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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK943984
Clone id YMU02A01NGRL0004_J17
Library
Length 439
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0004_J17. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence 
AGTTCTCTCAACTGTCTGTCTTGTGATCTCCCTGATCATCTCTAGACCGGTGGTAACAAT
GGCGAGCTCTGTGGCTTCTTTGGCACTTGCTGCTCCCTCGTGCGACACGCCATATAGCAT
ATCTTACAGCTTCTCCGGCCTCACGCCCACTACCCTCGCTACCCCCAACAGCGTCTACCC
CCTCTCCATCTCCCACGGGAGCCCCGTGATCGCCATGCTTGTGTGGAACCCCTATAACAA
CAAGAATTTCTAGACTCTGTCCTACTTGACGCCTTTGACAATCGAGAAGATTGCGAACCA
CGTGGACTTCATGGTCTGGAACGGCTGGACCCCCTGCAATGAGTTCGACAAAATCTAAAG
CGTATACTTAGATCACTTCCATGACAACGACTACCAATATTGGCTAAACTGGATGATGTG
CAAGTTGCCCATGTTTGAC
■■Homology search results ■■ -
sp_hit_id O48550
Definition sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zantedeschia aethiopica
Align length 109
Score (bit) 77.0
E-value 3.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943984|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_J17, 5'
         (439 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...    77   3e-14
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...    76   7e-14
sp|Q41373|RBS_SACHY Ribulose bisphosphate carboxylase small chai...    75   1e-13
sp|P26985|RBS_BATOE Ribulose bisphosphate carboxylase small chai...    74   3e-13
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...    73   5e-13
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...    73   5e-13
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...    73   5e-13
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...    73   6e-13
sp|P00873|RBS1_CHLRE Ribulose bisphosphate carboxylase small cha...    72   8e-13
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...    72   1e-12
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...    72   1e-12
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...    72   1e-12
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...    71   2e-12
sp|P08475|RBS2_CHLRE Ribulose bisphosphate carboxylase small cha...    70   3e-12
sp|P29684|RBS_HEVBR Ribulose bisphosphate carboxylase small chai...    70   4e-12
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...    69   7e-12
sp|Q42915|RBS_MANES Ribulose bisphosphate carboxylase small chai...    69   7e-12
sp|Q38693|RBS7_ACECL Ribulose bisphosphate carboxylase small cha...    69   7e-12
sp|Q38692|RBS6_ACECL Ribulose bisphosphate carboxylase small cha...    69   7e-12
sp|P16133|RBS5_ACECL Ribulose bisphosphate carboxylase small cha...    69   7e-12
sp|P16132|RBS4_ACECL Ribulose bisphosphate carboxylase small cha...    69   7e-12
sp|P16131|RBS3_ACECL Ribulose bisphosphate carboxylase small cha...    69   7e-12
sp|P18566|RBS2_ORYSJ Ribulose bisphosphate carboxylase small cha...    69   7e-12
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...    69   7e-12
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...    69   9e-12
sp|O22077|RBS_FAGCR Ribulose bisphosphate carboxylase small chai...    69   9e-12
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...    69   1e-11
sp|P26573|RBS8_NICPL Ribulose bisphosphate carboxylase small cha...    69   1e-11
sp|Q08186|RBS6_MESCR Ribulose bisphosphate carboxylase small cha...    69   1e-11
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...    69   1e-11

>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 43/109 (39%), Positives = 58/109 (53%)
 Frame = +2

Query: 110 PYSISYSFSGLTPTTLATPNSVYPLSISHGSPVIAMLVWNPYNNKNF*TLSYLTPLTIEK 289
           P++  +S +    T     +S  P   S+G  V  M VW P   K F TLSYL PLT E+
Sbjct: 25  PFAGLHSSAAFPVTRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQ 81

Query: 290 IANHVDFMVWNGWTPCNEFDKI*SVYLDHFHDNDYQYWLNWMMCKLPMF 436
           +   VD+++ NGW PC EF K+  VY ++ +   Y     W M KLPMF
Sbjct: 82  LGQEVDYLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMF 130


>sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1
          Length = 170

 Score = 75.9 bits (185), Expect = 7e-14
 Identities = 36/84 (42%), Positives = 49/84 (58%)
 Frame = +2

