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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK944025
Clone id YMU02A01NGRL0004_L23
Library
Length 300
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0004_L23. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GAAGCAGTGGTATCAACGCATAGTGGCCATTACGGCCGGGCATGAAGGTTGCAAAGGATG
ATGTGATGAAAATCAGCTTTGCAGGGTTGAAGCACCTAGTCCTTGAAGCTGTCGCATTTG
GCAGTTTCTTATGGGATGTCTAATGCTATGTAGATGCGTCTTACGCTTTTGTATGATTTG
CATGAACAGTGCATCCAGCTTTTCAATATTCTATTGTTAATGTGCATAAGTGGAAGTTTA
AGGCTCCTTGACATCCTTGACTTATGGGAGATAAATAAAGAAAAAAATCTATGGGCATGT
■■Homology search results ■■ -
sp_hit_id Q6FRU4
Definition sp|Q6FRU4|ATG21_CANGA Autophagy-related protein 21 OS=Candida glabrata
Align length 34
Score (bit) 29.6
E-value 4.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944025|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_L23, 5'
         (260 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6FRU4|ATG21_CANGA Autophagy-related protein 21 OS=Candida gl...    30   4.8  

>sp|Q6FRU4|ATG21_CANGA Autophagy-related protein 21 OS=Candida
           glabrata GN=ATG21 PE=3 SV=1
          Length = 453

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 150 CIQLFNILLLMCISGSLRLLDILDLWEINKEKNL 251
           C+ L N  + +     ++L++ LDLWE N E NL
Sbjct: 123 CVLLDNDQIFIYDISCMKLMETLDLWESNNEGNL 156
tr_hit_id A9PF86
Definition tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Populus trichocarpa
Align length 41
Score (bit) 62.0
E-value 1.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944025|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_L23, 5'
         (260 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Popul...    62   1e-08
tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, who...    60   4e-08
tr|A5BZG6|A5BZG6_VITVI Putative uncharacterized protein OS=Vitis...    60   4e-08
tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized p...    59   9e-08
tr|Q9AT51|Q9AT51_BRANA Putative uncharacterized protein (Fragmen...    59   9e-08
tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g1780...    59   9e-08
tr|Q56ZA5|Q56ZA5_ARATH Putative uncharacterized protein At3g1780...    59   9e-08
tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g1780...    59   9e-08
tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein...    58   2e-07
tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea...    58   2e-07
tr|B6TEU7|B6TEU7_MAIZE Putative uncharacterized protein OS=Zea m...    58   3e-07
tr|B4G0A9|B4G0A9_MAIZE Putative uncharacterized protein OS=Zea m...    58   3e-07
tr|Q10DW0|Q10DW0_ORYSJ Os03g0717900 protein OS=Oryza sativa subs...    57   4e-07
tr|Q10DV9|Q10DV9_ORYSJ cDNA clone:001-023-C09, full insert seque...    57   4e-07
tr|A6N1R0|A6N1R0_ORYSI Putative uncharacterized protein (Fragmen...    57   4e-07
tr|A3AM41|A3AM41_ORYSJ Putative uncharacterized protein OS=Oryza...    57   4e-07
tr|A2XLF0|A2XLF0_ORYSI Putative uncharacterized protein OS=Oryza...    57   4e-07
tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Popul...    57   5e-07
tr|B7FJF5|B7FJF5_MEDTR Putative uncharacterized protein OS=Medic...    56   8e-07
tr|Q14K79|Q14K79_PLAAC Putative uncharacterized protein (Fragmen...    55   1e-06
tr|A7PSL3|A7PSL3_VITVI Chromosome chr6 scaffold_28, whole genome...    54   5e-06
tr|A5BNG8|A5BNG8_VITVI Putative uncharacterized protein OS=Vitis...    54   5e-06
tr|A7PC12|A7PC12_VITVI Chromosome chr2 scaffold_11, whole genome...    53   9e-06
tr|A5AE17|A5AE17_VITVI Putative uncharacterized protein OS=Vitis...    53   9e-06
tr|Q9FVR1|Q9FVR1_ARATH Putative uncharacterized protein F3C3.6 (...    51   3e-05
tr|B6UFZ7|B6UFZ7_MAIZE Putative uncharacterized protein OS=Zea m...    49   1e-04
tr|Q9S7A6|Q9S7A6_ARATH T1B9.2 protein (Putative uncharacterized ...    49   1e-04
tr|Q56ZJ5|Q56ZJ5_ARATH Putative uncharacterized protein At3g0731...    49   1e-04
tr|A7R5P9|A7R5P9_VITVI Chromosome undetermined scaffold_1021, wh...    49   2e-04
tr|B8LKC1|B8LKC1_PICSI Putative uncharacterized protein OS=Picea...    47   4e-04

>tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 401

 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 29/41 (70%), Positives = 34/41 (82%)
 Frame = +2

