DK944131
Clone id YMU02A01NGRL0005_B04
Library
Length 186
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_B04. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GAAGAATGCTCTGGTTTGCCAAAGGAAGTCTACATGAGCTCTTTGTCGATTTCGGGAGCT
TGTGTTTGCCTATCTCTCTGTTCCACCACACAAGTCTTAAGTGATGGTTTTTTGTGATGA
GTAATGAGTATAGTGAAAAATTCTTTGTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
CCATGT
■■Homology search results ■■ -
sp_hit_id Q42374
Definition sp|Q42374|SY111_ARATH Syntaxin-related protein KNOLLE OS=Arabidopsis thaliana
Align length 38
Score (bit) 30.0
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944131|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_B04, 5'
(150 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q42374|SY111_ARATH Syntaxin-related protein KNOLLE OS=Arabido... 30 3.8

>sp|Q42374|SY111_ARATH Syntaxin-related protein KNOLLE
OS=Arabidopsis thaliana GN=KN PE=1 SV=1
Length = 310

Score = 30.0 bits (66), Expect = 3.8
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -2

Query: 146 KEFFTILITHHKKPSLKTCVVEQRDRQTQAPEIDKELM 33
+EF T I H K + VVE +DR A EI+K L+
Sbjct: 193 EEFLTRAIQEHGKGKVLETVVEIQDRYDAAKEIEKSLL 230


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944131|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_B04, 5'
(150 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******