Query: 185 SISHGSPVIAMLVWNPYNNKNF*TLSYLTPLTIEKIANHVDFMVWNGWTPCNEFDKI*SV 364
           ++S+G  +  M VW  Y NK F TLSYL PL+ + +   VD+++ NGW PC EF K+  V
Sbjct: 38  NVSNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQVDYLLRNGWIPCLEFSKVGFV 97

Query: 365 YLDHFHDNDYQYWLNWMMCKLPMF 436
           Y ++     Y     W M KLPMF
Sbjct: 98  YRENSTSPCYYDGRYWTMWKLPMF 121


>sp|Q41373|RBS_SACHY Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Saccharum hybrid GN=RBCS PE=3 SV=1
          Length = 168

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 42/105 (40%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
 Frame = +2

Query: 131 FSGLTPTT---LATPNSVYPLSISHGSPVIAMLVWNPYNNKNF*TLSYLTPLTIEKIANH 301
           F GL  T    +A  ++     +S+G  +  M VW  Y NK F TLSYL PLT E++   
Sbjct: 16  FQGLKSTASLPVARRSTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYLPPLTQEQLLKQ 75

Query: 302 VDFMVWNGWTPCNEFDKI*SVYLDHFHDNDYQYWLNWMMCKLPMF 436
           VD+++ N W PC EF K   VY ++     Y     W M KLPMF
Sbjct: 76  VDYLLRNNWVPCLEFSKEGFVYRENSTSPCYYDGRYWTMWKLPMF 120


>sp|P26985|RBS_BATOE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Batophora oerstedii GN=RBCS PE=2 SV=2
          Length = 175

 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 44/106 (41%), Positives = 55/106 (51%), Gaps = 14/106 (13%)
 Frame = +2

Query: 161 TPNSVYPLSISHG--SPVIAMLVWNPYNNKNF*TLSYLTPLTIEKIANHVDFMVWNGWTP 334
           T   V P  +S+G  S   AM+VW P+NNK F T SYL PLT ++I   VD+++ N WTP
Sbjct: 16  TKQIVRPRFLSNGTISKSRAMMVWEPFNNKFFETFSYLPPLTDDQITKQVDYILRNNWTP 75

Query: 335 CNEFDKI*SVYLDH------------FHDNDYQYWLNWMMCKLPMF 436
           C EF      Y+ H            + DN Y     W M KLPMF
Sbjct: 76  CLEFAGSDQAYVTHDNTVRMGDCASTYQDNRY-----WTMWKLPMF 116


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score = 73.2 bits (178), Expect = 5e-13
 Identities = 41/97 (42%), Positives = 51/97 (52%)
 Frame = +2

Query: 146 PTTLATPNSVYPLSISHGSPVIAMLVWNPYNNKNF*TLSYLTPLTIEKIANHVDFMVWNG 325
           P T    N +  L  S+G  V  M VW P   K F TLSYL PL++E +A  VD+++ N 
Sbjct: 36  PATRKANNDLSTLP-SNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRND 94

Query: 326 WTPCNEFDKI*SVYLDHFHDNDYQYWLNWMMCKLPMF 436
           W PC EF K   VY ++     Y     W M KLPMF
Sbjct: 95  WVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMF 131


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score = 73.2 bits (178), Expect = 5e-13
 Identities = 41/97 (42%), Positives = 51/97 (52%)
 Frame = +2

Query: 146 PTTLATPNSVYPLSISHGSPVIAMLVWNPYNNKNF*TLSYLTPLTIEKIANHVDFMVWNG 325
           P T    N +  L  S+G  V  M VW P   K F TLSYL PL++E +A  VD+++ N 
Sbjct: 36  PATRKANNDLSTLP-SNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRND 94

Query: 326 WTPCNEFDKI*SVYLDHFHDNDYQYWLNWMMCKLPMF 436
           W PC EF K   VY ++     Y     W M KLPMF
Sbjct: 95  WVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMF 131


>sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1
          Length = 177

 Score = 73.2 bits (178), Expect = 5e-13
 Identities = 41/97 (42%), Positives = 51/97 (52%)
 Frame = +2

Query: 146 PTTLATPNSVYPLSISHGSPVIAMLVWNPYNNKNF*TLSYLTPLTIEKIANHVDFMVWNG 325
           P T    N +  L  S+G  V  M VW P   K F TLSYL PL++E +A  VD+++ N 
Sbjct: 36  PATRKANNDLSTLP-SNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRND 94

