DK944052
Clone id YMU02A01NGRL0004_N07
Library
Length 472
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0004_N07. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
GCTTTGGATGCGCTTCTTCAACTGCTGCAGGTCATGGTTTACCTTCTGTGTTTTCCAGGC
CGCAAGATGTTTGAGGTGCCATCCTTCTGTCTTCTTCCCGAGGAGCTTGGTATTGCTACA
AATATGGCTGATGCAGATTCTAAGACTTGTAGAAAGGGAGTTTCAGCGGGGACTGAGGTG
TGCAGCAAGCGGGTGCCAGCTATTCCAGCAAATGTTGAATCGAGGGTGGAGAATTAGGGA
AGAAAGAATGTAGATATAGGTTTTTTGAAAGTGGATGACAGATTTCAGGAGGATCTTTTG
GTTTTGGGAGAGACAACCGCATTTGGTTTTGGGGGAGACAGCCACAAAGCAAAAAGATAA
GTGGGCAAGAAAGAAGTTTGACTTCTGGAGGAAGGTGTCTGGTGTGGATTGTGATACTTT
ACTGGAGAAGATTGAGTTGTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P60330
Definition sp|P60330|ESPL1_MOUSE Separin OS=Mus musculus
Align length 75
Score (bit) 33.1
E-value 0.53
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944052|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_N07, 5'
(442 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P60330|ESPL1_MOUSE Separin OS=Mus musculus GN=Espl1 PE=2 SV=1 33 0.53
sp|P08640|MUC1_YEAST Mucin-like protein 1 OS=Saccharomyces cerev... 31 2.0
sp|Q15911|ZFHX3_HUMAN Zinc finger homeobox protein 3 OS=Homo sap... 31 2.6
sp|P36956|SRBP1_HUMAN Sterol regulatory element-binding protein ... 31 2.6
sp|P36304|POLR_KYMVJ RNA replicase polyprotein OS=Kennedya yello... 30 4.5
sp|Q8NDZ2|CE025_HUMAN Uncharacterized protein C5orf25 OS=Homo sa... 30 4.5
sp|P28477|POLR_TYMVC RNA replicase polyprotein OS=Turnip yellow ... 30 5.7
sp|P10358|POLR_TYMV RNA replicase polyprotein OS=Turnip yellow m... 30 5.7
sp|Q68FP2|PON3_RAT Serum paraoxonase/lactonase 3 OS=Rattus norve... 30 5.9
sp|Q9H2Y7|ZF106_HUMAN Zinc finger protein 106 homolog OS=Homo sa... 29 7.5
sp|P20128|POLR_TYMVA RNA replicase polyprotein OS=Turnip yellow ... 29 7.5
sp|O28832|GATE_ARCFU Glutamyl-tRNA(Gln) amidotransferase subunit... 29 7.5
sp|A2AWL7|MGAP_MOUSE MAX gene-associated protein OS=Mus musculus... 29 9.8
sp|Q9D9T6|SPTA3_MOUSE Spermatogenesis-associated protein 3 OS=Mu... 29 10.0

>sp|P60330|ESPL1_MOUSE Separin OS=Mus musculus GN=Espl1 PE=2 SV=1
Length = 2118

Score = 33.1 bits (74), Expect = 0.53
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +2

Query: 2 LWMRFFNCCRSWFTFCVFQAARCLRCHPSVFFPRSLVLLQIWLMQILRLVEREFQRGLRC 181
LW R+ C+ Q A L+ +V+ + L + + +L++V + Q +
Sbjct: 748 LWKEVLTKGRAPAVRCLQQTAASLQILAAVYQLVAKPLQALETLLLLQIVSKRLQDHAKA 807

Query: 182 AASGCQLFQQMLNRG 226
A+S CQL Q +LN G
Sbjct: 808 ASSSCQLTQLLLNLG 822


>sp|P08640|MUC1_YEAST Mucin-like protein 1 OS=Saccharomyces
cerevisiae GN=MUC1 PE=1 SV=2
Length = 1367

Score = 31.2 bits (69), Expect = 2.0
Identities = 35/114 (30%), Positives = 46/114 (40%)
Frame = -3

