DK944035 |
Clone id |
YMU02A01NGRL0004_M13 |
Library |
YMU02 |
Length |
528 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0004_M13. 5' end sequence. |
Accession |
DK944035 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL1937Contig1 |
Sequence |
GTTCGTCCCAGATGCTGAGCTCCGCGAATCTTTACGCTTGGCTGTGGCGGAAGTGCTTTT GCCAGCATATCGCTCCTTTCTGAAACACTTTGGTTCATTAATGGAGAGTGGCAAGAACCC CCAGAAGTATGTAAGGTTCAGTCCTGAGAAGCTGGATGCTATGCTTGGAGAGCTGTTTGA GGGAAAAACCAGAACAGAGCCACGGCGGTAGTAGTTCGTGCCTGGTGCTGCAAAGTGGTT CTCTATCTTTTATGCCAGTTTTGTGAAATTTCATGGCTGGATCTGCTAAGGGTGTGGAGT GGAGAGGTGTGTATAGTTCTTGGTGTGTGCTTTTTGTAAAGATTTTAGGATTATATGATG AGTCCTGCTCTATGTTTACAAGATTCATTTGCTCAAGTCCGTGCTTGTCAAAAGTGGATG ACCGGCATGAGTTTATAATGTTCATGAAAGAATCTGGGCTTTCCTTGGATGCATCTATGT GAAGTGTATGCATCTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9UPT5 |
Definition |
sp|Q9UPT5|EXOC7_HUMAN Exocyst complex component 7 OS=Homo sapiens |
Align length |
59 |
Score (bit) |
46.2 |
E-value |
8.0e-05 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9FHC6|Q9FHC6_ARATH Emb |
Definition |
tr|Q9FHC6|Q9FHC6_ARATH Emb|CAB83315.1 OS=Arabidopsis thaliana |
Align length |
68 |
Score (bit) |
111.0 |
E-value |
2.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944035|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0004_M13, 5' (497 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9FHC6|Q9FHC6_ARATH Emb|CAB83315.1 OS=Arabidopsis thaliana PE... 111 2e-23 tr|Q9LZD3|Q9LZD3_ARATH Putative uncharacterized protein F12E4_32... 109 8e-23 tr|B3H609|B3H609_ARATH Uncharacterized protein At5g03540.2 OS=Ar... 109 8e-23 tr|A9NWM1|A9NWM1_PICSI Putative uncharacterized protein OS=Picea... 107 2e-22 tr|A7QHV3|A7QHV3_VITVI Chromosome undetermined scaffold_100, who... 105 2e-21 tr|A7PP53|A7PP53_VITVI Chromosome chr8 scaffold_23, whole genome... 102 1e-20 tr|A5AUC0|A5AUC0_VITVI Putative uncharacterized protein OS=Vitis... 102 1e-20 tr|Q2RAC2|Q2RAC2_ORYSJ Exocyst subunit EXO70 family protein, put... 100 4e-20 tr|B8BJ75|B8BJ75_ORYSI Putative uncharacterized protein OS=Oryza... 100 4e-20 tr|B6SVA0|B6SVA0_MAIZE Protein binding protein OS=Zea mays PE=2 ... 100 4e-20 tr|B4FXP8|B4FXP8_MAIZE Putative uncharacterized protein OS=Zea m... 100 4e-20 tr|A3C8U0|A3C8U0_ORYSJ Putative uncharacterized protein OS=Oryza... 100 4e-20 tr|A9S081|A9S081_PHYPA Predicted protein OS=Physcomitrella paten... 98 2e-19 tr|Q9FHC5|Q9FHC5_ARATH Emb|CAB83315.1 OS=Arabidopsis thaliana GN... 91 2e-17 tr|Q2QXF0|Q2QXF0_ORYSJ Os12g0159700 protein OS=Oryza sativa subs... 90 7e-17 tr|A3CF59|A3CF59_ORYSJ Putative uncharacterized protein OS=Oryza... 90 7e-17 tr|A2ZIA7|A2ZIA7_ORYSI Putative uncharacterized protein OS=Oryza... 90 7e-17 tr|Q7XPT8|Q7XPT8_ORYSJ Os04g0685600 protein OS=Oryza sativa subs... 89 1e-16 tr|B8ART3|B8ART3_ORYSI Putative uncharacterized protein OS=Oryza... 