Query: 326 WTPCNEFDKI*SVYLDHFHDNDYQYWLNWMMCKLPMF 436
           W PC EF K   VY ++     Y     W M KLPMF
Sbjct: 95  WVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMF 131


>sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1
          Length = 177

 Score = 72.8 bits (177), Expect = 6e-13
 Identities = 37/82 (45%), Positives = 46/82 (56%)
 Frame = +2

Query: 191 SHGSPVIAMLVWNPYNNKNF*TLSYLTPLTIEKIANHVDFMVWNGWTPCNEFDKI*SVYL 370
           S+G  V  M VW P   K F TLSYL PL++E +A  VD+++ N W PC EF K   VY 
Sbjct: 50  SNGGKVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 371 DHFHDNDYQYWLNWMMCKLPMF 436
           ++     Y     W M KLPMF
Sbjct: 110 ENHASPGYYDGRYWTMWKLPMF 131


>sp|P00873|RBS1_CHLRE Ribulose bisphosphate carboxylase small chain
           1, chloroplastic OS=Chlamydomonas reinhardtii GN=RBCS-1
           PE=1 SV=1
          Length = 185

 Score = 72.4 bits (176), Expect = 8e-13
 Identities = 39/86 (45%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
 Frame = +2

Query: 215 MLVWNPYNNKNF*TLSYLTPLTIEKIANHVDFMVWNGWTPCNEFDKI*SVYLDH------ 376
           M+VW P NNK F T SYL PLT E+IA  VD++V NGW PC EF +    Y+ +      
Sbjct: 46  MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRF 105

Query: 377 ------FHDNDYQYWLNWMMCKLPMF 436
                 ++DN Y     W M KLPMF
Sbjct: 106 GSVSCLYYDNRY-----WTMWKLPMF 126


>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1
          Length = 180

 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 36/82 (43%), Positives = 48/82 (58%)
 Frame = +2

Query: 191 SHGSPVIAMLVWNPYNNKNF*TLSYLTPLTIEKIANHVDFMVWNGWTPCNEFDKI*SVYL 370
           ++GS V  M VW PYNN  F TLSYL PL+ + +A  +D+++ +GW PC EFD   +V  
Sbjct: 51  TNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDVQGTVTR 110

Query: 371 DHFHDNDYQYWLNWMMCKLPMF 436
           +      Y     W M KLPMF
Sbjct: 111 EGSTMPGYYDGRYWTMWKLPMF 132
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 107
Score (bit) 125.0
E-value 8.0e-28
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943984|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_J17, 5'
         (439 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   125   8e-28
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...    85   2e-15
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...    79   1e-13
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...    79   1e-13
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...    77   3e-13
tr|A9U380|A9U380_PHYPA Ribulose bisphosphate carboxylase small c...    77   3e-13
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...    77   3e-13
tr|Q5VBK1|Q5VBK1_DUNTE Ribulose bisphosphate carboxylase small c...    77   4e-13
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...    77   4e-13
tr|Q5VBK0|Q5VBK0_DUNTE Ribulose bisphosphate carboxylase small c...    76   7e-13
tr|B4FSJ3|B4FSJ3_MAIZE Putative uncharacterized protein OS=Zea m...    76   9e-13
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...    76   9e-13
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...    75   1e-12
tr|O24574|O24574_MAIZE Ribulose bisphosphate carboxylase small c...    75   1e-12
tr|Q84U91|Q84U91_VOLCA Ribulose bisphosphate carboxylase small c...    75   2e-12
tr|Q84U90|Q84U90_VOLCA Ribulose bisphosphate carboxylase small c...    74   4e-12
tr|B6RHQ4|B6RHQ4_9POAL Chloroplast ribulose-1,5-bisphosphate car...    74   4e-12
tr|B6RHQ3|B6RHQ3_9POAL Chloroplast ribulose-1,5-bisphosphate car...    74   4e-12
tr|B3VSA1|B3VSA1_9CHLO Chloroplast ribulose 1,5-bisphosphate car...    74   4e-12
tr|Q5XR40|Q5XR40_DUNSA Ribulose bisphosphate carboxylase small c...    74   5e-12
tr|Q84U92|Q84U92_VOLCA Ribulose bisphosphate carboxylase small c...    73   8e-12
tr|A8JGP9|A8JGP9_CHLRE Ribulose bisphosphate carboxylase small c...    72   1e-11
tr|A7YVW5|A7YVW5_ACTDE Ribulose bisphosphate carboxylase small c...    72   1e-11
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...    71   3e-11
tr|B7FHB2|B7FHB2_MEDTR Putative uncharacterized protein OS=Medic...    71   3e-11
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...    71   3e-11
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...    70   4e-11
tr|Q30CC3|Q30CC3_HAEPL Ribulose bisphosphate carboxylase small c...    70   4e-11
tr|B7ZYT6|B7ZYT6_MAIZE Putative uncharacterized protein OS=Zea m...    70   4e-11
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...    70   4e-11