Query: 440 TTQSSPVKYHNPHQTPSSRSQTSFLPTYLFALWLSPPKPNAVVSPKTKRSS*NLSSTFKK 261
TT+SS P TPSS + S S P P S S+ SST +
Sbjct: 504 TTESSSA----PVPTPSSSTTESS----------SAPAPTPSSSTTESSSAPVTSSTTES 549

Query: 260 PISTFFLP*FSTLDSTFAGIAGTRLLHTSVPAETPFLQVLESASAIFVAIPSSS 99
+ P ST +S+ + + +S P TP ES+SA V PSSS
Sbjct: 550 SSAPVPTPSSSTTESSSTPVTSSTTESSSAPVPTPSSSTTESSSAP-VPTPSSS 602


>sp|Q15911|ZFHX3_HUMAN Zinc finger homeobox protein 3 OS=Homo sapiens
GN=ZFHX3 PE=1 SV=2
Length = 3703

Score = 30.8 bits (68), Expect = 2.6
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = -3

Query: 293 SS*NLSSTFKKPISTFFLP*FSTLDSTFAGIAGTRLLHTSVPAETPFLQVLESASAIFVA 114
SS +LSS+ P+ST F+T + + AGIA + L + VP E+ + L + +A
Sbjct: 1643 SSISLSSSTPSPVSTSGSNTFTTSNPSSAGIAPSSNLLSQVPTESVGMPPLGNPIGANIA 1702

Query: 113 IPS 105
PS
Sbjct: 1703 SPS 1705


>sp|P36956|SRBP1_HUMAN Sterol regulatory element-binding protein 1
OS=Homo sapiens GN=SREBF1 PE=1 SV=2
Length = 1147

Score = 30.8 bits (68), Expect = 2.6
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -1

Query: 412 TIHTRHLPPEVKLLSCPLIFLLCGCLPQNQM--RLSLPKPKDPPEICHPLSKNL 257
++H+R + +L C L+FL C P + LP P D + H +N+
Sbjct: 476 SLHSRGMLDRSRLALCTLVFLCLSCNPLASLLGARGLPSPSDTTSVYHSPGRNV 529


>sp|P36304|POLR_KYMVJ RNA replicase polyprotein OS=Kennedya yellow
mosaic virus (strain Jervis bay) PE=3 SV=1
Length = 1874

Score = 30.0 bits (66), Expect = 4.5
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 12/72 (16%)
Frame = -1

Query: 334 PQNQMRLSLPKPKDPPEICHPLS------------KNLYLHSFFPNSPPSIQHLLE*LAP 191
P N LP+PK P E+ PL +LY FFPN+ + L
Sbjct: 742 PTNTTLSLLPEPKPPTEVQSPLMADPTCVGPAVSFSSLYPRDFFPNTASFLTRLR----- 796

Query: 190 ACCTPQSPLKLP 155
+P +PL +P
Sbjct: 797 --LSPPTPLPMP 806


>sp|Q8NDZ2|CE025_HUMAN Uncharacterized protein C5orf25 OS=Homo
sapiens GN=C5orf25 PE=1 SV=1
Length = 872

Score = 30.0 bits (66), Expect = 4.5
Identities = 22/70 (31%), Positives = 29/70 (41%)
Frame = -1

Query: 334 PQNQMRLSLPKPKDPPEICHPLSKNLYLHSFFPNSPPSIQHLLE*LAPACCTPQSPLKLP 155
PQ+ + L P P I HP YL P SP + ++P+ PQSP +P
Sbjct: 260 PQDSLGLPQDVPGLPQSILHPQDV-AYLQDM-PRSPGDVPQSPSDVSPSPDAPQSPGGMP 317

Query: 154 FYKS*NLHQP 125
LH P
Sbjct: 318 HLPGDVLHSP 327


>sp|P28477|POLR_TYMVC RNA replicase polyprotein OS=Turnip yellow
mosaic virus (isolate TYMC) PE=3 SV=1
Length = 1844

Score = 29.6 bits (65), Expect = 5.7
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Frame = -3

Query: 407 PHQTPSSRSQTSFLPTYLFALW------LSPPKPNAVVSPKTKRSS*NLSSTFKKPISTF 246
P Q P +R T FLP L ++PP + V P ++S F ++ F
Sbjct: 1294 PDQGPETRLDTHFLPPSRLPLHFDLPPAITPPPVSTSVDPPQAKASPVYPGEFFDSLAAF 1353