89 1e-16 tr|Q7XPT9|Q7XPT9_ORYSJ OSJNBa0088H09.17 protein OS=Oryza sativa ... 79 1e-13 tr|Q259N7|Q259N7_ORYSA H0723C07.2 protein (H0913C04.13 protein) ... 79 1e-13 tr|B8ART2|B8ART2_ORYSI Putative uncharacterized protein OS=Oryza... 79 1e-13 tr|A3AYT9|A3AYT9_ORYSJ Putative uncharacterized protein OS=Oryza... 79 1e-13 tr|A9RYU9|A9RYU9_PHYPA Predicted protein OS=Physcomitrella paten... 78 2e-13 tr|Q259N6|Q259N6_ORYSA H0723C07.3 protein OS=Oryza sativa GN=H07... 77 5e-13 tr|A3AYU0|A3AYU0_ORYSJ Putative uncharacterized protein OS=Oryza... 77 5e-13 tr|A9SA36|A9SA36_PHYPA Predicted protein OS=Physcomitrella paten... 76 1e-12 tr|B6SVR8|B6SVR8_MAIZE Protein binding protein OS=Zea mays PE=2 ... 73 7e-12 tr|Q7XVB9|Q7XVB9_ORYSJ Os04g0382200 protein OS=Oryza sativa subs... 73 9e-12 tr|A3AT49|A3AT49_ORYSJ Putative uncharacterized protein OS=Oryza... 73 9e-12
>tr|Q9FHC6|Q9FHC6_ARATH Emb|CAB83315.1 OS=Arabidopsis thaliana PE=4 SV=1 Length = 608
Score = 111 bits (277), Expect = 2e-23 Identities = 53/68 (77%), Positives = 61/68 (89%) Frame = +2
Query: 5 VPDAELRESLRLAVAEVLLPAYRSFLKHFGSLMESGKNPQKYVRFSPEKLDAMLGELFEG 184 VPD+ELRESLRLAVAEVLLPA+RSFLK FG ++ESGKNPQKY+RFSPE L+ ML E FEG Sbjct: 541 VPDSELRESLRLAVAEVLLPAFRSFLKRFGPMIESGKNPQKYIRFSPEDLERMLNEFFEG 600
Query: 185 KTRTEPRR 208 KT +EP+R Sbjct: 601 KTWSEPKR 608
>tr|Q9LZD3|Q9LZD3_ARATH Putative uncharacterized protein F12E4_320 (Putative uncharacterized protein At5g03540) OS=Arabidopsis thaliana GN=F12E4_320 PE=2 SV=1 Length = 638
Score = 109 bits (272), Expect = 8e-23 Identities = 52/68 (76%), Positives = 60/68 (88%) Frame = +2
Query: 5 VPDAELRESLRLAVAEVLLPAYRSFLKHFGSLMESGKNPQKYVRFSPEKLDAMLGELFEG 184 VPD ELRESLRLAVAEVLLPAYRSFLK FG L+ESGKNPQKY++++ E L+ +LGELFEG Sbjct: 571 VPDTELRESLRLAVAEVLLPAYRSFLKRFGPLVESGKNPQKYIKYTAEDLERLLGELFEG 630
Query: 185 KTRTEPRR 208 K+ EPRR Sbjct: 631 KSMNEPRR 638
>tr|B3H609|B3H609_ARATH Uncharacterized protein At5g03540.2 OS=Arabidopsis thaliana GN=At5g03540 PE=4 SV=1 Length = 523
Score = 109 bits (272), Expect = 8e-23 Identities = 52/68 (76%), Positives = 60/68 (88%) Frame = +2
Query: 5 VPDAELRESLRLAVAEVLLPAYRSFLKHFGSLMESGKNPQKYVRFSPEKLDAMLGELFEG 184 VPD ELRESLRLAVAEVLLPAYRSFLK FG L+ESGKNPQKY++++ E L+ +LGELFEG Sbjct: 456 VPDTELRESLRLAVAEVLLPAYRSFLKRFGPLVESGKNPQKYIKYTAEDLERLLGELFEG 515
Query: 185 KTRTEPRR 208 K+ EPRR Sbjct: 516 KSMNEPRR 523
>tr|A9NWM1|A9NWM1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 647
Score = 107 bits (268), Expect = 2e-22 Identities = 51/68 (75%), Positives = 59/68 (86%) Frame = +2
Query: 5 VPDAELRESLRLAVAEVLLPAYRSFLKHFGSLMESGKNPQKYVRFSPEKLDAMLGELFEG 184 VPD ELRESLRLAVAEVLLPAYR FLK FGSL+++GKNPQKY++++ E LD MLGE FEG Sbjct: 580 VPDNELRESLRLAVAEVLLPAYRQFLKRFGSLLDNGKNPQKYIKYTAEDLDRMLGEFFEG 639
Query: 185 KTRTEPRR 208 K R +PRR Sbjct: 640 KPRGDPRR 647
>tr|A7QHV3|A7QHV3_VITVI Chromosome undetermined scaffold_100, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00013809001 PE=4 SV=1 Length = 650