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  125 bits (315), Expect = 8e-28
 Identities = 62/107 (57%), Positives = 74/107 (69%)
 Frame = +2

Query: 116 SISYSFSGLTPTTLATPNSVYPLSISHGSPVIAMLVWNPYNNKNF*TLSYLTPLTIEKIA 295
           S+S SFSGL   TL  P    PL+IS+GS + AMLVW PY+NK F TLSYL PLT ++IA
Sbjct: 21  SLSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIA 80

Query: 296 NHVDFMVWNGWTPCNEFDKI*SVYLDHFHDNDYQYWLNWMMCKLPMF 436
             V++MV  GWTPC EFD I SVY +HFH + Y     W+M KLPMF
Sbjct: 81  KQVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMF 127


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
           chain OS=Populus trichocarpa PE=2 SV=1
          Length = 170

 Score = 85.1 bits (209), Expect = 2e-15
 Identities = 45/100 (45%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
 Frame = +2

Query: 143 TPTTLATPNSVYPLS--ISHGSPVIAMLVWNPYNNKNF*TLSYLTPLTIEKIANHVDFMV 316
           T    AT NSV   S  +S+GS    M  WNP NNK F  LSYL PL+ + IA  +D+M+
Sbjct: 24  TKQPFATKNSVARSSRTVSNGSKTFCMKTWNPINNKKFEALSYLPPLSEDSIAKEIDYMM 83

Query: 317 WNGWTPCNEFDKI*SVYLDHFHDNDYQYWLNWMMCKLPMF 436
             GW PC EFD++ SV  +H     Y     W + KLPMF
Sbjct: 84  KKGWIPCLEFDEVGSVRREHSRMPGYYDGRYWTLWKLPMF 123


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score = 78.6 bits (192), Expect = 1e-13
 Identities = 46/105 (43%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
 Frame = +2

Query: 131 FSGLTPTTLATPNSVYPLSISHGSPVIAMLVWNPYNNKNF*TLSYLTPLTIEKIANHVDF 310
           FSGL  TTL+   +    S+ +GS V  M VWNP     F T SYL PLT ++IA  VDF
Sbjct: 29  FSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDF 88

Query: 311 MVWNGWTPCNEFDKI*SVYLDHFH---DNDYQYWLNWMMCKLPMF 436
           M+     PC EFD + SV   +F     + Y     W M KLPMF
Sbjct: 89  MIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMF 133


>tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small
           chain OS=Vitis vinifera GN=GSVIVT00031354001 PE=3 SV=1
          Length = 169

 Score = 78.6 bits (192), Expect = 1e-13
 Identities = 37/84 (44%), Positives = 50/84 (59%)
 Frame = +2

Query: 185 SISHGSPVIAMLVWNPYNNKNF*TLSYLTPLTIEKIANHVDFMVWNGWTPCNEFDKI*SV 364
           ++S+GS    M  WNP NNK F TLSYL PL+ + IA  +D+M+  GW PC EFD++  V
Sbjct: 38  TVSNGSKTHCMKTWNPINNKKFETLSYLPPLSDDSIAKEIDYMLKKGWIPCLEFDEVGYV 97

Query: 365 YLDHFHDNDYQYWLNWMMCKLPMF 436
           +  +     Y     W + KLPMF
Sbjct: 98  FRKNSQIPGYYDGRYWTLWKLPMF 121


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 45/109 (41%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
 Frame = +2

Query: 128 SFSGLTPTTLATPNSVYPLSISHGSPVIAMLVWNPYNNKNF*TLSYLTPLTIEKIANHVD 307
           +FSGL   TL T  S    S+ +GS V  M VWNP     F T SYL PL+ ++IA  VD
Sbjct: 33  AFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQVD 92

Query: 308 FMVWNGWTPCNEFDKI*SVYLDHFHDN------DYQYWLNWMMCKLPMF 436
           +M+     PC EFD + +V   +F  +      D +YW  W   KLPMF
Sbjct: 93  YMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMW---KLPMF 138


