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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK944127
Clone id YMU02A01NGRL0005_A24
Library
Length 479
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_A24. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GCTTTGTCAAGTGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCCGAAAAGGCTGGACC
CCTTGCATTGAGTTCGACAAAATCGGGAGCGTGTACCGAGAGCACTTCCACGGCAGCGGC
TACTACGATGGGCGGTACTGGGTGATGTGGAAGCTGCCCATGTTTGGCTGCCAAGATGCC
GCTGCTGTGCTGCGTGGAATTGCAGAGTGCGCCAAGGAGTATCCTGAAGCCTTCATCCGC
GTGCTGGGCTTTGACGCTAAGAGGCAGGTGCAGGTCTCCGGCTTCCTTGTCCAGAAGCCC
TCTGTCTAAACTTTCTTAAAGCAAGCCAATTTAGTTGGCATGAATGCCTGCTTCCCATTT
CCCACTGGCGCCTAACAAGCTTGCTCTTATGAGCTTTTGTGTCCCAGCCACTTTGCATAC
ATAATGAAACAACTTCCCAGTGGTGGCGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 100
Score (bit) 140.0
E-value 2.0e-33
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944127|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_A24, 5'
         (449 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   140   2e-33
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   138   9e-33
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   137   2e-32
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   136   5e-32
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   135   6e-32
sp|P08474|RBS_CUCSA Ribulose bisphosphate carboxylase small chai...   135   6e-32
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   135   6e-32
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   135   6e-32
sp|O22573|RBS3_FRIAG Ribulose bisphosphate carboxylase small cha...   135   8e-32
sp|O22572|RBS2_FRIAG Ribulose bisphosphate carboxylase small cha...   135   8e-32
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   135   1e-31
sp|P07398|RBS3_WHEAT Ribulose bisphosphate carboxylase small cha...   135   1e-31
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   135   1e-31
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   134   1e-31
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   134   1e-31
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   134   1e-31
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   134   1e-31
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   134   1e-31
sp|O24634|RBS1_FRIAG Ribulose bisphosphate carboxylase small cha...   134   2e-31
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   134   2e-31
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   133   4e-31
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   133   4e-31
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   132   5e-31
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   132   5e-31
sp|O22645|RBS5_FRIAG Ribulose bisphosphate carboxylase small cha...   132   5e-31
sp|P18566|RBS2_ORYSJ Ribulose bisphosphate carboxylase small cha...   132   5e-31
sp|Q0INY7|RBS1_ORYSJ Ribulose bisphosphate carboxylase small cha...   132   5e-31
sp|A2Y205|RBS1_ORYSI Ribulose bisphosphate carboxylase small cha...   132   5e-31
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   132   9e-31
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   131   1e-30

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  140 bits (353), Expect = 2e-33
 Identities = 60/100 (60%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
 Frame = +1

Query: 4   LSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDA 180
           LS E ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D+
Sbjct: 78  LSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDS 137

Query: 181 AAVLRGIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 300
           A V++ + EC KEYP AFIRV+GFD  RQVQ   F+V KP
Sbjct: 138 AQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  138 bits (348), Expect = 9e-33
 Identities = 61/100 (61%), Positives = 77/100 (77%), Gaps = 1/100 (1%)
 Frame = +1

Query: 4   LSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDA 180
           LSSEQ+AK+VD+++RK   PC+EF+ + G VYREH    GYYDGRYW MWKLPMFGC D+
Sbjct: 80  LSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDS 139

Query: 181 AAVLRGIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 300
           + VL+ + EC K YP AFIR++GFD KRQVQ+  F+  KP
Sbjct: 140 SQVLKELEECKKAYPSAFIRIIGFDNKRQVQIISFIAYKP 179


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  137 bits (346), Expect = 2e-32
 Identities = 57/99 (57%), Positives = 75/99 (75%)
 Frame = +1

Query: 4   LSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAA 183
           L+ EQ+ ++VD+++R GW PCIEF K+G VYRE+ +  GYYDGRYW MWKLPMFGC D++
Sbjct: 77  LTREQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSS 136

Query: 184 AVLRGIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 300
            VL+ + EC+K YP+ F R++GFD  RQVQ   FL  KP
Sbjct: 137 QVLKEVDECSKAYPDYFNRIIGFDNTRQVQCISFLTYKP 175


>sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small chain
           PWS4.3, chloroplastic OS=Triticum aestivum PE=3 SV=2
          Length = 174

