DK944125
Clone id YMU02A01NGRL0005_A20
Library
Length 437
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_A20. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GGAAGCAGTGGTATCAACGCAGAGTGGCCATTACAGCCGGAAAGCAGTGGTATCAACGCA
GAGTGGCCATTACGGCCGGGAAGCAGTGGTATCAACGCAGAGTGGCCATTACAGCCGGGG
GTTCAAAAGCATGGACGATGTGCTTACTTGCTATCAATCAGCCTTGGTTTAGTTGATCTG
GCTGAGCTCAATTTTGGGGGGTTTAAGTTAGAGACATTTGTTCTGAGGGAATACTGAATT
TGCAAGTTTTGCAACTCTTCCAAGTTTTTGTCGAGGAGTATTGGGAGGCAATCTTTATGC
GCAACTAAATGAATTTTTATTGGGAGCTCAAGATAGGATGTTTGGTTTTGTCAAGGAATA
TTGGGAACCAATCTTTATGCGCAACTATTGAATTTGTATTGGGTTCTCGAAAAAAAAAAA
AAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id O36041
Definition sp|O36041|IF2G_SPIVO Eukaryotic translation initiation factor 2 subunit gamma (Fragment) OS=Spironucleus vortens
Align length 53
Score (bit) 30.0
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944125|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_A20, 5'
(290 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O36041|IF2G_SPIVO Eukaryotic translation initiation factor 2 ... 30 3.7
sp|Q03833|GIS1_YEAST Transcriptional activator/repressor GIS1 OS... 30 4.8
sp|A2AQW0|M3K15_MOUSE Mitogen-activated protein kinase kinase ki... 29 6.3
sp|Q8KBW7|Y1665_CHLTE UPF0082 protein CT1665 OS=Chlorobium tepid... 29 8.2

>sp|O36041|IF2G_SPIVO Eukaryotic translation initiation factor 2
subunit gamma (Fragment) OS=Spironucleus vortens PE=3
SV=1
Length = 210

Score = 30.0 bits (66), Expect = 3.7
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = -3

Query: 231 QNQTSYLELPIKIHLVAHKDCLPILLDKNLEELQNLQIQYSLRTNVSNLNPPK 73
Q Q +Y E+ +H ++ + +PI +QNL I Y L+ V + PP+
Sbjct: 150 QAQNNYQEIQAFVHGISDINVVPI------SAIQNLNIDYILKHLVETITPPR 196


>sp|Q03833|GIS1_YEAST Transcriptional activator/repressor GIS1
OS=Saccharomyces cerevisiae GN=GIS1 PE=1 SV=1
Length = 894

Score = 29.6 bits (65), Expect = 4.8
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = -3

Query: 159 LLDKNLEELQNLQIQYSLRTNVSNLNPPKLSSARSTKP 46
LL+ + +ELQNL+ + + N+N P+ SS RST P
Sbjct: 369 LLNHSSQELQNLEDNKNPLFSNINMNRPQSSSLRSTTP 406


>sp|A2AQW0|M3K15_MOUSE Mitogen-activated protein kinase kinase kinase
15 OS=Mus musculus GN=Map3k15 PE=3 SV=1
Length = 1331

Score = 29.3 bits (64), Expect = 6.3
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -3

Query: 180 HKDCLPILLDKNLEELQNLQIQYSLRTNVSNLNPP 76
+++ L ++LD+ +EL +LQ+QY N PP
Sbjct: 1223 YQNLLRLILDQKTQELYHLQLQYKSNGGTENPPPP 1257


>sp|Q8KBW7|Y1665_CHLTE UPF0082 protein CT1665 OS=Chlorobium tepidum
GN=CT1665 PE=3 SV=1
Length = 251

Score = 28.9 bits (63), Expect = 8.2
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -3

Query: 186 VAHKDCLPILLDKNLEELQNLQIQY-SLRTNVSNLNPPK 73
++ D + +LLD LEEL++ QY ++ T+V +L P K
Sbjct: 147 ISEDDLMELLLDAGLEELESDDEQYFTVLTDVKDLEPVK 185


tr_hit_id Q8LGS4
Definition tr|Q8LGS4|Q8LGS4_MALDO S29-RNase (Fragment) OS=Malus domestica
Align length 71
Score (bit) 32.7
E-value 9.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944125|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_A20, 5'
(290 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8LGS4|Q8LGS4_MALDO S29-RNase (Fragment) OS=Malus domestica G... 33 9.3
tr|B5KWA3|B5KWA3_PYRCO Self-incompatibility associated ribonucle... 33 9.3
tr|B2XWE7|B2XWE7_9ROSA S2 RNase (Fragment) OS=Pyrus syriaca PE=4... 33 9.3

>tr|Q8LGS4|Q8LGS4_MALDO S29-RNase (Fragment) OS=Malus domestica GN=S
PE=3 SV=1
Length = 193

Score = 32.7 bits (73), Expect = 9.3
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = -3

Query: 279 YKFNSCA*RLVPNIP*QNQTSYLELPIKIHLVAHKDCLPILLDKNL----EELQNLQIQY 112
YK SCA + P QNQT Y E IK++ ++ IL N+ E+ + I+
Sbjct: 112 YKHGSCA-----SPPLQNQTHYFETVIKMYRTQKQNVSYILSKANIEPKGEKRTRVDIEN 166

Query: 111 SLRTNVSNLNP 79
++R+ +N+ P
Sbjct: 167 AIRSGTNNMVP 177


>tr|B5KWA3|B5KWA3_PYRCO Self-incompatibility associated ribonuclease
(Fragment) OS=Pyrus communis GN=S-RNase PE=4 SV=1
Length = 148

Score = 32.7 bits (73), Expect = 9.3
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = -3

Query: 279 YKFNSCA*RLVPNIP*QNQTSYLELPIKIHLVAHKDCLPILLDKNL----EELQNLQIQY 112
YK SCA + P QNQT Y E IK++ ++ IL N+ E+ + I+
Sbjct: 73 YKHGSCA-----SPPLQNQTHYFETVIKMYRTQKQNVSYILSKANIEPKGEKRTRVDIEN 127

Query: 111 SLRTNVSNLNP 79
++R+ +N+ P
Sbjct: 128 AIRSGTNNMVP 138


>tr|B2XWE7|B2XWE7_9ROSA S2 RNase (Fragment) OS=Pyrus syriaca PE=4
SV=1
Length = 179

Score = 32.7 bits (73), Expect = 9.3
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = -3

Query: 279 YKFNSCA*RLVPNIP*QNQTSYLELPIKIHLVAHKDCLPILLDKNL----EELQNLQIQY 112
YK SCA + P QNQT Y E IK++ ++ IL N+ E+ + I+
Sbjct: 82 YKHGSCA-----SPPLQNQTHYFETVIKMYRTQKQNVSYILSKANIEPKGEKRTRVDIEN 136

Query: 111 SLRTNVSNLNP 79
++R+ +N+ P
Sbjct: 137 AIRSGTNNMVP 147