Query: 245 FLP 237
FLP
Sbjct: 1354 FLP 1356


>sp|P10358|POLR_TYMV RNA replicase polyprotein OS=Turnip yellow mosaic
virus PE=3 SV=2
Length = 1844

Score = 29.6 bits (65), Expect = 5.7
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Frame = -3

Query: 407 PHQTPSSRSQTSFLPTYLFALW------LSPPKPNAVVSPKTKRSS*NLSSTFKKPISTF 246
P Q P +R T FLP L ++PP + V P ++S F ++ F
Sbjct: 1294 PDQGPETRLDTHFLPPSRLPLHFDLPPAITPPPVSTSVDPPQAKASPVYPGEFFDSLAAF 1353

Query: 245 FLP 237
FLP
Sbjct: 1354 FLP 1356


>sp|Q68FP2|PON3_RAT Serum paraoxonase/lactonase 3 OS=Rattus
norvegicus GN=Pon3 PE=2 SV=1
Length = 354

Score = 29.6 bits (65), Expect = 5.9
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = -1

Query: 352 LLCGCLPQNQMRLSLPKPKDPP-----EICHPLSKNLYLHSFFPNSPPSIQ 215
+L GC P N M+L + P+DPP I PLS N + + + N+ +Q
Sbjct: 279 ILAGCHP-NPMKLLIYNPEDPPGSEVLRIQDPLSDNPRVSTLYSNNGSVLQ 328


>sp|Q9H2Y7|ZF106_HUMAN Zinc finger protein 106 homolog OS=Homo sapiens
GN=ZFP106 PE=1 SV=1
Length = 1883

Score = 29.3 bits (64), Expect = 7.5
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = -3

Query: 392 SSRSQTSF----LPTYLFALWLSPPKPNAVVSPKTKRSS*NLSSTFK 264
+SRSQTS LPT F L+L PP + SP S TF+
Sbjct: 1139 NSRSQTSIDAALLPTPFFPLFLEPPSSHVSPSPTGASLQITTSPTFQ 1185


tr_hit_id B6NFZ7
Definition tr|B6NFZ7|B6NFZ7_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae
Align length 80
Score (bit) 36.6
E-value 0.63
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944052|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_N07, 5'
(442 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6NFZ7|B6NFZ7_BRAFL Putative uncharacterized protein OS=Branc... 37 0.63
tr|B6KNN2|B6KNN2_TOXGO Putative uncharacterized protein OS=Toxop... 37 0.64
tr|Q693M7|Q693M7_EPIBA Even-skipped (Fragment) OS=Episyrphus bal... 34 3.1
tr|Q0FEI6|Q0FEI6_9RHOB Putative cyclopropane/cyclopropene fatty ... 34 4.1
tr|Q2R3G9|Q2R3G9_ORYSJ Retrotransposon protein, putative, Ty1-co... 34 4.1
tr|B0WC54|B0WC54_CULQU Putative uncharacterized protein OS=Culex... 34 4.1
tr|Q4P541|Q4P541_USTMA Predicted protein OS=Ustilago maydis GN=U... 33 5.4
tr|Q299E8|Q299E8_DROPS GA19017 OS=Drosophila pseudoobscura pseud... 33 5.4
tr|Q0GJI4|Q0GJI4_HAPBU Estrogen receptor beta b (Fragment) OS=Ha... 32 5.5
tr|Q56TS3|Q56TS3_MOUSE Protein related to CUT1 and ESP1 OS=Mus m... 33 7.0
tr|Q0VGV2|Q0VGV2_MOUSE Extra spindle poles-like 1 (S. cerevisiae... 33 7.0
tr|A6H6E3|A6H6E3_MOUSE Extra spindle poles-like 1 (S. cerevisiae... 33 7.0
tr|A6H6E1|A6H6E1_MOUSE Espl1 protein OS=Mus musculus GN=Espl1 PE... 33 7.0
tr|Q52VI0|Q52VI0_CIOIN META2 (Fragment) OS=Ciona intestinalis GN... 33 7.0
tr|Q4JTS5|Q4JTS5_CORJK Putative uncharacterized protein OS=Coryn... 33 9.2
tr|A4Q377|A4Q377_MEDTR WD40-like OS=Medicago truncatula GN=MtrDR... 33 9.2
tr|Q1DJP5|Q1DJP5_COCIM Putative uncharacterized protein OS=Cocci... 33 9.2
tr|Q54JT9|Q54JT9_DICDI Putative uncharacterized protein OS=Dicty... 33 9.2