>tr|A9U380|A9U380_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_8310 PE=3 SV=1
          Length = 156

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 45/109 (41%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
 Frame = +2

Query: 128 SFSGLTPTTLATPNSVYPLSISHGSPVIAMLVWNPYNNKNF*TLSYLTPLTIEKIANHVD 307
           +FSGL   TL T  S    S+ +GS V  M VWNP     F T SYL PL+ ++IA  VD
Sbjct: 37  AFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQVD 96

Query: 308 FMVWNGWTPCNEFDKI*SVYLDHFHDN------DYQYWLNWMMCKLPMF 436
           +M+     PC EFD + +V   +F  +      D +YW  W   KLPMF
Sbjct: 97  YMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMW---KLPMF 142


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 46/105 (43%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
 Frame = +2

Query: 131 FSGLTPTTLATPNSVYPLSISHGSPVIAMLVWNPYNNKNF*TLSYLTPLTIEKIANHVDF 310
           FSGL  TTL    +    S+ +GS V  M VWNP     F T SYL PLT ++IA  VDF
Sbjct: 29  FSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDF 88

Query: 311 MVWNGWTPCNEFDKI*SVYLDHFH---DNDYQYWLNWMMCKLPMF 436
           M+     PC EFD + SV   +F     + Y     W M KLPMF
Sbjct: 89  MIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMF 133


>tr|Q5VBK1|Q5VBK1_DUNTE Ribulose bisphosphate carboxylase small
           chain OS=Dunaliella tertiolecta GN=rbcS1 PE=3 SV=1
          Length = 189

 Score = 77.0 bits (188), Expect = 4e-13
 Identities = 40/86 (46%), Positives = 50/86 (58%), Gaps = 12/86 (13%)
 Frame = +2

Query: 215 MLVWNPYNNKNF*TLSYLTPLTIEKIANHVDFMVWNGWTPCNEFDKI*SVYLD------- 373
           M+VWNP NNK F T SYL PLT ++IA  VD++V NGWTPC EF +    Y+        
Sbjct: 47  MMVWNPINNKQFETFSYLPPLTADQIAKQVDYIVNNGWTPCLEFAEQNQAYVSSDSAVRF 106

Query: 374 -----HFHDNDYQYWLNWMMCKLPMF 436
                +++DN Y     W M KLPMF
Sbjct: 107 GAVSANYYDNRY-----WTMWKLPMF 127


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score = 77.0 bits (188), Expect = 4e-13
 Identities = 44/106 (41%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
 Frame = +2

Query: 128 SFSGLTPTTLATPNSVYPLSISHGSPVIAMLVWNPYNNKNF*TLSYLTPLTIEKIANHVD 307
           +FSGL P TL +  +    ++ +GS V  M VWNP     F T SYL PLT ++IA  VD
Sbjct: 33  AFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVD 92

Query: 308 FMVWNGWTPCNEFDKI*SVYLDHFH---DNDYQYWLNWMMCKLPMF 436
           +M+     PC EFD + SV   +F     + Y     W M KLPMF
Sbjct: 93  YMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMF 138


>tr|Q5VBK0|Q5VBK0_DUNTE Ribulose bisphosphate carboxylase small
           chain OS=Dunaliella tertiolecta GN=rbcS2 PE=3 SV=1
          Length = 188

 Score = 76.3 bits (186), Expect = 7e-13
 Identities = 44/113 (38%), Positives = 58/113 (51%), Gaps = 12/113 (10%)
 Frame = +2

Query: 134 SGLTPTTLATPNSVYPLSISHGSPVIAMLVWNPYNNKNF*TLSYLTPLTIEKIANHVDFM 313
           + L P   A P +  P   ++      M+VW P NNK F T SYL PLT ++IA  VD++
Sbjct: 24  ASLKPAVRAVPKAQAPAVRAN-----QMMVWQPINNKQFETFSYLPPLTADQIARQVDYI 78

Query: 314 VWNGWTPCNEFDKI*SVYLD------------HFHDNDYQYWLNWMMCKLPMF 436
           V NGWTPC EF +    Y+             +++DN Y     W M KLPMF
Sbjct: 79  VENGWTPCLEFAEEGQAYVSSDSAVRFGAVSANYYDNRY-----WTMWKLPMF 126