DK944132
Clone id YMU02A01NGRL0005_B05
Library
Length 472
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_B05. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
TATCGTAACGCGTCTCGTTTAGTGTTTAAAGTGTGACTCTCTCTCTCTGATTTTGATTGT
TTAGGAAACATATCTTTATCTTTCTTAAACTGAATGAGATTTTCTTATCTTCTCTCAAAA
TATGTGTTTTCTTATTATTTCTCCGACATTAGATGTATATTAGTCCTTCTCGTCACTCAG
TCATTTCAAAAATTATTTGAGACCCTGACAAATCCTAGTTGTTTTTGCACCCCCCGAGAT
AATTGGTTTAGTTTCTACTTCCGGGGAGGATCATCAAAGAAAACTATCTCTGCGTCGACG
TCTCACATAGATGACTCCTCGTCACTAAACCTCAAATAATAAATCTGGGATATATAGTTG
TAATAGATCATTCCGGTTTTGTCACGATAATCGTCCATCTATCTGCTTGAACAGAATCCC
TCGTTTCAACAACTCTTCGTGATATATTTCCCTAAGGGTTTTTTCCTGACAT
■■Homology search results ■■ -
sp_hit_id Q7Z401
Definition sp|Q7Z401|MYCPP_HUMAN C-myc promoter-binding protein OS=Homo sapiens
Align length 40
Score (bit) 31.2
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944132|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_B05, 5'
(472 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7Z401|MYCPP_HUMAN C-myc promoter-binding protein OS=Homo sap... 31 2.4
sp|O13999|MU155_SCHPO Meiotically up-regulated gene 155 protein ... 30 5.4

>sp|Q7Z401|MYCPP_HUMAN C-myc promoter-binding protein OS=Homo
sapiens GN=DENND4A PE=1 SV=2
Length = 1863

Score = 31.2 bits (69), Expect = 2.4
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = -3

Query: 386 RDKTGMIYYNYISQIY-YLRFSDEESSM*DVDAEIVFFDD 270
RD++ +YN +++ ++RF +E S + D DA + FFDD
Sbjct: 608 RDRSHQKFYNMMTKTQMFIRFIEECSFVSDKDASLAFFDD 647


>sp|O13999|MU155_SCHPO Meiotically up-regulated gene 155 protein
OS=Schizosaccharomyces pombe GN=mug155 PE=1 SV=1
Length = 187

Score = 30.0 bits (66), Expect = 5.4
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +1

Query: 97 RFSYLLSKYVFSYYFSDIRCILVLLVTQSFQKLFETLTNPSCFCT 231
+F LSK + SY+F I+VLL+ F L L PS F T
Sbjct: 74 KFIKSLSKKIISYHFISFHTIVVLLLLPPFSHLL-VLVYPSVFTT 117


tr_hit_id A0DBS1
Definition tr|A0DBS1|A0DBS1_PARTE Chromosome undetermined scaffold_44, whole genome shotgun sequence OS=Paramecium tetraurelia
Align length 63
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944132|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_B05, 5'
(472 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A0DBS1|A0DBS1_PARTE Chromosome undetermined scaffold_44, whol... 35 2.4
tr|Q4YRT3|Q4YRT3_PLABE Putative uncharacterized protein (Fragmen... 34 4.2
tr|Q7RCD2|Q7RCD2_PLAYO Putative uncharacterized protein PY05852 ... 33 5.4
tr|A0YNQ1|A0YNQ1_9CYAN ABC transporter-like protein OS=Lyngbya s... 33 5.5

>tr|A0DBS1|A0DBS1_PARTE Chromosome undetermined scaffold_44, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00015385001 PE=4 SV=1
Length = 3010

Score = 34.7 bits (78), Expect = 2.4
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +1

Query: 94 MRFSYLLSKYVFSYYFSDIRCILVLLVTQSFQKLFETLTNPSCFCTPRDNWFSFYFRGGS 273
++F + L+ F+ FSD C+L+ L Q++Q L + NPSC+ P D+ R G+
Sbjct: 1714 VKFDFTLNPQFFTTQFSDNVCLLI-LEKQTYQSLGK---NPSCYIDPADD-TKLILRVGN 1768

Query: 274 SKK 282
S K
Sbjct: 1769 SPK 1771


>tr|Q4YRT3|Q4YRT3_PLABE Putative uncharacterized protein (Fragment)
OS=Plasmodium berghei GN=PB000122.03.0 PE=4 SV=1
Length = 249

Score = 33.9 bits (76), Expect = 4.2
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +1

Query: 115 SKYVFSYYFSDIRCILVLLVTQSFQKLFETLTNPSCFCTPRDNWFSFY 258
SK + SYY I C+ + L + + L TLT S C+ +N F+FY
Sbjct: 163 SKEIKSYYNKIIDCVFLCLKNEDNKVLVLTLTVISAMCSTVENKFNFY 210


>tr|Q7RCD2|Q7RCD2_PLAYO Putative uncharacterized protein PY05852
OS=Plasmodium yoelii yoelii GN=PY05852 PE=4 SV=1
Length = 616

Score = 33.5 bits (75), Expect = 5.4
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1

Query: 115 SKYVFSYYFSDIRCILVLLVTQSFQKLFETLTNPSCFCTPRDNWFSFY 258
SK + SYY I C+ + L + + L TLT S C+ +N F FY
Sbjct: 230 SKEIKSYYNKIIDCVFLCLKNEDNKVLVLTLTVISAMCSTVENKFDFY 277


>tr|A0YNQ1|A0YNQ1_9CYAN ABC transporter-like protein OS=Lyngbya sp.
PCC 8106 GN=L8106_12765 PE=3 SV=1
Length = 315

Score = 33.5 bits (75), Expect = 5.5
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = -3

Query: 389 YRDKTGMIYYNYISQIYYLRFSDEESSM*DVDAEIVFFDDPPRK*KLNQLSRGVQKQLGF 210
Y D T Y +Y +++YYLR + DV E+V + RK +++ LSRG++++L
Sbjct: 92 YNDLTVWDYLDYFARLYYLREPKRSRRLYDV-LELVQLSN-KRKSQISTLSRGMKQRLSL 149

Query: 209 VR 204
R
Sbjct: 150 AR 151