BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943986|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_J19, 5'
         (334 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P33434|MMP2_MOUSE 72 kDa type IV collagenase OS=Mus musculus ...    31   1.7  
sp|P08253|MMP2_HUMAN 72 kDa type IV collagenase OS=Homo sapiens ...    31   1.7  
sp|Q9GLE5|MMP2_BOVIN 72 kDa type IV collagenase OS=Bos taurus GN...    31   1.7  
sp|P33436|MMP2_RAT 72 kDa type IV collagenase OS=Rattus norvegic...    31   2.2  
sp|P50757|MMP2_RABIT 72 kDa type IV collagenase OS=Oryctolagus c...    29   6.4  

>sp|P33434|MMP2_MOUSE 72 kDa type IV collagenase OS=Mus musculus
           GN=Mmp2 PE=2 SV=1
          Length = 662

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -1

Query: 145 WRNNKKTHIFCEDKVFFFQLI*PRYDPSTIKITARRVTFLPLN 17
           W  NKKT+IF  DK + +  +  + DP   K+ A     +P N
Sbjct: 576 WSKNKKTYIFAGDKFWRYNEVKKKMDPGFPKLIADSWNAIPDN 618


>sp|P08253|MMP2_HUMAN 72 kDa type IV collagenase OS=Homo sapiens
           GN=MMP2 PE=1 SV=2
          Length = 660

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -1

Query: 145 WRNNKKTHIFCEDKVFFFQLI*PRYDPSTIKITARRVTFLPLN 17
           W  NKKT+IF  DK + +  +  + DP   K+ A     +P N
Sbjct: 574 WSKNKKTYIFAGDKFWRYNEVKKKMDPGFPKLIADAWNAIPDN 616


>sp|Q9GLE5|MMP2_BOVIN 72 kDa type IV collagenase OS=Bos taurus
           GN=MMP2 PE=2 SV=1
          Length = 661

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -1

Query: 145 WRNNKKTHIFCEDKVFFFQLI*PRYDPSTIKITARRVTFLPLN 17
           W  NKKT+IF  DK + +  +  + DP   K+ A     +P N
Sbjct: 575 WSKNKKTYIFAGDKFWRYNEVKKKMDPGFPKLIADAWNAIPDN 617


>sp|P33436|MMP2_RAT 72 kDa type IV collagenase OS=Rattus norvegicus
           GN=Mmp2 PE=2 SV=2
          Length = 662

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -1

Query: 145 WRNNKKTHIFCEDKVFFFQLI*PRYDPSTIKITARRVTFLPLN 17
           W  NKKT+IF  DK + +  +  + DP   K+ A     +P N
Sbjct: 576 WSKNKKTYIFSGDKFWRYNEVKKKMDPGFPKLIADSWNAIPDN 618


>sp|P50757|MMP2_RABIT 72 kDa type IV collagenase OS=Oryctolagus
           cuniculus GN=MMP2 PE=2 SV=1
          Length = 662

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -1

Query: 145 WRNNKKTHIFCEDKVFFFQLI*PRYDPSTIKITARRVTFLP 23
           W  NKKT+IF  DK + +  +  + DP   ++ A     +P
Sbjct: 576 WSKNKKTYIFAGDKFWRYNEVKKKMDPGFPRLIADAWNAIP 616

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943986|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_J19, 5'
         (334 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******