 Score =  136 bits (342), Expect = 5e-32
 Identities = 57/99 (57%), Positives = 73/99 (73%)
 Frame = +1

Query: 4   LSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAA 183
           LS+E ++KQVD+++R  W PC+EF K+G V+REH    GYYDGRYW MWKLPMFGC DA 
Sbjct: 67  LSTEALSKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDAT 126

Query: 184 AVLRGIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 300
            VL  + E  KEYP+A++RV+GFD  RQVQ   F+  +P
Sbjct: 127 QVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFIAFRP 165


>sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Hordeum vulgare PE=2 SV=1
          Length = 174

 Score =  135 bits (341), Expect = 6e-32
 Identities = 56/99 (56%), Positives = 72/99 (72%)
 Frame = +1

Query: 4   LSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAA 183
           LS+E + KQVD+++R  W PC+EF K+G ++REH    GYYDGRYW MWKLPMFGC DA 
Sbjct: 67  LSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDAT 126

Query: 184 AVLRGIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 300
            VL  + E  KEYP+A++R++GFD  RQVQ   F+  KP
Sbjct: 127 QVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKP 165


>sp|P08474|RBS_CUCSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Cucumis sativus GN=RBCS PE=2 SV=1
          Length = 189

 Score =  135 bits (341), Expect = 6e-32
 Identities = 62/107 (57%), Positives = 80/107 (74%), Gaps = 2/107 (1%)
 Frame = +1

Query: 4   LSSEQIAKQVDFMVRKGWTPCIEFDKIGS--VYREHFHGSGYYDGRYWVMWKLPMFGCQD 177
           +S+EQ++K+ D+++R GW PC+EFD IGS  VYRE+    G+YDGRYW MWKLPMFGC D
Sbjct: 80  MSNEQLSKECDYLLRNGWVPCVEFD-IGSGFVYRENHRSPGFYDGRYWTMWKLPMFGCTD 138

Query: 178 AAAVLRGIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPSV*TFL 318
           ++ V++ I E  KEYP+AFIRV+GFD  RQVQ   F+  KP V  FL
Sbjct: 139 SSQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKPQVLLFL 185


>sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small chain
           PW9, chloroplastic OS=Triticum aestivum PE=3 SV=1
          Length = 175

 Score =  135 bits (341), Expect = 6e-32
 Identities = 57/99 (57%), Positives = 72/99 (72%)
 Frame = +1

Query: 4   LSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAA 183
           LS+E + KQVD+++R  W PC+EF K+G V+REH    GYYDGRYW MWKLPMFGC DA 
Sbjct: 68  LSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDAT 127

Query: 184 AVLRGIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 300
            VL  + E  KEYP+A++RV+GFD  RQVQ   F+  +P
Sbjct: 128 QVLNEVEEVKKEYPDAYVRVIGFDNMRQVQCVSFIAFRP 166


>sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small chain
           2, chloroplastic OS=Spinacia oleracea GN=RBCS2 PE=1 SV=1
          Length = 180

 Score =  135 bits (341), Expect = 6e-32
 Identities = 58/101 (57%), Positives = 75/101 (74%), Gaps = 1/101 (0%)
 Frame = +1

Query: 4   LSSEQIAKQVDFMVRKGWTPCIEFDKI-GSVYREHFHGSGYYDGRYWVMWKLPMFGCQDA 180
           L+++Q+A+QVD+++   W PC+EF+   G VYREH +  GYYDGRYW MWKLPMFGC D 
Sbjct: 78  LTTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDP 137

Query: 181 AAVLRGIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 303
           A VL  + EC KEYP AFIR++GFD+ RQVQ   F+  KP+
Sbjct: 138 AQVLNELEECKKEYPNAFIRIIGFDSNRQVQCVSFIAYKPA 178


>sp|O22573|RBS3_FRIAG Ribulose bisphosphate carboxylase small chain
           3, chloroplastic OS=Fritillaria agrestis GN=RBCS3 PE=2
           SV=1
          Length = 179

 Score =  135 bits (340), Expect = 8e-32
 Identities = 59/99 (59%), Positives = 73/99 (73%)
 Frame = +1

Query: 4   LSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAA 183
           LS E + KQ+++++R GW PC+EF   G V R++    GYYDGRYW MWKLPMFGC DAA
Sbjct: 80  LSVESLLKQIEYLIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAA 139