Query: 11  AKDDVMKISFAGLKHLVLEAVAFGSFLWDV*CYVDASYAFV 133
           +KD+++KISF GLK LVLEAV FGSFLWDV  YVD+ Y FV
Sbjct: 359 SKDELVKISFGGLKRLVLEAVTFGSFLWDVESYVDSRYHFV 399


>tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00006608001 PE=4 SV=1
          Length = 362

 Score = 60.5 bits (145), Expect = 4e-08
 Identities = 28/41 (68%), Positives = 34/41 (82%)
 Frame = +2

Query: 11  AKDDVMKISFAGLKHLVLEAVAFGSFLWDV*CYVDASYAFV 133
           +KD+++KISF GLK LVLEAV FGSFLWDV  +VD+ Y FV
Sbjct: 320 SKDELIKISFGGLKRLVLEAVTFGSFLWDVESFVDSRYHFV 360


>tr|A5BZG6|A5BZG6_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_005141 PE=4 SV=1
          Length = 89

 Score = 60.5 bits (145), Expect = 4e-08
 Identities = 28/41 (68%), Positives = 34/41 (82%)
 Frame = +2

Query: 11  AKDDVMKISFAGLKHLVLEAVAFGSFLWDV*CYVDASYAFV 133
           +KD+++KISF GLK LVLEAV FGSFLWDV  +VD+ Y FV
Sbjct: 47  SKDELIKISFGGLKRLVLEAVTFGSFLWDVESFVDSRYHFV 87


>tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized
           protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800
           PE=2 SV=1
          Length = 421

 Score = 59.3 bits (142), Expect = 9e-08
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = +2

Query: 11  AKDDVMKISFAGLKHLVLEAVAFGSFLWDV*CYVDASYAFV 133
           +KD+ +KISF G+K LVLEAV FGSFLWDV  +VDA Y FV
Sbjct: 379 SKDEQIKISFGGMKRLVLEAVTFGSFLWDVESHVDARYHFV 419


>tr|Q9AT51|Q9AT51_BRANA Putative uncharacterized protein (Fragment)
           OS=Brassica napus PE=2 SV=1
          Length = 256

 Score = 59.3 bits (142), Expect = 9e-08
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = +2

Query: 11  AKDDVMKISFAGLKHLVLEAVAFGSFLWDV*CYVDASYAFV 133
           +KD+ +KISF G+K LVLEAV FGSFLWDV  +VDA Y FV
Sbjct: 214 SKDEQIKISFGGMKRLVLEAVTFGSFLWDVESHVDARYHFV 254


>tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g17800;
           MEB5.2 (Putative uncharacterized protein At3g17800)
           OS=Arabidopsis thaliana GN=At3g17800/MEB5.2 PE=2 SV=1
          Length = 421

 Score = 59.3 bits (142), Expect = 9e-08
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = +2

Query: 11  AKDDVMKISFAGLKHLVLEAVAFGSFLWDV*CYVDASYAFV 133
           +KD+ +KISF G+K LVLEAV FGSFLWDV  +VDA Y FV
Sbjct: 379 SKDEQIKISFGGMKRLVLEAVTFGSFLWDVESHVDARYHFV 419


>tr|Q56ZA5|Q56ZA5_ARATH Putative uncharacterized protein At3g17800
           OS=Arabidopsis thaliana GN=At3g17800 PE=4 SV=1
          Length = 89

 Score = 59.3 bits (142), Expect = 9e-08
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = +2

Query: 11  AKDDVMKISFAGLKHLVLEAVAFGSFLWDV*CYVDASYAFV 133
           +KD+ +KISF G+K LVLEAV FGSFLWDV  +VDA Y FV
Sbjct: 47  SKDEQIKISFGGMKRLVLEAVTFGSFLWDVESHVDARYHFV 87


>tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g17800
           OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1
          Length = 421

 Score = 59.3 bits (142), Expect = 9e-08
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = +2

Query: 11  AKDDVMKISFAGLKHLVLEAVAFGSFLWDV*CYVDASYAFV 133
           +KD+ +KISF G+K LVLEAV FGSFLWDV  +VDA Y FV
Sbjct: 379 SKDEQIKISFGGMKRLVLEAVTFGSFLWDVESHVDARYHFV 419


>tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein
           At1g48450) (At1g48450/T1N15_5) OS=Arabidopsis thaliana
           GN=At1g48450 PE=2 SV=1
          Length = 423

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = +2

Query: 11  AKDDVMKISFAGLKHLVLEAVAFGSFLWDV*CYVDASYAFV 133
           +KD+ +KISF GLK LVLEAV FGSFLWDV  +VD+ Y FV
Sbjct: 381 SKDEHIKISFKGLKRLVLEAVTFGSFLWDVESHVDSRYHFV 421


>tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 434

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 27/39 (69%), Positives = 32/39 (82%)
 Frame = +2

Query: 17  DDVMKISFAGLKHLVLEAVAFGSFLWDV*CYVDASYAFV 133
           D+++KISF+GL  LVLEAV FGSFLWDV  YVD+ Y FV
Sbjct: 394 DEIIKISFSGLTSLVLEAVTFGSFLWDVESYVDSRYHFV 432