Score = 105 bits (261), Expect = 2e-21 Identities = 50/68 (73%), Positives = 58/68 (85%) Frame = +2
Query: 5 VPDAELRESLRLAVAEVLLPAYRSFLKHFGSLMESGKNPQKYVRFSPEKLDAMLGELFEG 184 VPD ELRESLRLAVAEVLLPAYR+F+K FG L+ESGKNPQKY+RF+ E L+ MLGE FEG Sbjct: 583 VPDTELRESLRLAVAEVLLPAYRNFIKRFGPLVESGKNPQKYIRFTAEDLERMLGEFFEG 642
Query: 185 KTRTEPRR 208 +T E +R Sbjct: 643 RTLNEAKR 650
>tr|A7PP53|A7PP53_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021515001 PE=4 SV=1 Length = 648
Score = 102 bits (254), Expect = 1e-20 Identities = 48/68 (70%), Positives = 58/68 (85%) Frame = +2
Query: 5 VPDAELRESLRLAVAEVLLPAYRSFLKHFGSLMESGKNPQKYVRFSPEKLDAMLGELFEG 184 VPD+ELRESLRLAVAEVLLPAYRSF+K FG ++E+GKNP KY+R++PE L+ ML E FEG Sbjct: 581 VPDSELRESLRLAVAEVLLPAYRSFIKRFGPMIENGKNPHKYIRYTPEDLEHMLSEFFEG 640
Query: 185 KTRTEPRR 208 KT E +R Sbjct: 641 KTLNELKR 648
>tr|A5AUC0|A5AUC0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039782 PE=4 SV=1 Length = 643
Score = 102 bits (254), Expect = 1e-20 Identities = 48/68 (70%), Positives = 58/68 (85%) Frame = +2
Query: 5 VPDAELRESLRLAVAEVLLPAYRSFLKHFGSLMESGKNPQKYVRFSPEKLDAMLGELFEG 184 VPD+ELRESLRLAVAEVLLPAYRSF+K FG ++E+GKNP KY+R++PE L+ ML E FEG Sbjct: 576 VPDSELRESLRLAVAEVLLPAYRSFIKRFGPMIENGKNPHKYIRYTPEDLEHMLSEFFEG 635
Query: 185 KTRTEPRR 208 KT E +R Sbjct: 636 KTLNELKR 643
>tr|Q2RAC2|Q2RAC2_ORYSJ Exocyst subunit EXO70 family protein, putative, expressed OS=Oryza sativa subsp. japonica GN=Os11g0157400 PE=2 SV=2 Length = 643
Score = 100 bits (249), Expect = 4e-20 Identities = 48/68 (70%), Positives = 58/68 (85%) Frame = +2
Query: 5 VPDAELRESLRLAVAEVLLPAYRSFLKHFGSLMESGKNPQKYVRFSPEKLDAMLGELFEG 184 VPD ELRESLRLAVAEVLLPAYRSF+K FG+L+E+GKNP KYVR+SPE ++ +LGE FEG Sbjct: 576 VPDQELRESLRLAVAEVLLPAYRSFVKRFGNLVENGKNPHKYVRYSPEMVEQLLGEFFEG 635
Query: 185 KTRTEPRR 208 + E +R Sbjct: 636 QQWGEQKR 643
>tr|B8BJ75|B8BJ75_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35189 PE=4 SV=1 Length = 643
Score = 100 bits (249), Expect = 4e-20 Identities = 48/68 (70%), Positives = 58/68 (85%) Frame = +2
Query: 5 VPDAELRESLRLAVAEVLLPAYRSFLKHFGSLMESGKNPQKYVRFSPEKLDAMLGELFEG 184 VPD ELRESLRLAVAEVLLPAYRSF+K FG+L+E+GKNP KYVR+SPE ++ +LGE FEG Sbjct: 576 VPDQELRESLRLAVAEVLLPAYRSFVKRFGNLVENGKNPHKYVRYSPEMVEQLLGEFFEG 635
Query: 185 KTRTEPRR 208 + E +R Sbjct: 636 QQWGEQKR 643
>tr|B6SVA0|B6SVA0_MAIZE Protein binding protein OS=Zea mays PE=2 SV=1 Length = 634
Score = 100 bits (249), Expect = 4e-20 Identities = 47/68 (69%), Positives = 58/68 (85%) Frame = +2
Query: 5 VPDAELRESLRLAVAEVLLPAYRSFLKHFGSLMESGKNPQKYVRFSPEKLDAMLGELFEG 184 VPD ELRESLRLAVAEVLLPAYRSF+K FG+L+++ KNPQKYVR+SPE +D +LG+ FEG Sbjct: 567 VPDQELRESLRLAVAEVLLPAYRSFIKRFGNLVDNNKNPQKYVRYSPEAVDQLLGQFFEG 626
Query: 185 KTRTEPRR 208 + E +R Sbjct: 627 QQWAEQKR 634
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