943980
Clone id YMU02A01NGRL0004_J10
Library
Length 296
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0004_J10. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GCACAAGCTGACAAATCATTGGGACAGAAGGTTGGAATGCGCCTGAATGTGAAATCAAAC
ATGTAATTTGATCTTGGGCCTCAGATGTGTTCCGAGTGTTAGTTGTAGCAGGATGATCTT
GGAGATGCAATATATTGAGGTGAAGTCATAGATTATGTACATCCTATGATTAGCGCCTTG
GGCTTCTTGTCTCAATGAATGACATGATAGAAGGGTTTTTGTATTTAAGCGAGTGGTCAC
AAAATGGGACTGTAAGCTTACCTGAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P45739
Definition sp|P45739|CATA_HELAN Catalase OS=Helianthus annuus
Align length 20
Score (bit) 33.9
E-value 0.26
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943980|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_J10, 5'
         (264 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P45739|CATA_HELAN Catalase OS=Helianthus annuus PE=2 SV=1           34   0.26 
sp|P48352|CATA3_CUCPE Catalase isozyme 3 OS=Cucurbita pepo GN=CA...    32   1.00 
sp|Q96528|CATA1_ARATH Catalase-1 OS=Arabidopsis thaliana GN=CAT1...    32   1.00 
sp|O24339|CATA_SOLAP Catalase OS=Soldanella alpina PE=2 SV=1           31   1.7  
sp|P49317|CATA3_NICPL Catalase isozyme 3 OS=Nicotiana plumbagini...    31   1.7  
sp|P30567|CATA2_GOSHI Catalase isozyme 2 OS=Gossypium hirsutum G...    31   1.7  
sp|P07145|CATA_IPOBA Catalase OS=Ipomoea batatas PE=2 SV=1             31   2.2  
sp|P48351|CATA2_CUCPE Catalase isozyme 2 OS=Cucurbita pepo GN=CA...    31   2.2  
sp|Q9XHH3|CATA2_SOLLC Catalase isozyme 2 OS=Solanum lycopersicum...    30   2.9  
sp|P49318|CATA2_RICCO Catalase isozyme 2 OS=Ricinus communis GN=...    30   2.9  
sp|P25819|CATA2_ARATH Catalase-2 OS=Arabidopsis thaliana GN=CAT2...    30   2.9  
sp|P49315|CATA1_NICPL Catalase isozyme 1 (Fragment) OS=Nicotiana...    30   2.9  
sp|Q9AXH0|CATA_AVIMR Catalase OS=Avicennia marina PE=2 SV=1            30   3.8  
sp|Q0D9C4|CATA2_ORYSJ Catalase isozyme B OS=Oryza sativa subsp. ...    30   3.8  
sp|A2YH64|CATA2_ORYSI Catalase isozyme B OS=Oryza sativa subsp. ...    30   3.8  
sp|Q9M5L6|CATA_CAPAN Catalase OS=Capsicum annuum GN=CAT PE=2 SV=1      30   5.0  
sp|P55312|CATA2_SOLTU Catalase isozyme 2 OS=Solanum tuberosum GN...    30   5.0  
sp|P49284|CATA1_SOLTU Catalase isozyme 1 OS=Solanum tuberosum GN...    30   5.0  
sp|P30264|CATA1_SOLLC Catalase isozyme 1 OS=Solanum lycopersicum...    30   5.0  
sp|Q01297|CATA1_RICCO Catalase isozyme 1 OS=Ricinus communis GN=...    30   5.0  
sp|P18123|CATA3_MAIZE Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=...    29   6.5  
sp|Q42547|CATA3_ARATH Catalase-3 OS=Arabidopsis thaliana GN=CAT3...    29   6.5  
sp|P32290|CATA_PHAAU Catalase OS=Phaseolus aureus PE=2 SV=1            29   8.5  
sp|Q43206|CATA1_WHEAT Catalase-1 OS=Triticum aestivum GN=CAT1 PE...    29   8.5  