Query: 184 AVLRGIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 300
            V++  AEC KEYP AFIRV+GFD  RQVQ   F+V+KP
Sbjct: 140 QVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178


>sp|O22572|RBS2_FRIAG Ribulose bisphosphate carboxylase small chain
           2, chloroplastic OS=Fritillaria agrestis GN=RBCS2 PE=2
           SV=1
          Length = 179

 Score =  135 bits (340), Expect = 8e-32
 Identities = 59/99 (59%), Positives = 73/99 (73%)
 Frame = +1

Query: 4   LSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAA 183
           LS E + KQ+++++R GW PC+EF   G V R++    GYYDGRYW MWKLPMFGC DAA
Sbjct: 80  LSVESLLKQIEYLIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAA 139

Query: 184 AVLRGIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 300
            V++  AEC KEYP AFIRV+GFD  RQVQ   F+V+KP
Sbjct: 140 QVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 100
Score (bit) 190.0
E-value 4.0e-47
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944127|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_A24, 5'
         (449 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   190   4e-47
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   142   6e-33
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   142   8e-33
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   142   8e-33
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   140   2e-32
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   140   2e-32
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   140   3e-32
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   140   4e-32
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   139   5e-32
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c...   139   5e-32
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza...   139   5e-32
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c...   139   5e-32
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   139   7e-32
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   137   2e-31
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   137   3e-31
tr|Q9ZRS6|Q9ZRS6_SECCE Ribulose bisphosphate carboxylase small c...   136   5e-31
tr|Q9SNZ6|Q9SNZ6_9POAL Ribulose bisphosphate carboxylase small c...   136   5e-31
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   136   5e-31
tr|Q9SAW7|Q9SAW7_TRITU Ribulose bisphosphate carboxylase small c...   136   6e-31
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   136   6e-31
tr|O20253|O20253_SPIOL Ribulose bisphosphate carboxylase small c...   135   8e-31
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   135   8e-31
tr|Q9ZWH3|Q9ZWH3_9POAL Ribulose bisphosphate carboxylase small c...   135   1e-30
tr|Q9ZWH2|Q9ZWH2_AEGBI Ribulose bisphosphate carboxylase small c...   135   1e-30
tr|Q9ZWH1|Q9ZWH1_AEGSE Ribulose bisphosphate carboxylase small c...   135   1e-30
tr|Q9ZWH0|Q9ZWH0_AEGTA Ribulose bisphosphate carboxylase small c...   135   1e-30
tr|Q9ZWG8|Q9ZWG8_TRITU Ribulose bisphosphate carboxylase small c...   135   1e-30
tr|Q9ZWG7|Q9ZWG7_SECCE Ribulose bisphosphate carboxylase small c...   135   1e-30
tr|Q9ZWG5|Q9ZWG5_9POAL Ribulose bisphosphate carboxylase small c...   135   1e-30
tr|Q9ZWG4|Q9ZWG4_AVESA Ribulose bisphosphate carboxylase small c...   135   1e-30

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  190 bits (482), Expect = 4e-47
 Identities = 85/100 (85%), Positives = 95/100 (95%)
 Frame = +1

Query: 4   LSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAA 183
           L+++QIAKQV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ 
Sbjct: 74  LTNDQIAKQVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSG 133

Query: 184 AVLRGIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 303
           +VLR IAECAKEYP AFIRVLGFDAKRQVQV+GFLV+KPS
Sbjct: 134 SVLREIAECAKEYPTAFIRVLGFDAKRQVQVAGFLVKKPS 173


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  142 bits (359), Expect = 6e-33
 Identities = 60/100 (60%), Positives = 77/100 (77%), Gaps = 1/100 (1%)
 Frame = +1

Query: 4   LSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDA 180
           LS E ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D+
Sbjct: 78  LSDEALSKEIDYLIRNKWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDS 137

Query: 181 AAVLRGIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 300
           A V++ + EC KEYP AFIRV+GFD+ RQVQ   F+V KP
Sbjct: 138 AQVMKEVGECKKEYPNAFIRVIGFDSVRQVQCISFIVSKP 177


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  142 bits (358), Expect = 8e-33
 Identities = 64/103 (62%), Positives = 81/103 (78%), Gaps = 3/103 (2%)
 Frame = +1

Query: 4   LSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQ 174
           L+ +QIAKQVDFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC 
Sbjct: 77  LTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCT 136

