BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944037|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_M15, 5'
         (255 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q1RLK6|B3GN4_MOUSE UDP-GlcNAc:betaGal beta-1,3-N-acetylglucos...    30   3.7  
sp|Q8R4S7|AHR_MUSCR Aryl hydrocarbon receptor OS=Mus caroli GN=A...    29   6.3  
sp|Q8R4S2|AHR_MUSSP Aryl hydrocarbon receptor OS=Mus spretus GN=...    29   8.3  

>sp|Q1RLK6|B3GN4_MOUSE UDP-GlcNAc:betaGal
           beta-1,3-N-acetylglucosaminyltransferase 4 OS=Mus
           musculus GN=B3gnt4 PE=2 SV=1
          Length = 350

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 9/52 (17%)
 Frame = -3

Query: 196 YMEISSKLQGLSGWDPQKNNLEG-----ASEHRNCAVCN----APYRARHFP 68
           ++ + + L+ L GWDP ++ L G     A  +RN  V      + YRARH+P
Sbjct: 196 FIHVPNVLEFLEGWDPAQDFLVGDVIRLARPNRNTKVKYFIPFSMYRARHYP 247


>sp|Q8R4S7|AHR_MUSCR Aryl hydrocarbon receptor OS=Mus caroli GN=Ahr
           PE=2 SV=1
          Length = 854

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -3

Query: 202 KHYMEISSKLQGLSGWDPQKNNLEGASEHRNCAVCNAPYRARHFPS 65
           KHY  + S LQG +   P K  ++G    +N A CN P    H  S
Sbjct: 678 KHY-HLFSSLQGTAQEFPYKPEVDGMPYTQNFAPCNQPLLPEHSKS 722


>sp|Q8R4S2|AHR_MUSSP Aryl hydrocarbon receptor OS=Mus spretus GN=Ahr
           PE=2 SV=1
          Length = 854

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -3

Query: 202 KHYMEISSKLQGLSGWDPQKNNLEGASEHRNCAVCNAPYRARHFPS 65
           KHY +I S LQG +   P K  ++     +N A CN P    H  S
Sbjct: 678 KHY-QIFSSLQGTAQEFPYKPEVDSVPYTQNFAPCNQPLLPEHSKS 722

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944037|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_M15, 5'
         (255 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******