>sp|P45739|CATA_HELAN Catalase OS=Helianthus annuus PE=2 SV=1
          Length = 492

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = +1

Query: 1   AQADKSLGQKVGMRLNVKSN 60
           +QADKSLGQK+  RLNVK N
Sbjct: 472 SQADKSLGQKIASRLNVKPN 491


>sp|P48352|CATA3_CUCPE Catalase isozyme 3 OS=Cucurbita pepo GN=CAT3
           PE=2 SV=1
          Length = 492

 Score = 32.0 bits (71), Expect = 1.00
 Identities = 13/21 (61%), Positives = 18/21 (85%)
 Frame = +1

Query: 1   AQADKSLGQKVGMRLNVKSNM 63
           +QAD+SLGQK+  RLNV+ N+
Sbjct: 472 SQADRSLGQKIASRLNVRPNI 492


>sp|Q96528|CATA1_ARATH Catalase-1 OS=Arabidopsis thaliana GN=CAT1
           PE=1 SV=3
          Length = 492

 Score = 32.0 bits (71), Expect = 1.00
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = +1

Query: 1   AQADKSLGQKVGMRLNVKSN 60
           +QADKSLGQK+  RLNV+ N
Sbjct: 472 SQADKSLGQKLATRLNVRPN 491


>sp|O24339|CATA_SOLAP Catalase OS=Soldanella alpina PE=2 SV=1
          Length = 492

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/20 (70%), Positives = 16/20 (80%)
 Frame = +1

Query: 4   QADKSLGQKVGMRLNVKSNM 63
           QADKSLGQK+  RLNV+  M
Sbjct: 473 QADKSLGQKLASRLNVRPTM 492


>sp|P49317|CATA3_NICPL Catalase isozyme 3 OS=Nicotiana
           plumbaginifolia GN=CAT3 PE=2 SV=1
          Length = 492

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +1

Query: 1   AQADKSLGQKVGMRLNVKSNM 63
           +QADK+LGQK+  RLNV+  M
Sbjct: 472 SQADKTLGQKIASRLNVRPTM 492


>sp|P30567|CATA2_GOSHI Catalase isozyme 2 OS=Gossypium hirsutum
           GN=CAT2 PE=2 SV=1
          Length = 492

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 13/21 (61%), Positives = 18/21 (85%)
 Frame = +1

Query: 1   AQADKSLGQKVGMRLNVKSNM 63
           +QADKSLGQK+  RLNV+ ++
Sbjct: 472 SQADKSLGQKIASRLNVRPSI 492


>sp|P07145|CATA_IPOBA Catalase OS=Ipomoea batatas PE=2 SV=1
          Length = 492

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = +1

Query: 4   QADKSLGQKVGMRLNVKSNM 63
           QAD+SLGQKV  RLN++  M
Sbjct: 473 QADRSLGQKVASRLNIRPTM 492


>sp|P48351|CATA2_CUCPE Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2
           PE=2 SV=1
          Length = 492

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +1

Query: 4   QADKSLGQKVGMRLNVKSNM 63
           QAD+SLGQK+  R+N + NM
Sbjct: 473 QADRSLGQKIASRMNARPNM 492


>sp|Q9XHH3|CATA2_SOLLC Catalase isozyme 2 OS=Solanum lycopersicum
           GN=CAT2 PE=2 SV=1
          Length = 492

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 13/21 (61%), Positives = 18/21 (85%)
 Frame = +1

Query: 1   AQADKSLGQKVGMRLNVKSNM 63
           +QADKSLGQK+  RLNV+ ++
Sbjct: 472 SQADKSLGQKLASRLNVRPSI 492


>sp|P49318|CATA2_RICCO Catalase isozyme 2 OS=Ricinus communis
           GN=CAT2 PE=2 SV=1
          Length = 492