Query: 175 DAAAVLRGIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 303
           D+A VLR I EC + +P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 137 DSAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  142 bits (358), Expect = 8e-33
 Identities = 64/103 (62%), Positives = 81/103 (78%), Gaps = 3/103 (2%)
 Frame = +1

Query: 4   LSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQ 174
           L+ +QIAKQVDFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC 
Sbjct: 77  LTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCT 136

Query: 175 DAAAVLRGIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 303
           D+A VLR I EC + +P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 137 DSAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  140 bits (354), Expect = 2e-32
 Identities = 62/103 (60%), Positives = 81/103 (78%), Gaps = 3/103 (2%)
 Frame = +1

Query: 4   LSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQ 174
           L+ +QIAKQVD+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC 
Sbjct: 112 LTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCT 171

Query: 175 DAAAVLRGIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 303
           D++ VLR I EC  ++P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 172 DSSQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 214


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  140 bits (354), Expect = 2e-32
 Identities = 62/103 (60%), Positives = 81/103 (78%), Gaps = 3/103 (2%)
 Frame = +1

Query: 4   LSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQ 174
           L+ +QIAKQVD+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC 
Sbjct: 82  LTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCT 141

Query: 175 DAAAVLRGIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 303
           D++ VLR I EC  ++P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 142 DSSQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 184


>tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small
           chain OS=Panax ginseng PE=2 SV=1
          Length = 183

 Score =  140 bits (353), Expect = 3e-32
 Identities = 59/100 (59%), Positives = 77/100 (77%), Gaps = 1/100 (1%)
 Frame = +1

Query: 4   LSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDA 180
           L+ EQ++K+VD+++R GW PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D+
Sbjct: 79  LTQEQLSKEVDYLLRSGWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDS 138

Query: 181 AAVLRGIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 300
           + VL+ + EC KEYP A+IR++GFD  RQVQ   F+  KP
Sbjct: 139 SQVLKEVEECKKEYPNAYIRIIGFDNVRQVQCISFIAFKP 178


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
           chain OS=Populus trichocarpa PE=2 SV=1
          Length = 170

 Score =  140 bits (352), Expect = 4e-32
 Identities = 59/99 (59%), Positives = 75/99 (75%)
 Frame = +1

Query: 4   LSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAA 183
           LS + IAK++D+M++KGW PC+EFD++GSV REH    GYYDGRYW +WKLPMFGC D++
Sbjct: 70  LSEDSIAKEIDYMMKKGWIPCLEFDEVGSVRREHSRMPGYYDGRYWTLWKLPMFGCTDSS 129

Query: 184 AVLRGIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 300
            VL  I EC K YP+A+IR L FD K Q Q   F++QKP
Sbjct: 130 QVLEEIHECKKAYPDAYIRCLAFDNKHQGQCMAFVIQKP 168


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  139 bits (351), Expect = 5e-32
 Identities = 62/103 (60%), Positives = 80/103 (77%), Gaps = 3/103 (2%)
 Frame = +1

Query: 4   LSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSG---YYDGRYWVMWKLPMFGCQ 174
           LS +QIA+QVD+M+++   PCIEFD +G+V R +F GSG   YYDGRYW MWKLPMFGC 
Sbjct: 82  LSDDQIARQVDYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCT 141

Query: 175 DAAAVLRGIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 303
           D++ VLR I EC   YP  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 142 DSSQVLREIQECKTSYPSCWVRVLGFDSKKQVQICGFLVARPN 184


>tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small
           chain OS=Oryza sativa subsp. japonica GN=P0463E12.1 PE=3
           SV=1
          Length = 183

 Score =  139 bits (351), Expect = 5e-32
 Identities = 57/99 (57%), Positives = 77/99 (77%)
 Frame = +1

Query: 4   LSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAA 183
           LS++ I+K+++F++ KGW PC+EFDK G ++R +    GYYDGRYW +WKLPMFGC DAA
Sbjct: 71  LSAKSISKEIEFIMSKGWVPCLEFDKEGEIHRSNSRMPGYYDGRYWTLWKLPMFGCSDAA 130

Query: 184 AVLRGIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 300
           AVLR + EC +EYP+AFIR++ FD+ RQ Q   F+V KP
Sbjct: 131 AVLREVEECRREYPDAFIRLIAFDSSRQCQCMSFVVHKP 169