>tr|B6NFZ7|B6NFZ7_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_94673 PE=4 SV=1
Length = 169

Score = 36.6 bits (83), Expect = 0.63
Identities = 30/80 (37%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = -1

Query: 397 HLPPEVKLLSCPLIFLLCGCLPQNQMRLSLPKPKDPPEICHPLSKNLYLHSFFPNSPPSI 218
++PP V +LS PL LC LSL P P +C PLSK L L S P+ P +
Sbjct: 89 NVPPPVPVLSSPLSKPLC---------LSLCSPPSKP-LCSPLSKPLCLLSLCPSKPMCL 138

Query: 217 QHLLE*LAPACCT--PQSPL 164
L P C + P PL
Sbjct: 139 LSLCS-SRPLCLSRPPSKPL 157


>tr|B6KNN2|B6KNN2_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_054000 PE=4 SV=1
Length = 476

Score = 36.6 bits (83), Expect = 0.64
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -3

Query: 407 PHQTPSSRSQTSFLPTYLFALWLSPPKPNAV 315
P +P SRS TSFLP FA ++PP PN +
Sbjct: 69 PSLSPPSRSPTSFLPNASFAACMAPPPPNQI 99


>tr|Q693M7|Q693M7_EPIBA Even-skipped (Fragment) OS=Episyrphus
balteatus PE=2 SV=1
Length = 228

Score = 34.3 bits (77), Expect = 3.1
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = -1

Query: 394 LPPEVKLLSCPLIFLLCGCLPQNQMRLSLPKPKDPPEICHPLSKNLYLHSFFPNSPPSIQ 215
+PP + L+ P + G +PQ +L++PKP PP H + + HS SP
Sbjct: 93 MPPTAQPLAYPTML---GAIPQGYTQLTIPKPHTPP---HDMQSSSSPHSTLSLSPAGSD 146

Query: 214 H 212
H
Sbjct: 147 H 147


>tr|Q0FEI6|Q0FEI6_9RHOB Putative cyclopropane/cyclopropene fatty
acid synthesis protein, flavin amine oxidase
OS=Rhodobacterales bacterium HTCC2255 GN=OM2255_08391
PE=4 SV=1
Length = 427

Score = 33.9 bits (76), Expect = 4.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -2

Query: 303 NQKILLKSVIHFQKTYIYILSSLILHPRFNICWNSW 196
++++ L S I +QK Y+ S I+ P+ CW+SW
Sbjct: 284 DEEVKLLSAIKYQKNQAYLHSDTIVMPKRKRCWSSW 319


>tr|Q2R3G9|Q2R3G9_ORYSJ Retrotransposon protein, putative, Ty1-copia
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os11g31970 PE=4 SV=1
Length = 1212

Score = 33.9 bits (76), Expect = 4.1
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 8/115 (6%)
Frame = -2

Query: 321 CGCLSQNQKILLKSVIHFQKTYIYILSSLILHPRFNI--------CWNSWHPLAAHLSPR 166
CG + + + H + LSS+ L P+F+I C S P H +
Sbjct: 410 CGSVDDEANVWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAE 469

Query: 165 *NSLSTSLRICISHICSNTKLLGKKTEGWHLKHLAAWKTQKVNHDLQQLKKRIQS 1
+L+ L + S +C +L KKT+ L + +K + V + L + KR++S
Sbjct: 470 ERNLA-PLELLHSDLCEMNGVLTKKTKDEALDYFKIYKAE-VENQLDRKIKRLRS 522


>tr|B0WC54|B0WC54_CULQU Putative uncharacterized protein OS=Culex
quinquefasciatus GN=CpipJ_CPIJ004524 PE=4 SV=1
Length = 389

Score = 33.9 bits (76), Expect = 4.1
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
Frame = -1