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = +1

Query: 4   QADKSLGQKVGMRLNVKSNM 63
           Q DKSLGQK+  RLNV+ N+
Sbjct: 473 QCDKSLGQKLASRLNVRPNI 492
tr_hit_id B8YBE1
Definition tr|B8YBE1|B8YBE1_PICGL Catalase OS=Picea glauca
Align length 21
Score (bit) 34.3
E-value 3.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943980|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_J10, 5'
         (264 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8YBE1|B8YBE1_PICGL Catalase OS=Picea glauca GN=CAT PE=2 SV=1       34   3.2  
tr|A9NUZ2|A9NUZ2_PICSI Catalase OS=Picea sitchensis PE=2 SV=1          34   3.2  
tr|B1PYP2|B1PYP2_PINSY Catalase OS=Pinus sylvestris PE=2 SV=1          34   4.1  
tr|Q84XZ9|Q84XZ9_HYPPE Catalase OS=Hypericum perforatum GN=cat1 ...    33   5.4  
tr|B8XYC4|B8XYC4_9ROSI Catalase OS=Dimocarpus longan GN=CAT PE=2...    33   7.1  
tr|A6N6L1|A6N6L1_LITCN Catalase OS=Litchi chinensis GN=CAT PE=2 ...    33   7.1  
tr|Q8L7J7|Q8L7J7_CAPAN Catalase OS=Capsicum annuum GN=CAT3 PE=2 ...    33   9.2  

>tr|B8YBE1|B8YBE1_PICGL Catalase OS=Picea glauca GN=CAT PE=2 SV=1
          Length = 492

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +1

Query: 1   AQADKSLGQKVGMRLNVKSNM 63
           +Q+DKSLGQK+  RLN+K+NM
Sbjct: 472 SQSDKSLGQKIAARLNMKANM 492


>tr|A9NUZ2|A9NUZ2_PICSI Catalase OS=Picea sitchensis PE=2 SV=1
          Length = 492

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +1

Query: 1   AQADKSLGQKVGMRLNVKSNM 63
           +Q+DKSLGQK+  RLN+K+NM
Sbjct: 472 SQSDKSLGQKIAARLNMKANM 492


>tr|B1PYP2|B1PYP2_PINSY Catalase OS=Pinus sylvestris PE=2 SV=1
          Length = 492

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = +1

Query: 1   AQADKSLGQKVGMRLNVKSNM 63
           +Q DKSLGQK+  RLN+K+NM
Sbjct: 472 SQCDKSLGQKIAARLNMKANM 492


>tr|Q84XZ9|Q84XZ9_HYPPE Catalase OS=Hypericum perforatum GN=cat1
           PE=2 SV=1
          Length = 492

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = +1

Query: 4   QADKSLGQKVGMRLNVKSNM 63
           QADKSLGQK+  RLNV+ NM
Sbjct: 473 QADKSLGQKLASRLNVRPNM 492


>tr|B8XYC4|B8XYC4_9ROSI Catalase OS=Dimocarpus longan GN=CAT PE=2
           SV=1
          Length = 291

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = +1

Query: 1   AQADKSLGQKVGMRLNVKSNM 63
           +QADKSLGQK+  RLNV+ N+
Sbjct: 271 SQADKSLGQKIASRLNVRPNI 291


>tr|A6N6L1|A6N6L1_LITCN Catalase OS=Litchi chinensis GN=CAT PE=2
           SV=1
          Length = 291

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = +1

Query: 1   AQADKSLGQKVGMRLNVKSNM 63
           +QADKSLGQK+  RLNV+ N+
Sbjct: 271 SQADKSLGQKIASRLNVRPNI 291


>tr|Q8L7J7|Q8L7J7_CAPAN Catalase OS=Capsicum annuum GN=CAT3 PE=2
           SV=1
          Length = 492

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = +1

Query: 1   AQADKSLGQKVGMRLNVKSNM 63
           +QADKSLGQK+  RLNVK  M
Sbjct: 472 SQADKSLGQKLASRLNVKPTM 492