DK944069
Clone id YMU02A01NGRL0004_O05
Library
Length 429
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0004_O05. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
TTCAGAATTGTACCTGCCATTACAGATCCTCCTCATTGTGGCTGTCTTAAGATTTTAGAC
AGCTATCGTTTCCAGGTTGAACACATTATTTTTATAAACACATTAGTTTGTAAGAAACCT
CTGCCGATCCTCTCCCTTGTAACACAAATCTTACGGTTGTCTAATTGGCATATGATTGTG
TAACAACAGAGTGGTACTAATCACATTGTATTTGATAGGTGATTATATTTCTTTTGTGTC
GCATATGAAATCTGTGTGAGCCTATATAGAAGGCCGAAAGATGTTTTGTAAGAAAAGTAC
AACTACTTGGAAATCCACTTGGAATAATGATATTGAGCCGAANAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9JRX2
Definition sp|Q9JRX2|Y129_CHLPN Uncharacterized protein CPn_0129/CPn_0130/CP_0642/CPj0130/CpB0131 OS=Chlamydia pneumoniae
Align length 45
Score (bit) 30.4
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944069|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_O05, 5'
(340 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9JRX2|Y129_CHLPN Uncharacterized protein CPn_0129/CPn_0130/C... 30 2.9

>sp|Q9JRX2|Y129_CHLPN Uncharacterized protein
CPn_0129/CPn_0130/CP_0642/CPj0130/CpB0131 OS=Chlamydia
pneumoniae GN=CPn_0129/CPn_0130 PE=3 SV=1
Length = 394

Score = 30.4 bits (67), Expect = 2.9
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -3

Query: 281 SFGLLYRLTQISYATQKKYNHLSNTM*LVPLCCYTIICQLDNRKI 147
SFGLL+ ++SYA+ N L++++ L Y +I + D KI
Sbjct: 341 SFGLLHGYEEMSYASNNIRNVLTHSIVLCSPILYQLITEFDTTKI 385


tr_hit_id Q8XQ59
Definition tr|Q8XQ59|Q8XQ59_RALSO Probable signal peptide protein OS=Ralstonia solanacearum
Align length 45
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944069|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_O05, 5'
(340 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8XQ59|Q8XQ59_RALSO Probable signal peptide protein OS=Ralsto... 35 2.4
tr|B2E557|B2E557_STRPN Putative uncharacterized protein OS=Strep... 34 4.2
tr|A8B2W2|A8B2W2_GIALA Putative uncharacterized protein OS=Giard... 33 5.5
tr|B5E502|B5E502_STRP4 Putative uncharacterized protein OS=Strep... 33 9.3
tr|B2DY37|B2DY37_STRPN Putative uncharacterized protein OS=Strep... 33 9.3
tr|A5MGN8|A5MGN8_STRPN Putative uncharacterized protein OS=Strep... 33 9.3

>tr|Q8XQ59|Q8XQ59_RALSO Probable signal peptide protein OS=Ralstonia
solanacearum GN=RSp1427 PE=4 SV=1
Length = 317

Score = 34.7 bits (78), Expect = 2.4
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +1

Query: 37 CGCLKILDSYRFQVEHIIFINTLVCKKPLPILSLVTQILRLSNWH 171
CG + I+ S R Q +H + N L+C + LP+L L T L WH
Sbjct: 171 CGGVYIVASSRAQRKHALTANDLICIR-LPLLLLATAALSAPEWH 214


>tr|B2E557|B2E557_STRPN Putative uncharacterized protein
OS=Streptococcus pneumoniae MLV-016 GN=SPMLV016_1171
PE=4 SV=1
Length = 80

Score = 33.9 bits (76), Expect = 4.2
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = -3

Query: 326 YSKWISK*LYFSYKTSFGLLYRLTQISYATQKKYNHLSNTM 204
+SKWIS+ FS+ F L++L Q+ AT K+Y LS+++
Sbjct: 6 FSKWISRVEDFSHIILFENLFKLRQLPSATSKQYFELSSSV 46


>tr|A8B2W2|A8B2W2_GIALA Putative uncharacterized protein OS=Giardia
lamblia ATCC 50803 GN=GL50803_22268 PE=4 SV=1
Length = 1285

Score = 33.5 bits (75), Expect = 5.5
Identities = 21/94 (22%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Frame = +1

Query: 43 CLKILDSYRFQVEHIIFINTLVCKKPLPILSLVTQILRLSNWHMIV*QQS----GTNHIV 210
C+ L F++ I+ + ++C+KP+ L + L+NW++ + Q++ T I+
Sbjct: 202 CITRLRYLTFKISSILNLARVICRKPVSYPDLTLSVTDLANWNLYLKQEAFYTRNTTAII 261

Query: 211 FDR*LYFFCVAYEICVSLYRRPKDVL*EKYNYLE 312
F +F ++ ++ + D NYLE
Sbjct: 262 FTVLKFFGQRTFQEVQNIVNKYFDRCTRGRNYLE 295


>tr|B5E502|B5E502_STRP4 Putative uncharacterized protein
OS=Streptococcus pneumoniae serotype 19F (strain G54)
GN=SPG_1159 PE=4 SV=1
Length = 80

Score = 32.7 bits (73), Expect = 9.3
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = -3

Query: 326 YSKWISK*LYFSYKTSFGLLYRLTQISYATQKKYNHLSNTM 204
+SKWIS+ FS+ F L++L Q+ AT K+Y L++++
Sbjct: 6 FSKWISRVEDFSHIILFENLFKLRQLPSATSKQYFELTSSV 46


>tr|B2DY37|B2DY37_STRPN Putative uncharacterized protein
OS=Streptococcus pneumoniae CDC3059-06 GN=SP305906_1225
PE=4 SV=1
Length = 80

Score = 32.7 bits (73), Expect = 9.3
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = -3

Query: 326 YSKWISK*LYFSYKTSFGLLYRLTQISYATQKKYNHLSNTM 204
+SKWIS+ FS+ F L++L Q+ AT K+Y L++++
Sbjct: 6 FSKWISRVEDFSHIILFENLFKLRQLPSATSKQYFELTSSV 46


>tr|A5MGN8|A5MGN8_STRPN Putative uncharacterized protein
OS=Streptococcus pneumoniae SP18-BS74
GN=CGSSp18BS74_10180 PE=4 SV=1
Length = 125

Score = 32.7 bits (73), Expect = 9.3
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = -3

Query: 326 YSKWISK*LYFSYKTSFGLLYRLTQISYATQKKYNHLSNTM 204
+SKWIS+ FS+ F L++L Q+ AT K+Y L++++
Sbjct: 6 FSKWISRVEDFSHIILFENLFKLRQLPSATSKQYFELTSSV 46