Query: 394 LPPEVKLLSCPLIFLLCGCLPQNQMRLSLPKPKDPPEI----CHPLSKNLYLHSFFPNSP 227
LPP + P G +P ++LP P +PP CHP +H FP P
Sbjct: 28 LPPHHPMHGSPFENGTFGFVPPPPASIALPCPVEPPICPPIPCHPPGPMGPMHRHFPRYP 87

Query: 226 PSIQHLLE*LAPACCTPQSP 167
P+ L+ + P P P
Sbjct: 88 PATLAPLQAMIPGPGPPGPP 107


>tr|Q4P541|Q4P541_USTMA Predicted protein OS=Ustilago maydis
GN=UM04772.1 PE=4 SV=1
Length = 166

Score = 33.5 bits (75), Expect = 5.4
Identities = 25/64 (39%), Positives = 31/64 (48%)
Frame = +2

Query: 29 RSWFTFCVFQAARCLRCHPSVFFPRSLVLLQIWLMQILRLVEREFQRGLRCAASGCQLFQ 208
R W + ARC+ H SV V L + L ++ RL GLRCAASG L Q
Sbjct: 90 RRWLKSRTWIGARCILIHGSVT-RHGPVCLSVGLGRVDRL-------GLRCAASGNSLVQ 141

Query: 209 QMLN 220
Q L+
Sbjct: 142 QALS 145


>tr|Q299E8|Q299E8_DROPS GA19017 OS=Drosophila pseudoobscura
pseudoobscura GN=GA19017 PE=4 SV=2
Length = 484

Score = 33.5 bits (75), Expect = 5.4
Identities = 39/134 (29%), Positives = 55/134 (41%), Gaps = 11/134 (8%)
Frame = -3

Query: 434 QSSPVKYHNPH--QTPSSRSQTSFLPTYLFALWLSPPKPNAVVSPKTKRSS*NLSSTFKK 261
+ S KYH+ QT + S +S+ T A++ PP P + + S L + KK
Sbjct: 159 RKSHKKYHSRQRRQTYTPCSHSSYYQTPSHAVYFQPPAPPSPYYYLPAKPSQRLPVSGKK 218

Query: 260 PISTFFLP*F------STLDSTFAGIAGTRLLHTSVPAETPFL---QVLESASAIFVAIP 108
PI LP + + + G LLH S PAE F Q + + I +
Sbjct: 219 PILPGKLPIWQDKTDENPTNPMSIGSRDDFLLHNSDPAEADFSIFNQPRPNPNEISGSSG 278

Query: 107 SSSGRRQKDGTSNI 66
SSSG G NI
Sbjct: 279 SSSGSGSDRGRDNI 292


>tr|Q0GJI4|Q0GJI4_HAPBU Estrogen receptor beta b (Fragment)
OS=Haplochromis burtoni PE=2 SV=1
Length = 607

Score = 31.6 bits (70), Expect(2) = 5.5
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = -2

Query: 240 SLILHPRFNICWNSWHPLAAHLSPR*NSLSTSLRICISHICSNTKLLGKKTEG 82
SL LH + +N P A L P+ + +S S S I S KLLGKK+EG
Sbjct: 54 SLTLHCTQPLVYNEPSPHAPWLDPKVHGISPS-----SSIISCNKLLGKKSEG 101



Score = 20.8 bits (42), Expect(2) = 5.5
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = -1

Query: 307 PKPKDPPEICHPLSKNLYLHSFFPNSPPSI 218
P P +C PLS + + S ++ PS+
Sbjct: 26 PITDSPSSLCPPLSPSAFWPSHTHHNVPSL 55


>tr|Q56TS3|Q56TS3_MOUSE Protein related to CUT1 and ESP1 OS=Mus
musculus GN=Espl1 PE=2 SV=1
Length = 2118

Score = 33.1 bits (74), Expect = 7.0
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +2

Query: 2 LWMRFFNCCRSWFTFCVFQAARCLRCHPSVFFPRSLVLLQIWLMQILRLVEREFQRGLRC 181
LW R+ C+ Q A L+ +V+ + L + + +L++V + Q +
Sbjct: 748 LWKEVLTKGRAPAVRCLQQTAASLQILAAVYQLVAKPLQALETLLLLQIVSKRLQDHAKA 807

Query: 182 AASGCQLFQQMLNRG 226
A+S CQL Q +LN G
Sbjct: 808 ASSSCQLTQLLLNLG 822