DK944128
Clone id YMU02A01NGRL0005_B01
Library
Length 142
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_B01. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GCTTGTCCTTTTTGTAACGGCACCAAGGGATTGCGTATTCAAAAAGCCTCTTCCTTGGTG
TTTTTGTAGGGAGAAATGCTGTTTGAGTAGTAAGTTAAATACCTTGATTTTAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9C0I4
Definition sp|Q9C0I4|THS7B_HUMAN Thrombospondin type-1 domain-containing protein 7B OS=Homo sapiens
Align length 22
Score (bit) 28.9
E-value 8.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944128|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_B01, 5'
(111 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9C0I4|THS7B_HUMAN Thrombospondin type-1 domain-containing pr... 29 8.5

>sp|Q9C0I4|THS7B_HUMAN Thrombospondin type-1 domain-containing
protein 7B OS=Homo sapiens GN=THSD7B PE=2 SV=2
Length = 1608

Score = 28.9 bits (63), Expect = 8.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2

Query: 14 VTAPRDCVFKKPLPWCFCREKC 79
+ PRDCV + LPW C + C
Sbjct: 174 IPCPRDCVVSEFLPWSNCSKGC 195


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944128|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_B01, 5'
(111 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******